RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 C21orf62-AS1Q17RA5 79 aa8.58□□□□□ -1.04
CAPRIN1-213ENST00000533562 KHDC3LQ587J8 217 aa8.58□□□□□ -1.04
CAPRIN1-213ENST00000533562 OR11H4Q8NGC9 324 aa8.58□□□□□ -1.04
CAPRIN1-213ENST00000533562 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
CAPRIN1-213ENST00000533562 A0A0D9SG52 128 aa8.57□□□□□ -1.04
CAPRIN1-213ENST00000533562 APOC3P02656 99 aa8.57□□□□□ -1.04
CAPRIN1-213ENST00000533562 RPL35P42766 123 aaKnown RBP8.57□□□□□ -1.04
CAPRIN1-213ENST00000533562 ZNF266Q14584 549 aa8.57□□□□□ -1.04
CAPRIN1-213ENST00000533562 LBHQ53QV2 105 aaPredicted RBP8.57□□□□□ -1.04
CAPRIN1-213ENST00000533562 PRR9Q5T870 116 aa8.57□□□□□ -1.04
CAPRIN1-213ENST00000533562 PRO0255Q9UI72 69 aa8.57□□□□□ -1.04
CAPRIN1-213ENST00000533562 HHLA3Q9XRX5 114 aa8.57□□□□□ -1.04
CAPRIN1-213ENST00000533562 LENEPQ9Y5L5 61 aa8.57□□□□□ -1.04
CAPRIN1-213ENST00000533562 DIRC3C9JPN6 131 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 ZNF415Q09FC8 603 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 FAM74A1Q5RGS3 127 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 DNLZQ5SXM8 178 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 Q6ZQT7 251 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 Q8TAT8 98 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 CMTM2Q8TAZ6 248 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 SFT2D1Q8WV19 159 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 SMIM3Q9BZL3 60 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 MRPL16Q9NX20 251 aaKnown RBP8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 ICOSQ9Y6W8 199 aa8.56□□□□□ -1.04
CAPRIN1-213ENST00000533562 A0A1W2PPV4 95 aa8.55□□□□□ -1.04
CAPRIN1-213ENST00000533562 SIVA1O15304 175 aa8.55□□□□□ -1.04
CAPRIN1-213ENST00000533562 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
CAPRIN1-213ENST00000533562 ACOT6Q3I5F7 207 aaPredicted RBP8.55□□□□□ -1.04
CAPRIN1-213ENST00000533562 FAM159AQ6UWV7 190 aa8.55□□□□□ -1.04
CAPRIN1-213ENST00000533562 TMUB2Q71RG4 321 aa8.55□□□□□ -1.04
CAPRIN1-213ENST00000533562 ARL6IP6Q8N6S5 226 aa8.55□□□□□ -1.04
CAPRIN1-213ENST00000533562 TMED6Q8WW62 240 aa8.55□□□□□ -1.04
CAPRIN1-213ENST00000533562 KRTAP1-5Q9BYS1 174 aa8.55□□□□□ -1.04
CAPRIN1-213ENST00000533562 PGPA6NDG6 321 aa8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 CDK2AP2O75956 126 aa8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 CRYBA4P53673 196 aa8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 MRPL23Q16540 153 aaKnown RBP8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 MUC21Q5SSG8 566 aa8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 Q6AWC8 147 aa8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 PQLC2Q6ZP29 291 aa8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 SPXQ9BT56 116 aa8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 OTORQ9NRC9 128 aa8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 MDFICQ9P1T7 246 aa8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 CARHSP1Q9Y2V2 147 aaKnown RBP8.54□□□□□ -1.04
CAPRIN1-213ENST00000533562 TRGV11A0A075B6L2 103 aa8.53□□□□□ -1.04
CAPRIN1-213ENST00000533562 TRGV4A0A0C4DH28 118 aa8.53□□□□□ -1.04
CAPRIN1-213ENST00000533562 EIF4EBP3O60516 100 aaPredicted RBP8.53□□□□□ -1.04
CAPRIN1-213ENST00000533562 FHL2Q14192 279 aa8.53□□□□□ -1.04
CAPRIN1-213ENST00000533562 ZNF345Q14585 488 aa8.53□□□□□ -1.04
CAPRIN1-213ENST00000533562 SPATA12Q7Z6I5 190 aa8.53□□□□□ -1.04
CAPRIN1-213ENST00000533562 RASL10AQ92737 203 aa8.53□□□□□ -1.04
CAPRIN1-213ENST00000533562 C8orf49Q96NF6 230 aa8.53□□□□□ -1.04
CAPRIN1-213ENST00000533562 LRP1BQ9NZR2 4599 aa8.53□□□□□ -1.04
CAPRIN1-213ENST00000533562 TRAV9-2A0A087WT02 112 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 TMEM218A2RU14 115 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 C1orf196B1AJZ1 125 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 NXPH4O95158 308 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 TMEM183BQ1AE95 376 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 TDRG1Q3Y452 100 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 NEGR1Q7Z3B1 354 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 TMEM183AQ8IXX5 376 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 WFDC1Q9HC57 220 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 HSPG2P98160 4391 aa8.52□□□□□ -1.05
CAPRIN1-213ENST00000533562 TRAV21A0A0B4J279 112 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 LINC00315P59091 139 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 C10orf91Q5T1B1 145 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 GOLT1AQ6ZVE7 132 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 C15orf54Q8N8G6 183 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 OR10G4Q8NGN3 311 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 OR10G9Q8NGN4 311 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 OR10G7Q8NGN6 311 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 NAGKQ9UJ70 344 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 RPH3ALQ9UNE2 315 aa8.51□□□□□ -1.05
CAPRIN1-213ENST00000533562 KANTRA0A1W2PQU2 76 aa8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 EIF3GO75821 320 aaKnown RBP eCLIP8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 ORM1P02763 201 aa8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 SRIP30626 198 aa8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 RAB2AP61019 212 aa8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 PCNPQ8WW12 178 aaKnown RBP8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 ZNF479Q96JC4 524 aa8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 SEC11CQ9BY50 192 aa8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 TREM1Q9NP99 234 aa8.5□□□□□ -1.05
CAPRIN1-213ENST00000533562 G3V3Q6 166 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 K7EP13 123 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 K7EQD1 137 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 M0R2P5 195 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 HMGB3O15347 200 aaKnown RBP8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 GNRH2O43555 120 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 SFTA3P0C7M3 94 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 RAB4AP20338 218 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 RAB5CP51148 216 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 EIF5AP63241 154 aaKnown RBP8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 OR4C5Q8NGB2 326 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 KCNS1Q96KK3 526 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
CAPRIN1-213ENST00000533562 ABCA13Q86UQ4 5058 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms