RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 VMA21Q3ZAQ7 101 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 Q6Q795 121 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 LCN15Q6UWW0 184 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 OR8D4Q8NGM9 314 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 ZNF721Q8TF20 911 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 PSMF1Q92530 271 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 MRPS24Q96EL2 167 aaKnown RBP2.89□□□□□ -1.95
ATM-223ENST00000533979 BORCS8Q96FH0 119 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 CIB3Q96Q77 187 aaPredicted RBP2.89□□□□□ -1.95
ATM-223ENST00000533979 VAMP8Q9BV40 100 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 RTL8AQ9BWD3 113 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 GABARAPL1Q9H0R8 117 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 ATG5Q9H1Y0 275 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 CCDC167Q9P0B6 97 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 AK3Q9UIJ7 227 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 PCTPQ9UKL6 214 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 FUT9Q9Y231 359 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 ZNF443Q9Y2A4 671 aaPredicted RBP2.89□□□□□ -1.95
ATM-223ENST00000533979 PHLDA3Q9Y5J5 127 aa2.89□□□□□ -1.95
ATM-223ENST00000533979 SDK2Q58EX2 2172 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 COL27A1Q8IZC6 1860 aaPredicted RBP2.88□□□□□ -1.95
ATM-223ENST00000533979 ANKRD36A6QL64 1941 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 A0A087X0T9 212 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 A8MWP4 228 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 GABARAPH6UMI1 98 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 PGLYRP1O75594 196 aaPredicted RBP2.88□□□□□ -1.95
ATM-223ENST00000533979 TNFP01375 233 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 TRGV3P03979 118 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 IGLC1P0CG04 106 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 FKBP2P26885 142 aaKnown RBP2.88□□□□□ -1.95
ATM-223ENST00000533979 MPV17P39210 176 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 AQP4P55087 323 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 RTL8BQ17RB0 113 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 KHDC3LQ587J8 217 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 C10orf91Q5T1B1 145 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 ALKAL2Q6UX46 152 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 LHFPL1Q86WI0 220 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 GPHB5Q86YW7 130 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 HIST3H2BBQ8N257 126 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 RAB2BQ8WUD1 216 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 ERMAPQ96PL5 475 aaPredicted RBP2.88□□□□□ -1.95
ATM-223ENST00000533979 SDF2Q99470 211 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 SMR3AQ99954 134 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 IMUPQ9GZP8 106 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 WDR61Q9GZS3 305 aaKnown RBP2.88□□□□□ -1.95
ATM-223ENST00000533979 BANF2Q9H503 90 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 FBXL12Q9NXK8 326 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 FKBP11Q9NYL4 201 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 AMMECR1Q9Y4X0 333 aaPredicted RBP2.88□□□□□ -1.95
ATM-223ENST00000533979 MPC1Q9Y5U8 109 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 BSNQ9UPA5 3926 aa2.88□□□□□ -1.95
ATM-223ENST00000533979 ZFC3H1O60293 1989 aaKnown RBP2.87□□□□□ -1.95
ATM-223ENST00000533979 UNC13CQ8NB66 2214 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 A0A087WXM4 84 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 LY6LH3BQJ8 138 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 IGKV1D-33P01593 117 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 IGKV1-33P01594 117 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 INAFM2P0DMQ5 153 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 IFITM1P13164 125 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 MSMO1Q15800 293 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 C22orf39Q6P5X5 142 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 SSX8Q7RTT4 187 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 SCXQ7RTU7 201 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 PRR15Q8IV56 129 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 ZFAND2AQ8N6M9 145 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 LMX1AQ8TE12 382 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 MCEEQ96PE7 176 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 SNRNP25Q9BV90 132 aaKnown RBP2.87□□□□□ -1.95
ATM-223ENST00000533979 AICDAQ9GZX7 198 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 DUSP21Q9H596 190 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 NOP16Q9Y3C1 178 aaKnown RBP2.87□□□□□ -1.95
ATM-223ENST00000533979 NUP214P35658 2090 aaPredicted RBP2.87□□□□□ -1.95
ATM-223ENST00000533979 TLN2Q9Y4G6 2542 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 MYLKQ15746 1914 aa2.87□□□□□ -1.95
ATM-223ENST00000533979 RER1O15258 196 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 KLF7O75840 302 aaPredicted RBP2.86□□□□□ -1.95
ATM-223ENST00000533979 LINC00032P0C843 101 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 PSMB8P28062 276 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 FOXA3P55318 350 aaPredicted RBP2.86□□□□□ -1.95
ATM-223ENST00000533979 TAS2R45P59539 299 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 RPS11P62280 158 aaKnown RBP eCLIP2.86□□□□□ -1.95
ATM-223ENST00000533979 PLGLB1Q02325 96 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 AKR1C1Q04828 323 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 ZNF816Q0VGE8 651 aaPredicted RBP2.86□□□□□ -1.95
ATM-223ENST00000533979 KLRD1Q13241 179 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 DEFB109BQ30KR1 87 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 MRPL54Q6P161 138 aaKnown RBP2.86□□□□□ -1.95
ATM-223ENST00000533979 C16orf47Q6ZP98 133 aaPredicted RBP2.86□□□□□ -1.95
ATM-223ENST00000533979 LINC00471Q8N535 108 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 KCNRGQ8N5I3 272 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 BPIFB6Q8NFQ5 453 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 OR4K13Q8NH42 304 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 OR5AK2Q8NH90 309 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 UBALD1Q8TB05 177 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 RPS4Y2Q8TD47 263 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 ZNF431Q8TF32 576 aaPredicted RBP2.86□□□□□ -1.95
ATM-223ENST00000533979 GPX7Q96SL4 187 aaPredicted RBP2.86□□□□□ -1.95
ATM-223ENST00000533979 ASF1BQ9NVP2 202 aa2.86□□□□□ -1.95
ATM-223ENST00000533979 MARCOQ9UEW3 520 aaPredicted RBP2.86□□□□□ -1.95
ATM-223ENST00000533979 LINC00588Q9Y4M8 146 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms