RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 K7EQM0 130 aa15.29■□□□□ 0.04
TRAPPC4-210ENST00000531290 NXPH4O95158 308 aa15.29■□□□□ 0.04
TRAPPC4-210ENST00000531290 TMEM183BQ1AE95 376 aa15.29■□□□□ 0.04
TRAPPC4-210ENST00000531290 Q6AWC8 147 aa15.29■□□□□ 0.04
TRAPPC4-210ENST00000531290 TMEM183AQ8IXX5 376 aa15.29■□□□□ 0.04
TRAPPC4-210ENST00000531290 SPXQ9BT56 116 aa15.29■□□□□ 0.04
TRAPPC4-210ENST00000531290 TRGV11A0A075B6L2 103 aa15.28■□□□□ 0.04
TRAPPC4-210ENST00000531290 CTXND1A0A1B0GTU2 59 aa15.28■□□□□ 0.04
TRAPPC4-210ENST00000531290 LINC00315P59091 139 aa15.28■□□□□ 0.04
TRAPPC4-210ENST00000531290 GOLT1AQ6ZVE7 132 aa15.28■□□□□ 0.04
TRAPPC4-210ENST00000531290 TMED6Q8WW62 240 aa15.28■□□□□ 0.04
TRAPPC4-210ENST00000531290 CYTL1Q9NRR1 136 aa15.28■□□□□ 0.04
TRAPPC4-210ENST00000531290 SERTM2A0A1B0GWG4 89 aa15.27■□□□□ 0.04
TRAPPC4-210ENST00000531290 EIF5AP63241 154 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-210ENST00000531290 LYPD5Q6UWN5 251 aa15.27■□□□□ 0.04
TRAPPC4-210ENST00000531290 NEGR1Q7Z3B1 354 aa15.27■□□□□ 0.04
TRAPPC4-210ENST00000531290 KRTAP4-5Q9BYR2 181 aa15.27■□□□□ 0.04
TRAPPC4-210ENST00000531290 NAGKQ9UJ70 344 aa15.27■□□□□ 0.04
TRAPPC4-210ENST00000531290 PFDN1O60925 122 aa15.26■□□□□ 0.03
TRAPPC4-210ENST00000531290 MAPKAPK5-AS1Q8N8E1 139 aa15.26■□□□□ 0.03
TRAPPC4-210ENST00000531290 C5orf17Q8NAS9 161 aa15.26■□□□□ 0.03
TRAPPC4-210ENST00000531290 RASL10AQ92737 203 aa15.26■□□□□ 0.03
TRAPPC4-210ENST00000531290 SFTA3P0C7M3 94 aa15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 SUMO1P63165 101 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 OR11H4Q8NGC9 324 aa15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 STOML3Q8TAV4 291 aa15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 SUN5Q8TC36 379 aa15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 PCNPQ8WW12 178 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 ZNF479Q96JC4 524 aa15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 NDFIP1Q9BT67 221 aa15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 ZNF471Q9BX82 626 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 DNAH5Q8TE73 4624 aa15.25■□□□□ 0.03
TRAPPC4-210ENST00000531290 TRAV9-2A0A087WT02 112 aa15.24■□□□□ 0.03
TRAPPC4-210ENST00000531290 SRIP30626 198 aa15.24■□□□□ 0.03
TRAPPC4-210ENST00000531290 KRTAP10-2P60368 255 aa15.24■□□□□ 0.03
TRAPPC4-210ENST00000531290 TRAV21A0A0B4J279 112 aa15.23■□□□□ 0.03
TRAPPC4-210ENST00000531290 BCL2L11O43521 198 aa15.23■□□□□ 0.03
TRAPPC4-210ENST00000531290 GNG5P63218 68 aa15.23■□□□□ 0.03
TRAPPC4-210ENST00000531290 TDRG1Q3Y452 100 aa15.23■□□□□ 0.03
TRAPPC4-210ENST00000531290 TREM1Q9NP99 234 aa15.23■□□□□ 0.03
TRAPPC4-210ENST00000531290 MUC4Q99102 2169 aa15.23■□□□□ 0.03
TRAPPC4-210ENST00000531290 APOBP04114 4563 aaKnown RBP15.22■□□□□ 0.03
TRAPPC4-210ENST00000531290 A0A1W2PRE2 83 aa15.22■□□□□ 0.03
TRAPPC4-210ENST00000531290 K7EQD1 137 aa15.22■□□□□ 0.03
TRAPPC4-210ENST00000531290 GNRH2O43555 120 aa15.22■□□□□ 0.03
TRAPPC4-210ENST00000531290 ORM1P02763 201 aa15.22■□□□□ 0.03
TRAPPC4-210ENST00000531290 TCRAP04437 139 aa15.22■□□□□ 0.03
TRAPPC4-210ENST00000531290 SEC11BP0C7V7 166 aa15.22■□□□□ 0.03
TRAPPC4-210ENST00000531290 ZNF726P1Q15940 193 aa15.22■□□□□ 0.03
TRAPPC4-210ENST00000531290 MAP1LC3B2A6NCE7 125 aa15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 UMAD1C9J7I0 102 aa15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 EREGO14944 169 aa15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 IFNA7P01567 189 aa15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 GYPEP15421 78 aa15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 Q6ZRN7 208 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 NFE4Q86UQ8 179 aa15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 OR4C5Q8NGB2 326 aa15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 NKX6-2Q9C056 277 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 MAP1LC3BQ9GZQ8 125 aa15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 EPDR1Q9UM22 224 aa15.21■□□□□ 0.03
TRAPPC4-210ENST00000531290 TRAV8-1A0A0A6YYK1 113 aa15.2■□□□□ 0.02
TRAPPC4-210ENST00000531290 TRAV4A0A0B4J268 109 aa15.2■□□□□ 0.02
TRAPPC4-210ENST00000531290 FBLL1A6NHQ2 334 aaKnown RBP15.2■□□□□ 0.02
TRAPPC4-210ENST00000531290 M0R2P5 195 aa15.2■□□□□ 0.02
TRAPPC4-210ENST00000531290 FGF8P55075 233 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-210ENST00000531290 Q6ZNX1 250 aa15.2■□□□□ 0.02
TRAPPC4-210ENST00000531290 TMUB2Q71RG4 321 aa15.2■□□□□ 0.02
TRAPPC4-210ENST00000531290 LY96Q9Y6Y9 160 aa15.2■□□□□ 0.02
TRAPPC4-210ENST00000531290 IGHV3-16A0A0C4DH30 117 aa15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 C9JCJ5 164 aa15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 F6UZH7 168 aa15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 TPT1P13693 172 aaKnown RBP15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 UBE2G2P60604 165 aa15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 CYB561D1Q8N8Q1 229 aa15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 KCNS1Q96KK3 526 aa15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 TXNDC17Q9BRA2 123 aa15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 SDF2L1Q9HCN8 221 aa15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 PGPEP1Q9NXJ5 209 aa15.19■□□□□ 0.02
TRAPPC4-210ENST00000531290 GGTLC3B5MD39 225 aa15.18■□□□□ 0.02
TRAPPC4-210ENST00000531290 PPT1P50897 306 aa15.18■□□□□ 0.02
TRAPPC4-210ENST00000531290 ERVFC1-1P60608 527 aa15.18■□□□□ 0.02
TRAPPC4-210ENST00000531290 TCTE3Q8IZS6 198 aa15.18■□□□□ 0.02
TRAPPC4-210ENST00000531290 TVP23CQ96ET8 276 aa15.18■□□□□ 0.02
TRAPPC4-210ENST00000531290 SGK494Q96LW2 274 aa15.18■□□□□ 0.02
TRAPPC4-210ENST00000531290 TNFRSF18Q9Y5U5 241 aa15.18■□□□□ 0.02
TRAPPC4-210ENST00000531290 EVI2AP22794 236 aa15.17■□□□□ 0.02
TRAPPC4-210ENST00000531290 FLI1Q01543 452 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC4-210ENST00000531290 ZFP69Q49AA0 526 aa15.17■□□□□ 0.02
TRAPPC4-210ENST00000531290 FAM213BQ8TBF2 198 aa15.17■□□□□ 0.02
TRAPPC4-210ENST00000531290 PSG8Q9UQ74 426 aa15.17■□□□□ 0.02
TRAPPC4-210ENST00000531290 K7EP13 123 aa15.16■□□□□ 0.02
TRAPPC4-210ENST00000531290 TYMSP04818 313 aa15.16■□□□□ 0.02
TRAPPC4-210ENST00000531290 SAPCD1Q5SSQ6 148 aa15.16■□□□□ 0.02
TRAPPC4-210ENST00000531290 EIF5AL1Q6IS14 154 aaKnown RBP15.16■□□□□ 0.02
TRAPPC4-210ENST00000531290 DPPA3Q6W0C5 159 aa15.16■□□□□ 0.02
TRAPPC4-210ENST00000531290 PRNTQ86SH4 94 aa15.16■□□□□ 0.02
TRAPPC4-210ENST00000531290 Q8N1X5 172 aa15.16■□□□□ 0.02
TRAPPC4-210ENST00000531290 SFT2D1Q8WV19 159 aa15.16■□□□□ 0.02
TRAPPC4-210ENST00000531290 SH2D6Q7Z4S9 175 aa15.15■□□□□ 0.02
TRAPPC4-210ENST00000531290 WFDC10BQ8IUB3 73 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms