RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 GCGP01275 180 aa13.04□□□□□ -0.32
PTPRU-211ENST00000531385 C18orf15Q96N68 181 aa13.04□□□□□ -0.32
PTPRU-211ENST00000531385 LINC00588Q9Y4M8 146 aa13.04□□□□□ -0.32
PTPRU-211ENST00000531385 hCG_2014768A0A024R1R8 64 aa13.03□□□□□ -0.32
PTPRU-211ENST00000531385 IGHV3-16A0A0C4DH30 117 aa13.03□□□□□ -0.32
PTPRU-211ENST00000531385 PFDN1O60925 122 aa13.03□□□□□ -0.32
PTPRU-211ENST00000531385 SFTA3P0C7M3 94 aa13.03□□□□□ -0.32
PTPRU-211ENST00000531385 SEC11BP0C7V7 166 aa13.03□□□□□ -0.32
PTPRU-211ENST00000531385 LGALS9BQ3B8N2 356 aa13.03□□□□□ -0.32
PTPRU-211ENST00000531385 TDRG1Q3Y452 100 aa13.03□□□□□ -0.32
PTPRU-211ENST00000531385 Q6ZNX1 250 aa13.03□□□□□ -0.32
PTPRU-211ENST00000531385 HECTD4Q9Y4D8 3996 aa13.03□□□□□ -0.32
PTPRU-211ENST00000531385 Q86TA4 180 aa13.02□□□□□ -0.33
PTPRU-211ENST00000531385 ARL2-SNX15V9GYD0 113 aa13.02□□□□□ -0.33
PTPRU-211ENST00000531385 SMUG1Q53HV7 270 aa13.01□□□□□ -0.33
PTPRU-211ENST00000531385 CST9LP1Q5W188 147 aa13.01□□□□□ -0.33
PTPRU-211ENST00000531385 ZNRF2Q8NHG8 242 aa13.01□□□□□ -0.33
PTPRU-211ENST00000531385 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
PTPRU-211ENST00000531385 SFT2D1Q8WV19 159 aa13.01□□□□□ -0.33
PTPRU-211ENST00000531385 SDF2L1Q9HCN8 221 aa13.01□□□□□ -0.33
PTPRU-211ENST00000531385 CCL18P55774 89 aa13□□□□□ -0.33
PTPRU-211ENST00000531385 ZFP69Q49AA0 526 aa13□□□□□ -0.33
PTPRU-211ENST00000531385 Q6ZR54 194 aa13□□□□□ -0.33
PTPRU-211ENST00000531385 TCTE3Q8IZS6 198 aa13□□□□□ -0.33
PTPRU-211ENST00000531385 ZNF479Q96JC4 524 aa13□□□□□ -0.33
PTPRU-211ENST00000531385 SPXQ9BT56 116 aa13□□□□□ -0.33
PTPRU-211ENST00000531385 A0A096LPF7 62 aa12.99□□□□□ -0.33
PTPRU-211ENST00000531385 RTL8CO15255 209 aa12.99□□□□□ -0.33
PTPRU-211ENST00000531385 PAGE4O60829 102 aa12.99□□□□□ -0.33
PTPRU-211ENST00000531385 PFN1P07737 140 aaKnown RBP12.99□□□□□ -0.33
PTPRU-211ENST00000531385 FHL2Q14192 279 aa12.99□□□□□ -0.33
PTPRU-211ENST00000531385 LGALSLQ3ZCW2 172 aaPredicted RBP12.99□□□□□ -0.33
PTPRU-211ENST00000531385 UMAD1C9J7I0 102 aa12.98□□□□□ -0.33
PTPRU-211ENST00000531385 PAX4O43316 350 aa12.98□□□□□ -0.33
PTPRU-211ENST00000531385 TPT1P13693 172 aaKnown RBP12.98□□□□□ -0.33
PTPRU-211ENST00000531385 PPT1P50897 306 aa12.98□□□□□ -0.33
PTPRU-211ENST00000531385 ESRGQ1W209 222 aa12.98□□□□□ -0.33
PTPRU-211ENST00000531385 MBD3L1Q8WWY6 194 aa12.98□□□□□ -0.33
PTPRU-211ENST00000531385 RASL10AQ92737 203 aa12.98□□□□□ -0.33
PTPRU-211ENST00000531385 HIST1H2BAQ96A08 127 aa12.98□□□□□ -0.33
PTPRU-211ENST00000531385 KCNS1Q96KK3 526 aa12.98□□□□□ -0.33
PTPRU-211ENST00000531385 TRGV4A0A0C4DH28 118 aa12.97□□□□□ -0.33
PTPRU-211ENST00000531385 H3BNG1 76 aa12.97□□□□□ -0.33
PTPRU-211ENST00000531385 M0R2P5 195 aa12.97□□□□□ -0.33
PTPRU-211ENST00000531385 EIF5AP63241 154 aaKnown RBP12.97□□□□□ -0.33
PTPRU-211ENST00000531385 SAPCD1Q5SSQ6 148 aa12.97□□□□□ -0.33
PTPRU-211ENST00000531385 NKX6-2Q9C056 277 aaPredicted RBP12.97□□□□□ -0.33
PTPRU-211ENST00000531385 FBLL1A6NHQ2 334 aaKnown RBP12.96□□□□□ -0.33
PTPRU-211ENST00000531385 CRYBA4P53673 196 aa12.96□□□□□ -0.33
PTPRU-211ENST00000531385 FAM3BP58499 235 aaPredicted RBP12.96□□□□□ -0.33
PTPRU-211ENST00000531385 ZC2HC1AQ96GY0 325 aa12.96□□□□□ -0.33
PTPRU-211ENST00000531385 PRO0255Q9UI72 69 aa12.96□□□□□ -0.33
PTPRU-211ENST00000531385 SCO2A0A1W2PP80 73 aa12.95□□□□□ -0.34
PTPRU-211ENST00000531385 C9JCJ5 164 aa12.95□□□□□ -0.34
PTPRU-211ENST00000531385 HHLA3Q9XRX5 114 aa12.95□□□□□ -0.34
PTPRU-211ENST00000531385 TRAV4A0A0B4J268 109 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 IGKV3D-20A0A0C4DH25 116 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 NBDYA0A0U1RRE5 68 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 C1QBP02746 253 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 H2AFB1P0C5Y9 115 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 AKR1C3P42330 323 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 CRIP1P50238 77 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 UBE2G1P62253 170 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 CCL20P78556 96 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 DPPA3Q6W0C5 159 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 C9orf85Q96MD7 179 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 ICOSQ9Y6W8 199 aa12.94□□□□□ -0.34
PTPRU-211ENST00000531385 M0R036 132 aa12.93□□□□□ -0.34
PTPRU-211ENST00000531385 RNASE3P12724 160 aaKnown RBP12.93□□□□□ -0.34
PTPRU-211ENST00000531385 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
PTPRU-211ENST00000531385 NHLRC2Q8NBF2 726 aa12.93□□□□□ -0.34
PTPRU-211ENST00000531385 OR4C5Q8NGB2 326 aa12.93□□□□□ -0.34
PTPRU-211ENST00000531385 FMC1Q96HJ9 113 aa12.93□□□□□ -0.34
PTPRU-211ENST00000531385 PKHD1P08F94 4074 aa12.93□□□□□ -0.34
PTPRU-211ENST00000531385 SH2D1AO60880 128 aa12.92□□□□□ -0.34
PTPRU-211ENST00000531385 ZNF876PQ49A33 203 aa12.92□□□□□ -0.34
PTPRU-211ENST00000531385 KRTAP1-5Q9BYS1 174 aa12.92□□□□□ -0.34
PTPRU-211ENST00000531385 Q9H8V8 135 aa12.92□□□□□ -0.34
PTPRU-211ENST00000531385 MRPS16Q9Y3D3 137 aaKnown RBP12.92□□□□□ -0.34
PTPRU-211ENST00000531385 DYNC1H1Q14204 4646 aaKnown RBP12.92□□□□□ -0.34
PTPRU-211ENST00000531385 PKD1P98161 4303 aa12.92□□□□□ -0.34
PTPRU-211ENST00000531385 LOC100131303A0A0U1RQF7 123 aa12.91□□□□□ -0.34
PTPRU-211ENST00000531385 PGPEP1LA6NFU8 196 aa12.91□□□□□ -0.34
PTPRU-211ENST00000531385 PRSS29PA6NIE9 313 aa12.91□□□□□ -0.34
PTPRU-211ENST00000531385 FABP5P3A8MUU1 101 aa12.91□□□□□ -0.34
PTPRU-211ENST00000531385 ZNF506Q5JVG8 444 aa12.91□□□□□ -0.34
PTPRU-211ENST00000531385 C1orf134Q5TEV5 83 aa12.91□□□□□ -0.34
PTPRU-211ENST00000531385 LINC00336Q6ZUF6 198 aa12.91□□□□□ -0.34
PTPRU-211ENST00000531385 IGHV3-73A0A0B4J1V6 119 aa12.9□□□□□ -0.34
PTPRU-211ENST00000531385 LTAP01374 205 aa12.9□□□□□ -0.34
PTPRU-211ENST00000531385 ORM1P02763 201 aa12.9□□□□□ -0.34
PTPRU-211ENST00000531385 GYPEP15421 78 aa12.9□□□□□ -0.34
PTPRU-211ENST00000531385 SLAQ13239 276 aa12.9□□□□□ -0.34
PTPRU-211ENST00000531385 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
PTPRU-211ENST00000531385 GNG13Q9P2W3 67 aa12.9□□□□□ -0.34
PTPRU-211ENST00000531385 ZFP30Q9Y2G7 519 aa12.9□□□□□ -0.34
PTPRU-211ENST00000531385 DNAH11Q96DT5 4516 aa12.89□□□□□ -0.35
PTPRU-211ENST00000531385 TMSB15BA0A087X1C1 80 aa12.89□□□□□ -0.35
PTPRU-211ENST00000531385 A0A1B0GVG6 124 aa12.89□□□□□ -0.35
PTPRU-211ENST00000531385 A0A1B0GVY2 172 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms