RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZNF266Q14584 549 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 ARL6IP1Q15041 203 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 TMEM41BQ5BJD5 291 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 SPINK9Q5DT21 86 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 OR8G2PQ6IF36 304 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 NFE4Q86UQ8 179 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 H1FOOQ8IZA3 346 aaPredicted RBP1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 LINC00469Q8N7U9 141 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 SLC35G3Q8N808 338 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 ZNF709Q8N972 641 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 THAP8Q8NA92 274 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 NHLRC2Q8NBF2 726 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 OR5C1Q8NGR4 320 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 OR10J5Q8NHC4 309 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 RPUSD4Q96CM3 377 aaKnown RBP1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 TVP23CQ96ET8 276 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 GINS3Q9BRX5 216 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 OR51M1Q9H341 326 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 RIMS4Q9H426 269 aaPredicted RBP1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 SLC25A22Q9H936 323 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 PSENENQ9NZ42 101 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 MRPL36Q9P0J6 103 aaKnown RBP1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 TRAV2A0A0B4J234 112 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 PLAC8L1A1L4L8 177 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 XKRY2A2RUG3 117 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 MAP1LC3B2A6NCE7 125 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 HELTA6NFD8 242 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 F6UZH7 168 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 PHOX2AO14813 284 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 GATCO43716 136 aaKnown RBP1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 MT-CO2P00403 227 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 PPYP01298 95 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 IGLV2-8P01709 118 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 TRGC2P03986 189 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 SRP19P09132 144 aaKnown RBP1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 METTL15P1P0C7V9 234 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 NPPCP23582 126 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 GALR1P47211 349 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 CCL20P78556 96 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 EIF4EBP1Q13541 118 aaPredicted RBP1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 SURF2Q15527 256 aaPredicted RBP1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 KHDC3LQ587J8 217 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 TTC32Q5I0X7 151 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 SPANXN5Q5MJ07 72 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 MOB1BQ7L9L4 216 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 OR4B1Q8NGF8 309 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 OCC1Q8TAD7 63 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 Q8WTZ3 238 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 GNPNAT1Q96EK6 184 aaPredicted RBP1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 ADTRPQ96IZ2 230 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 SMIM8Q96KF7 97 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 PACRGQ96M98 296 aaPredicted RBP1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 TP53RKQ96S44 253 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 ATP5SQ99766 215 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 SMIM7Q9BQ49 75 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 CABLES2Q9BTV7 478 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 RSG1Q9BU20 258 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 TMEM70Q9BUB7 260 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 GGACTQ9BVM4 153 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 COMMD5Q9GZQ3 224 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 MAP1LC3BQ9GZQ8 125 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 CCL28Q9NRJ3 127 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 NDUFA4L2Q9NRX3 87 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 THYN1Q9P016 225 aa1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 F11RQ9Y624 299 aaKnown RBP1.97□□□□□ -2.09
CHMP4A-208ENST00000534106 A0A096LPF7 62 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 LRCOL1A6NCL2 159 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 H7BYZ3 331 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 GNG7O60262 68 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 NXPH4O95158 308 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM50AO95807 157 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 ATP5G1P05496 136 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 CD5P06127 495 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 PRSS1P07477 247 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 SNRPCP09234 159 aaKnown RBP1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 SEC11BP0C7V7 166 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 TRGC1P0CF51 173 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 BCL2P10415 239 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 SLC25A6P12236 298 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 HLA-DRB4P13762 266 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 HTN1P15515 57 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 DTYMKP23919 212 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 CRYBB3P26998 211 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 ATP5G3P48201 142 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 PSMB3P49720 205 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 RAB4BP61018 213 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 RND3P61587 244 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 PKIAP61925 76 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 NUTF2P61970 127 aaKnown RBP1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 HBG1P69891 147 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 HBG2P69892 147 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 PSG9Q00887 426 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 SLC38A11Q08AI6 406 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 GAMTQ14353 236 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 WFDC2Q14508 124 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 RRN3P1Q2M238 152 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 TIGITQ495A1 244 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 ZNF506Q5JVG8 444 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 FFAR4Q5NUL3 377 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 C10orf91Q5T1B1 145 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms