RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 CCDC140Q96MF4 163 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 TRAV13-1A0A0B4J241 112 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 C9JQL5 133 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 SNAI2O43623 268 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 IGF1P05019 195 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 IGKV1OR2-108A0A075B7D4 117 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 LAGE3Q14657 143 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 DNLZQ5SXM8 178 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 CXCL1P09341 107 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 ESM1Q9NQ30 184 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 VWC2Q2TAL6 325 aa12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 HECTD1Q9ULT8 2610 aa12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 K7EMT4 169 aa12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 RNASE1P07998 156 aaKnown RBP12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 IGLL1P15814 213 aa12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 DEFB125Q8N687 156 aa12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 A8MWV9 139 aa12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 Q6ZS46 218 aa12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 PAX4O43316 350 aa12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 ZNF25P17030 456 aaPredicted RBP12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 U3KQE9 123 aa12.1□□□□□ -0.47
PPFIA1-222ENST00000532504 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
PPFIA1-222ENST00000532504 TMEM170AQ8WVE7 144 aa12.09□□□□□ -0.47
PPFIA1-222ENST00000532504 TRAV26-2A0A0B4J265 109 aa12.08□□□□□ -0.48
PPFIA1-222ENST00000532504 PSMG3-AS1Q96PY0 264 aa12.08□□□□□ -0.48
PPFIA1-222ENST00000532504 ZNF492Q9P255 531 aa12.08□□□□□ -0.48
PPFIA1-222ENST00000532504 INSL3P51460 131 aa12.08□□□□□ -0.48
PPFIA1-222ENST00000532504 DMRT1Q9Y5R6 373 aa12.08□□□□□ -0.48
PPFIA1-222ENST00000532504 NACAE9PAV3 2078 aa12.08□□□□□ -0.48
PPFIA1-222ENST00000532504 ZNF702PQ9H963 129 aa12.08□□□□□ -0.48
PPFIA1-222ENST00000532504 WI2-2373I1.2A0A1W2PRP0 233 aa12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 PYGO2Q9BRQ0 406 aa12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 EBI3Q14213 229 aa12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 OR2K2Q8NGT1 345 aa12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 PRAC2D3DTV9 90 aa12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 CRLF1O75462 422 aa12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 FOSL1P15407 271 aa12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 SMIM12Q96EX1 92 aa12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 MRPL53Q96EL3 112 aaKnown RBP12.07□□□□□ -0.48
PPFIA1-222ENST00000532504 MORN3Q6PF18 240 aaPredicted RBP12.06□□□□□ -0.48
PPFIA1-222ENST00000532504 TMEM242Q9NWH2 141 aa12.06□□□□□ -0.48
PPFIA1-222ENST00000532504 LYRM7Q5U5X0 104 aa12.06□□□□□ -0.48
PPFIA1-222ENST00000532504 SPXQ9BT56 116 aa12.06□□□□□ -0.48
PPFIA1-222ENST00000532504 TRAV25A0A0B4J276 109 aa12.06□□□□□ -0.48
PPFIA1-222ENST00000532504 A6NDN8 102 aa12.06□□□□□ -0.48
PPFIA1-222ENST00000532504 INS-IGF2F8WCM5 200 aa12.06□□□□□ -0.48
PPFIA1-222ENST00000532504 NEGR1Q7Z3B1 354 aa12.06□□□□□ -0.48
PPFIA1-222ENST00000532504 CHTOPQ9Y3Y2 248 aaKnown RBP12.06□□□□□ -0.48
PPFIA1-222ENST00000532504 TEX43Q6ZNM6 134 aa12.05□□□□□ -0.48
PPFIA1-222ENST00000532504 IFI27L1Q96BM0 104 aa12.05□□□□□ -0.48
PPFIA1-222ENST00000532504 M0R2P5 195 aa12.05□□□□□ -0.48
PPFIA1-222ENST00000532504 SMIM6P0DI80 62 aa12.05□□□□□ -0.48
PPFIA1-222ENST00000532504 TMEM256Q8N2U0 113 aa12.05□□□□□ -0.48
PPFIA1-222ENST00000532504 TMEM238LA0A1B0GVL6 79 aa12.05□□□□□ -0.48
PPFIA1-222ENST00000532504 A6NJY4 79 aa12.05□□□□□ -0.48
PPFIA1-222ENST00000532504 GAGE6Q13070 117 aa12.05□□□□□ -0.48
PPFIA1-222ENST00000532504 CKS1BP61024 79 aa12.05□□□□□ -0.48
PPFIA1-222ENST00000532504 TRBV24-1A0A075B6N3 115 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 LOC107984156A0A0G2JMH3 177 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 VWC2LB2RUY7 222 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 TNFRSF6BO95407 300 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 ARL17AQ8IVW1 177 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 SPART-AS1P0CW21 52 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 TRBV25-1A0A075B6N4 114 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 PRSS46E5RG02 174 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 GFRA4Q9GZZ7 299 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 C18orf65Q6ZTR6 163 aa12.04□□□□□ -0.48
PPFIA1-222ENST00000532504 EGR2P11161 476 aaPredicted RBP12.03□□□□□ -0.48
PPFIA1-222ENST00000532504 HINT1P49773 126 aaPredicted RBP12.03□□□□□ -0.48
PPFIA1-222ENST00000532504 RASL11AQ6T310 242 aa12.03□□□□□ -0.48
PPFIA1-222ENST00000532504 COPS9Q8WXC6 57 aa12.03□□□□□ -0.48
PPFIA1-222ENST00000532504 PLP1P60201 277 aa12.03□□□□□ -0.48
PPFIA1-222ENST00000532504 C14orf144Q96I85 54 aa12.02□□□□□ -0.48
PPFIA1-222ENST00000532504 SDHAF1A6NFY7 115 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST1H2BKO60814 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST1H2BJP06899 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 P0C879 139 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 ADCYAP1P18509 176 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST1H2BOP23527 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST1H2BBP33778 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST1H2BDP58876 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST1H2BCP62807 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST2H2BEQ16778 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST1H2BHQ93079 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST1H2BNQ99877 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 HIST1H2BMQ99879 126 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 CRYGBP07316 175 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 PTPRBP23467 1997 aa12.02□□□□□ -0.49
PPFIA1-222ENST00000532504 DPM2O94777 84 aa12.01□□□□□ -0.49
PPFIA1-222ENST00000532504 LTAP01374 205 aa12.01□□□□□ -0.49
PPFIA1-222ENST00000532504 JOSD1Q15040 202 aaPredicted RBP12.01□□□□□ -0.49
PPFIA1-222ENST00000532504 SS18Q15532 418 aa12.01□□□□□ -0.49
PPFIA1-222ENST00000532504 ADAMTSL5Q6ZMM2 481 aa12.01□□□□□ -0.49
PPFIA1-222ENST00000532504 MAP6D1Q9H9H5 199 aa12.01□□□□□ -0.49
PPFIA1-222ENST00000532504 KMT2EQ8IZD2 1858 aa12.01□□□□□ -0.49
PPFIA1-222ENST00000532504 RBAKDNA6NC62 111 aa12□□□□□ -0.49
PPFIA1-222ENST00000532504 COX6CP09669 75 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms