RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 FGF6P10767 208 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 COX7CP15954 63 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 CSN1S1P47710 185 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 C6orf99Q4VX62 202 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 TCF23Q7RTU1 214 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 C11orf53Q8IXP5 236 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 ABCA7Q8IZY2 2146 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 H1FXQ92522 213 aaKnown RBP2.49□□□□□ -2.01
CSMD3-210ENST00000534172 ABHD14BQ96IU4 210 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 CARD19Q96LW7 228 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 PLA2G2FQ9BZM2 168 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 ADAMTS9Q9P2N4 1935 aa2.49□□□□□ -2.01
CSMD3-210ENST00000534172 SCN10AQ9Y5Y9 1956 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 TRAV26-2A0A0B4J265 109 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 A0A1B0GVY2 172 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 RBAKDNA6NC62 111 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 FAM24AA6NFZ4 105 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 PDCD6O75340 191 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 HLA-DMBP28068 263 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 PSMB2P49721 201 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 KRTAP10-5P60370 271 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 RPS11P62280 158 aaKnown RBP eCLIP2.48□□□□□ -2.01
CSMD3-210ENST00000534172 IGFL2Q6UWQ7 119 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 LHFPL1Q86WI0 220 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 SBSPONQ8IVN8 264 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 OR10AC1Q8NH08 325 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 COPS9Q8WXC6 57 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 CCL17Q92583 94 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 FGF13Q92913 245 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 CHCHD1Q96BP2 118 aaKnown RBP2.48□□□□□ -2.01
CSMD3-210ENST00000534172 AGPAT4-IT1Q9H0P7 198 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 MED13LQ71F56 2210 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 SCN2AQ99250 2005 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 IGHV1-24A0A0C4DH33 117 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 MYBPHLA2RUH7 354 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 A8MWV9 139 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 SSSCA1O60232 199 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 PYYP10082 97 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 FKBP2P26885 142 aaKnown RBP2.48□□□□□ -2.01
CSMD3-210ENST00000534172 CCL23P55773 120 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 FAM201AQ5SY85 155 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 LINC01545Q5VT33 79 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 AMN1Q8IY45 258 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 FXYD5Q96DB9 178 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 TXNDC17Q9BRA2 123 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 ZNF331Q9NQX6 463 aaPredicted RBP2.48□□□□□ -2.01
CSMD3-210ENST00000534172 RBM12B-AS1Q9P1G2 102 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 TLN1Q9Y490 2541 aaKnown RBP2.48□□□□□ -2.01
CSMD3-210ENST00000534172 AKAP13Q12802 2813 aa2.48□□□□□ -2.01
CSMD3-210ENST00000534172 IGKV1-27A0A075B6S5 117 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 TRAV2A0A0B4J234 112 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 FAM168BA1KXE4 195 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 KLLNB2CW77 178 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 J3QLW9 94 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 FFAR1O14842 300 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 SCGB1C2P0DMR2 95 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 HLA-DRB4P13762 266 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 C14orf178Q8N769 122 aaPredicted RBP2.47□□□□□ -2.01
CSMD3-210ENST00000534172 C15orf53Q8NAA6 179 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 BORCS8Q96FH0 119 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 SHANK2-AS3Q9BTD1 123 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 TMEM243Q9BU79 118 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 CKLFQ9UBR5 152 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 LY96Q9Y6Y9 160 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 HLA-DRB4X5D2U9 266 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 MYO15AQ9UKN7 3530 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 TRAV12-2A0A075B6T6 113 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 PSPHP1O15172 72 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 PIN1P1O15428 100 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 LEPROTL1O95214 131 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 IGHG2P01859 326 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 CD7P09564 240 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 FXYD6P3P58550 94 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 SERF2P84101 59 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 C12orf74Q32Q52 190 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 Q6P435 159 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 C22orf39Q6P5X5 142 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 HMGN2P46Q86SG4 172 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 FAM19A2Q8N3H0 131 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 CD177Q8N6Q3 437 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 C3orf56Q8N813 242 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 LINC01555Q8NAE3 123 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 SLC25A2Q9BXI2 301 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 ATG2BQ96BY7 2078 aa2.47□□□□□ -2.01
CSMD3-210ENST00000534172 TRIOO75962 3097 aa2.46□□□□□ -2.01
CSMD3-210ENST00000534172 ASPMQ8IZT6 3477 aa2.46□□□□□ -2.01
CSMD3-210ENST00000534172 F8P00451 2351 aa2.46□□□□□ -2.01
CSMD3-210ENST00000534172 A8MU10 97 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 ATOX1O00244 68 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 PEX7O00628 323 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 LYZL6O75951 148 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 IGKCP01834 107 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 PEBP1P30086 187 aaKnown RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 SUPT4H1P63272 117 aaKnown RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 IGLV3-21P80748 117 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-210ENST00000534172 Q6ZQT7 251 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 Q6ZRU5 148 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 C6orf201Q7Z4U5 140 aa2.46□□□□□ -2.02
CSMD3-210ENST00000534172 LINC00337Q8N6G1 96 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms