RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 NAGKQ9UJ70 344 aa9.96□□□□□ -0.82
CAPN1-219ENST00000530495 TRAV8-6A0A0B4J262 113 aa9.95□□□□□ -0.82
CAPN1-219ENST00000530495 UBE2L3P68036 154 aaKnown RBP9.95□□□□□ -0.82
CAPN1-219ENST00000530495 OR5AC2Q9NZP5 309 aa9.95□□□□□ -0.82
CAPN1-219ENST00000530495 TRAV21A0A0B4J279 112 aa9.94□□□□□ -0.82
CAPN1-219ENST00000530495 FAM240BA0A1B0GVZ2 78 aa9.94□□□□□ -0.82
CAPN1-219ENST00000530495 TYMSP04818 313 aa9.94□□□□□ -0.82
CAPN1-219ENST00000530495 SLC25A29Q8N8R3 303 aa9.94□□□□□ -0.82
CAPN1-219ENST00000530495 HYLS1Q96M11 299 aa9.94□□□□□ -0.82
CAPN1-219ENST00000530495 Q9HAA7 133 aa9.94□□□□□ -0.82
CAPN1-219ENST00000530495 OTORQ9NRC9 128 aa9.94□□□□□ -0.82
CAPN1-219ENST00000530495 PGPA6NDG6 321 aa9.93□□□□□ -0.82
CAPN1-219ENST00000530495 FBLL1A6NHQ2 334 aaKnown RBP9.93□□□□□ -0.82
CAPN1-219ENST00000530495 H0YIZ8 118 aa9.93□□□□□ -0.82
CAPN1-219ENST00000530495 CIDEAO60543 219 aa9.93□□□□□ -0.82
CAPN1-219ENST00000530495 KHDC3LQ587J8 217 aa9.93□□□□□ -0.82
CAPN1-219ENST00000530495 OR10J3Q5JRS4 329 aa9.93□□□□□ -0.82
CAPN1-219ENST00000530495 ARL6IP6Q8N6S5 226 aa9.93□□□□□ -0.82
CAPN1-219ENST00000530495 TVP23CQ96ET8 276 aa9.93□□□□□ -0.82
CAPN1-219ENST00000530495 KCNS1Q96KK3 526 aa9.93□□□□□ -0.82
CAPN1-219ENST00000530495 NMES1Q9C002 83 aa9.93□□□□□ -0.82
CAPN1-219ENST00000530495 TRBV6-4A0A1B0GX49 114 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 SIX6O95475 246 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 IGHV3-30P01768 117 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 IGHV3-33P01772 117 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 PLA2G1BP04054 148 aaKnown RBP9.92□□□□□ -0.82
CAPN1-219ENST00000530495 IGHV3-30-3P0DP02 117 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 IGHV3-30-5P0DP03 117 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 TAS2R45P59539 299 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 FFAR4Q5NUL3 377 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 LELP1Q5T871 98 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 Q6ZSA8 131 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 CMTM2Q8TAZ6 248 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 PRADC1Q9BSG0 188 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 CCDC32Q9BV29 185 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 SDF2L1Q9HCN8 221 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 MBD2Q9UBB5 411 aa9.92□□□□□ -0.82
CAPN1-219ENST00000530495 KRTAP29-1A8MX34 341 aaPredicted RBP9.91□□□□□ -0.82
CAPN1-219ENST00000530495 RS1O15537 224 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 LAGE3Q14657 143 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 ZNF876PQ49A33 203 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 LRRC37A5PQ49AS3 106 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 FAM74A1Q5RGS3 127 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 CFAP126Q5VTH2 177 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 MZT2BQ6NZ67 158 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 ATP5SQ99766 215 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 TM2D2Q9BX73 214 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 TREM1Q9NP99 234 aa9.91□□□□□ -0.82
CAPN1-219ENST00000530495 F6UZH7 168 aa9.9□□□□□ -0.82
CAPN1-219ENST00000530495 CYCSP99999 105 aaKnown RBP9.9□□□□□ -0.82
CAPN1-219ENST00000530495 RHOHQ15669 191 aa9.9□□□□□ -0.82
CAPN1-219ENST00000530495 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
CAPN1-219ENST00000530495 S100ZQ8WXG8 99 aa9.9□□□□□ -0.82
CAPN1-219ENST00000530495 ASB13Q8WXK3 278 aa9.9□□□□□ -0.82
CAPN1-219ENST00000530495 GTSF1LQ9H1H1 148 aa9.9□□□□□ -0.82
CAPN1-219ENST00000530495 RPH3ALQ9UNE2 315 aa9.9□□□□□ -0.82
CAPN1-219ENST00000530495 DPPA3Q6W0C5 159 aa9.89□□□□□ -0.83
CAPN1-219ENST00000530495 ATP6V0E2Q8NHE4 81 aa9.89□□□□□ -0.83
CAPN1-219ENST00000530495 SCGB1C1Q8TD33 95 aa9.89□□□□□ -0.83
CAPN1-219ENST00000530495 TRAV8-1A0A0A6YYK1 113 aa9.88□□□□□ -0.83
CAPN1-219ENST00000530495 EIF3GO75821 320 aaKnown RBP eCLIP9.88□□□□□ -0.83
CAPN1-219ENST00000530495 WFDC2Q14508 124 aa9.88□□□□□ -0.83
CAPN1-219ENST00000530495 LINC00528Q8N1L1 170 aa9.88□□□□□ -0.83
CAPN1-219ENST00000530495 DEFB104AQ8WTQ1 72 aa9.88□□□□□ -0.83
CAPN1-219ENST00000530495 PTH2Q96A98 100 aa9.88□□□□□ -0.83
CAPN1-219ENST00000530495 IGHV3-73A0A0B4J1V6 119 aa9.87□□□□□ -0.83
CAPN1-219ENST00000530495 MGST1P10620 155 aaKnown RBP9.87□□□□□ -0.83
CAPN1-219ENST00000530495 ASAH1Q13510 395 aa9.87□□□□□ -0.83
CAPN1-219ENST00000530495 PQLC2Q6ZP29 291 aa9.87□□□□□ -0.83
CAPN1-219ENST00000530495 C11orf21Q9P2W6 132 aa9.87□□□□□ -0.83
CAPN1-219ENST00000530495 HSPB11Q9Y547 144 aa9.87□□□□□ -0.83
CAPN1-219ENST00000530495 TRAV8-3A0A0A6YYJ7 113 aa9.86□□□□□ -0.83
CAPN1-219ENST00000530495 PGPEP1LA6NFU8 196 aa9.86□□□□□ -0.83
CAPN1-219ENST00000530495 TAAR5O14804 337 aa9.86□□□□□ -0.83
CAPN1-219ENST00000530495 ZNF80P51504 273 aaPredicted RBP9.86□□□□□ -0.83
CAPN1-219ENST00000530495 H2BFSP57053 126 aa9.86□□□□□ -0.83
CAPN1-219ENST00000530495 PPP1R1CQ8WVI7 109 aa9.86□□□□□ -0.83
CAPN1-219ENST00000530495 C9orf85Q96MD7 179 aa9.86□□□□□ -0.83
CAPN1-219ENST00000530495 SH3BGRL3Q9H299 93 aa9.86□□□□□ -0.83
CAPN1-219ENST00000530495 A0A1W2PPV4 95 aa9.85□□□□□ -0.83
CAPN1-219ENST00000530495 GNG5P63218 68 aa9.85□□□□□ -0.83
CAPN1-219ENST00000530495 ACOT6Q3I5F7 207 aaPredicted RBP9.85□□□□□ -0.83
CAPN1-219ENST00000530495 Q8N3U1 123 aa9.85□□□□□ -0.83
CAPN1-219ENST00000530495 SGK494Q96LW2 274 aa9.85□□□□□ -0.83
CAPN1-219ENST00000530495 NDFIP1Q9BT67 221 aa9.85□□□□□ -0.83
CAPN1-219ENST00000530495 SERTM2A0A1B0GWG4 89 aa9.84□□□□□ -0.83
CAPN1-219ENST00000530495 MPC2O95563 127 aa9.84□□□□□ -0.83
CAPN1-219ENST00000530495 RPL12P30050 165 aaKnown RBP9.84□□□□□ -0.83
CAPN1-219ENST00000530495 ZNF506Q5JVG8 444 aa9.84□□□□□ -0.83
CAPN1-219ENST00000530495 SMIM3Q9BZL3 60 aa9.84□□□□□ -0.83
CAPN1-219ENST00000530495 LECT2O14960 151 aa9.83□□□□□ -0.84
CAPN1-219ENST00000530495 RNASE3P12724 160 aaKnown RBP9.83□□□□□ -0.84
CAPN1-219ENST00000530495 TOR2AQ5JU69 321 aa9.83□□□□□ -0.84
CAPN1-219ENST00000530495 SERTAD4-AS1Q5TG53 156 aa9.83□□□□□ -0.84
CAPN1-219ENST00000530495 DAZ4Q86SG3 579 aaKnown RBP9.83□□□□□ -0.84
CAPN1-219ENST00000530495 ENKURQ8TC29 256 aa9.83□□□□□ -0.84
CAPN1-219ENST00000530495 WFDC1Q9HC57 220 aa9.83□□□□□ -0.84
CAPN1-219ENST00000530495 DAZ3Q9NR90 486 aaKnown RBP9.83□□□□□ -0.84
CAPN1-219ENST00000530495 COX11Q9Y6N1 276 aa9.83□□□□□ -0.84
CAPN1-219ENST00000530495 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms