RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 STX12Q86Y82 276 aa13.9□□□□□ -0.18
CHKA-206ENST00000531341 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.89□□□□□ -0.19
CHKA-206ENST00000531341 TRAV6A0A075B6T7 132 aa13.89□□□□□ -0.19
CHKA-206ENST00000531341 CCDC160A6NGH7 325 aa13.89□□□□□ -0.19
CHKA-206ENST00000531341 DIRC3C9JPN6 131 aa13.89□□□□□ -0.19
CHKA-206ENST00000531341 PLA2G10O15496 165 aa13.89□□□□□ -0.19
CHKA-206ENST00000531341 TYMSP04818 313 aa13.88□□□□□ -0.19
CHKA-206ENST00000531341 IL7P13232 177 aa13.88□□□□□ -0.19
CHKA-206ENST00000531341 CSN1S1P47710 185 aa13.88□□□□□ -0.19
CHKA-206ENST00000531341 DPPA3Q6W0C5 159 aa13.88□□□□□ -0.19
CHKA-206ENST00000531341 SCXQ7RTU7 201 aa13.88□□□□□ -0.19
CHKA-206ENST00000531341 SYT8Q8NBV8 401 aa13.88□□□□□ -0.19
CHKA-206ENST00000531341 PFN1P07737 140 aaKnown RBP13.87□□□□□ -0.19
CHKA-206ENST00000531341 LELP1Q5T871 98 aa13.87□□□□□ -0.19
CHKA-206ENST00000531341 IGHV3-73A0A0B4J1V6 119 aa13.86□□□□□ -0.19
CHKA-206ENST00000531341 EIF3GO75821 320 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHKA-206ENST00000531341 CNPY1Q3B7I2 92 aa13.86□□□□□ -0.19
CHKA-206ENST00000531341 OR5C1Q8NGR4 320 aa13.86□□□□□ -0.19
CHKA-206ENST00000531341 TVP23CQ96ET8 276 aa13.86□□□□□ -0.19
CHKA-206ENST00000531341 LENEPQ9Y5L5 61 aa13.86□□□□□ -0.19
CHKA-206ENST00000531341 FBLL1A6NHQ2 334 aaKnown RBP13.85□□□□□ -0.19
CHKA-206ENST00000531341 OR7C2O60412 319 aa13.85□□□□□ -0.19
CHKA-206ENST00000531341 TCRBP04435 133 aa13.85□□□□□ -0.19
CHKA-206ENST00000531341 HYLS1Q96M11 299 aa13.85□□□□□ -0.19
CHKA-206ENST00000531341 RBM38Q9H0Z9 239 aaKnown RBP13.85□□□□□ -0.19
CHKA-206ENST00000531341 F6UZH7 168 aa13.84□□□□□ -0.19
CHKA-206ENST00000531341 LAGE3Q14657 143 aa13.84□□□□□ -0.19
CHKA-206ENST00000531341 CFAP126Q5VTH2 177 aa13.84□□□□□ -0.19
CHKA-206ENST00000531341 TM2D2Q9BX73 214 aa13.84□□□□□ -0.19
CHKA-206ENST00000531341 BAALCQ8WXS3 180 aa13.83□□□□□ -0.2
CHKA-206ENST00000531341 WDR61Q9GZS3 305 aaKnown RBP13.83□□□□□ -0.2
CHKA-206ENST00000531341 RPH3ALQ9UNE2 315 aa13.83□□□□□ -0.2
CHKA-206ENST00000531341 PLA2G2DQ9UNK4 145 aa13.83□□□□□ -0.2
CHKA-206ENST00000531341 TRBV6-4A0A1B0GX49 114 aa13.82□□□□□ -0.2
CHKA-206ENST00000531341 RS1O15537 224 aa13.82□□□□□ -0.2
CHKA-206ENST00000531341 UBE2L3P68036 154 aaKnown RBP13.82□□□□□ -0.2
CHKA-206ENST00000531341 RHOHQ15669 191 aa13.82□□□□□ -0.2
CHKA-206ENST00000531341 ZNF876PQ49A33 203 aa13.82□□□□□ -0.2
CHKA-206ENST00000531341 DAZ4Q86SG3 579 aaKnown RBP13.82□□□□□ -0.2
CHKA-206ENST00000531341 TMED6Q8WW62 240 aa13.82□□□□□ -0.2
CHKA-206ENST00000531341 PRADC1Q9BSG0 188 aa13.82□□□□□ -0.2
CHKA-206ENST00000531341 GTSF1LQ9H1H1 148 aa13.82□□□□□ -0.2
CHKA-206ENST00000531341 DAZ3Q9NR90 486 aaKnown RBP13.82□□□□□ -0.2
CHKA-206ENST00000531341 TRAV8-1A0A0A6YYK1 113 aa13.81□□□□□ -0.2
CHKA-206ENST00000531341 TRAV21A0A0B4J279 112 aa13.81□□□□□ -0.2
CHKA-206ENST00000531341 LYRM1O43325 122 aa13.81□□□□□ -0.2
CHKA-206ENST00000531341 OXTP01178 125 aa13.81□□□□□ -0.2
CHKA-206ENST00000531341 ATP6V0E2Q8NHE4 81 aa13.81□□□□□ -0.2
CHKA-206ENST00000531341 DNAJC30Q96LL9 226 aa13.81□□□□□ -0.2
CHKA-206ENST00000531341 SDF2L1Q9HCN8 221 aa13.81□□□□□ -0.2
CHKA-206ENST00000531341 NUDT15Q9NV35 164 aa13.81□□□□□ -0.2
CHKA-206ENST00000531341 PGPA6NDG6 321 aa13.8□□□□□ -0.2
CHKA-206ENST00000531341 CIRBP-AS1Q8TBR5 109 aa13.8□□□□□ -0.2
CHKA-206ENST00000531341 CHAC1Q9BUX1 264 aa13.8□□□□□ -0.2
CHKA-206ENST00000531341 OR5AC2Q9NZP5 309 aa13.8□□□□□ -0.2
CHKA-206ENST00000531341 C11orf21Q9P2W6 132 aa13.8□□□□□ -0.2
CHKA-206ENST00000531341 GOLT1AQ6ZVE7 132 aa13.79□□□□□ -0.2
CHKA-206ENST00000531341 ASB13Q8WXK3 278 aa13.79□□□□□ -0.2
CHKA-206ENST00000531341 BOLA1Q9Y3E2 137 aa13.79□□□□□ -0.2
CHKA-206ENST00000531341 PGPEP1LA6NFU8 196 aa13.78□□□□□ -0.2
CHKA-206ENST00000531341 TREM1Q9NP99 234 aa13.78□□□□□ -0.2
CHKA-206ENST00000531341 OTORQ9NRC9 128 aa13.78□□□□□ -0.2
CHKA-206ENST00000531341 Q9UF83 564 aa13.78□□□□□ -0.2
CHKA-206ENST00000531341 TRAV8-3A0A0A6YYJ7 113 aa13.77□□□□□ -0.21
CHKA-206ENST00000531341 RBFOX3A6NFN3 312 aa13.77□□□□□ -0.21
CHKA-206ENST00000531341 H0YIZ8 118 aa13.77□□□□□ -0.21
CHKA-206ENST00000531341 SIX6O95475 246 aa13.77□□□□□ -0.21
CHKA-206ENST00000531341 ZNF80P51504 273 aaPredicted RBP13.77□□□□□ -0.21
CHKA-206ENST00000531341 KCNS1Q96KK3 526 aa13.77□□□□□ -0.21
CHKA-206ENST00000531341 SGK494Q96LW2 274 aa13.77□□□□□ -0.21
CHKA-206ENST00000531341 H2AFB2P0C5Z0 115 aa13.76□□□□□ -0.21
CHKA-206ENST00000531341 GNG5P63218 68 aa13.76□□□□□ -0.21
CHKA-206ENST00000531341 FFAR4Q5NUL3 377 aa13.76□□□□□ -0.21
CHKA-206ENST00000531341 TMEM75Q8N9X5 138 aa13.76□□□□□ -0.21
CHKA-206ENST00000531341 NMES1Q9C002 83 aa13.76□□□□□ -0.21
CHKA-206ENST00000531341 MBD2Q9UBB5 411 aa13.76□□□□□ -0.21
CHKA-206ENST00000531341 RNF213Q63HN8 5207 aa13.76□□□□□ -0.21
CHKA-206ENST00000531341 ZNF506Q5JVG8 444 aa13.75□□□□□ -0.21
CHKA-206ENST00000531341 CMTM2Q8TAZ6 248 aa13.75□□□□□ -0.21
CHKA-206ENST00000531341 RNF222A6NCQ9 220 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 GAGE12JA6NER3 117 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 C17orf112F2Z3M2 114 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 CIDEAO60543 219 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 GAGE1Q13065 139 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 GAGE4Q13068 117 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 GAGE5Q13069 117 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 LRRC37A5PQ49AS3 106 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 GAGE13Q4V321 117 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 KHDC3LQ587J8 217 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 C9orf85Q96MD7 179 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 ATP5SQ99766 215 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 KCNIP2Q9NS61 270 aa13.74□□□□□ -0.21
CHKA-206ENST00000531341 LINC00694P0DN24 101 aa13.73□□□□□ -0.21
CHKA-206ENST00000531341 MGST1P10620 155 aaKnown RBP13.73□□□□□ -0.21
CHKA-206ENST00000531341 HNRNPA3P51991 378 aaKnown RBP13.73□□□□□ -0.21
CHKA-206ENST00000531341 RNASE3P12724 160 aaKnown RBP13.72□□□□□ -0.21
CHKA-206ENST00000531341 LRP2P98164 4655 aa13.71□□□□□ -0.21
CHKA-206ENST00000531341 GGTLC3B5MD39 225 aa13.71□□□□□ -0.21
CHKA-206ENST00000531341 IGLV2-8P01709 118 aa13.71□□□□□ -0.21
CHKA-206ENST00000531341 Q8N976 141 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms