RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 WFDC1Q9HC57 220 aa9.04□□□□□ -0.96
AMBRA1-210ENST00000531542 MSRB1Q9NZV6 116 aa9.04□□□□□ -0.96
AMBRA1-210ENST00000531542 A0A087WTM6 91 aa9.03□□□□□ -0.96
AMBRA1-210ENST00000531542 GOLT1AQ6ZVE7 132 aa9.03□□□□□ -0.96
AMBRA1-210ENST00000531542 C10orf126Q8N4M7 172 aa9.03□□□□□ -0.96
AMBRA1-210ENST00000531542 OR4C5Q8NGB2 326 aa9.03□□□□□ -0.96
AMBRA1-210ENST00000531542 OR2G3Q8NGZ4 309 aa9.03□□□□□ -0.96
AMBRA1-210ENST00000531542 SUN5Q8TC36 379 aa9.03□□□□□ -0.96
AMBRA1-210ENST00000531542 TVP23CQ96ET8 276 aa9.03□□□□□ -0.96
AMBRA1-210ENST00000531542 SMIM3Q9BZL3 60 aa9.03□□□□□ -0.96
AMBRA1-210ENST00000531542 TREM1Q9NP99 234 aa9.03□□□□□ -0.96
AMBRA1-210ENST00000531542 GNRH2O43555 120 aa9.02□□□□□ -0.97
AMBRA1-210ENST00000531542 WFDC10BQ8IUB3 73 aa9.02□□□□□ -0.97
AMBRA1-210ENST00000531542 PTH2Q96A98 100 aa9.02□□□□□ -0.97
AMBRA1-210ENST00000531542 SDF2L1Q9HCN8 221 aa9.02□□□□□ -0.97
AMBRA1-210ENST00000531542 TNFRSF18Q9Y5U5 241 aa9.02□□□□□ -0.97
AMBRA1-210ENST00000531542 TYMSP04818 313 aa9.01□□□□□ -0.97
AMBRA1-210ENST00000531542 STAG3L2P0CL84 134 aa9.01□□□□□ -0.97
AMBRA1-210ENST00000531542 STAG3L3P0CL85 134 aa9.01□□□□□ -0.97
AMBRA1-210ENST00000531542 GATA1P15976 413 aaPredicted RBP9.01□□□□□ -0.97
AMBRA1-210ENST00000531542 RAB2AP61019 212 aa9.01□□□□□ -0.97
AMBRA1-210ENST00000531542 OR10G9Q8NGN4 311 aa9.01□□□□□ -0.97
AMBRA1-210ENST00000531542 OR10G7Q8NGN6 311 aa9.01□□□□□ -0.97
AMBRA1-210ENST00000531542 PSMG3Q9BT73 122 aaPredicted RBP9.01□□□□□ -0.97
AMBRA1-210ENST00000531542 NAGKQ9UJ70 344 aa9.01□□□□□ -0.97
AMBRA1-210ENST00000531542 TRAV8-1A0A0A6YYK1 113 aa9□□□□□ -0.97
AMBRA1-210ENST00000531542 FBLL1A6NHQ2 334 aaKnown RBP9□□□□□ -0.97
AMBRA1-210ENST00000531542 SERF2P84101 59 aa9□□□□□ -0.97
AMBRA1-210ENST00000531542 C5orf17Q8NAS9 161 aa9□□□□□ -0.97
AMBRA1-210ENST00000531542 ASB13Q8WXK3 278 aa9□□□□□ -0.97
AMBRA1-210ENST00000531542 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 K7EQM0 130 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 TAAR5O14804 337 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 MBP02144 154 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 TCRAP04437 139 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 CRYGDP07320 174 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 PFN1P07737 140 aaKnown RBP8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 ARL14EPLP0DKL9 152 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 XGP55808 180 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 LINC01556Q5JQF7 62 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 AQP10Q96PS8 301 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 NDFIP1Q9BT67 221 aa8.99□□□□□ -0.97
AMBRA1-210ENST00000531542 IGHV3-38A0A0C4DH36 116 aa8.98□□□□□ -0.97
AMBRA1-210ENST00000531542 EPM2AB3EWF7 344 aa8.98□□□□□ -0.97
AMBRA1-210ENST00000531542 F6UZH7 168 aa8.98□□□□□ -0.97
AMBRA1-210ENST00000531542 EIF3GO75821 320 aaKnown RBP eCLIP8.98□□□□□ -0.97
AMBRA1-210ENST00000531542 CDC34P49427 236 aaPredicted RBP8.98□□□□□ -0.97
AMBRA1-210ENST00000531542 ZNF876PQ49A33 203 aa8.98□□□□□ -0.97
AMBRA1-210ENST00000531542 RAB24Q969Q5 203 aa8.98□□□□□ -0.97
AMBRA1-210ENST00000531542 RPH3ALQ9UNE2 315 aa8.98□□□□□ -0.97
AMBRA1-210ENST00000531542 IBA57-AS1B1ANH7 110 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 RS1O15537 224 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 IGLV2-11P01706 119 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 GCHFRP30047 84 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 GNG5P63218 68 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 PIK3CD-AS1Q5SR53 167 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 CFAP126Q5VTH2 177 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 SLC25A29Q8N8R3 303 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 C9orf85Q96MD7 179 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 TMEM167BQ9NRX6 74 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 C11orf21Q9P2W6 132 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 EPDR1Q9UM22 224 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 TNFSF18Q9UNG2 199 aa8.97□□□□□ -0.97
AMBRA1-210ENST00000531542 TRAV8-6A0A0B4J262 113 aa8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 LOC100131303A0A0U1RQF7 123 aa8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 HMGB3O15347 200 aaKnown RBP8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 ZNF80P51504 273 aaPredicted RBP8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 KRTAP10-1P60331 282 aa8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 RHOHQ15669 191 aa8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 SAPCD1Q5SSQ6 148 aa8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 TMEM75Q8N9X5 138 aa8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 NTN5Q8WTR8 489 aaPredicted RBP8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 PSG8Q9UQ74 426 aa8.96□□□□□ -0.98
AMBRA1-210ENST00000531542 A0A1W2PRE2 83 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 LRCOL1A6NCL2 159 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 CXorf1O96002 111 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 GCGP01275 180 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 MGST1P10620 155 aaKnown RBP8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 GCSHP23434 173 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 ATP6V0CP27449 155 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 PPT1P50897 306 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 SUMO1P63165 101 aaKnown RBP8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 FLI1Q01543 452 aaPredicted RBP8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 ZFP69Q49AA0 526 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 SMUG1Q53HV7 270 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 LELP1Q5T871 98 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 CYB561D1Q8N8Q1 229 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 NHLRC2Q8NBF2 726 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 HSD17B11Q8NBQ5 300 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 ALG5Q9Y673 324 aa8.95□□□□□ -0.98
AMBRA1-210ENST00000531542 GGTLC3B5MD39 225 aa8.94□□□□□ -0.98
AMBRA1-210ENST00000531542 RNASE3P12724 160 aaKnown RBP8.94□□□□□ -0.98
AMBRA1-210ENST00000531542 LAGE3Q14657 143 aa8.94□□□□□ -0.98
AMBRA1-210ENST00000531542 DPPA3Q6W0C5 159 aa8.94□□□□□ -0.98
AMBRA1-210ENST00000531542 ZFP2Q6ZN57 461 aa8.94□□□□□ -0.98
AMBRA1-210ENST00000531542 ACTR3CQ9C0K3 210 aaPredicted RBP8.94□□□□□ -0.98
AMBRA1-210ENST00000531542 SH3BGRL3Q9H299 93 aa8.94□□□□□ -0.98
AMBRA1-210ENST00000531542 PTTG1O95997 202 aa8.93□□□□□ -0.98
AMBRA1-210ENST00000531542 FUSP35637 526 aaKnown RBP eCLIP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms