RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 SGK494Q96LW2 274 aa8.86□□□□□ -0.99
CPSF1-204ENST00000529288 PGPEP1Q9NXJ5 209 aa8.86□□□□□ -0.99
CPSF1-204ENST00000529288 TRAV8-1A0A0A6YYK1 113 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 TRAV21A0A0B4J279 112 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 EVI2AP22794 236 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 RAB2AP61019 212 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 NHLRC2Q8NBF2 726 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 OR10G9Q8NGN4 311 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 OR10G7Q8NGN6 311 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 RASL10AQ92737 203 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 TREM1Q9NP99 234 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 LENEPQ9Y5L5 61 aa8.85□□□□□ -0.99
CPSF1-204ENST00000529288 TRAV4A0A0B4J268 109 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 C9JCJ5 164 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 M0R2P5 195 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 ORM1P02763 201 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 DNAH10OSP0CZ25 163 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 IQCF2Q8IXL9 164 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 OR2T35Q8NGX2 323 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 TXNDC17Q9BRA2 123 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 SDF2L1Q9HCN8 221 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 MSRB1Q9NZV6 116 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 TNFSF18Q9UNG2 199 aa8.84□□□□□ -0.99
CPSF1-204ENST00000529288 TYMSP04818 313 aa8.83□□□□□ -1
CPSF1-204ENST00000529288 PPT1P50897 306 aa8.83□□□□□ -1
CPSF1-204ENST00000529288 PQLC2Q6ZP29 291 aa8.83□□□□□ -1
CPSF1-204ENST00000529288 TMED6Q8WW62 240 aa8.83□□□□□ -1
CPSF1-204ENST00000529288 TVP23CQ96ET8 276 aa8.83□□□□□ -1
CPSF1-204ENST00000529288 A0A087WTM6 91 aa8.82□□□□□ -1
CPSF1-204ENST00000529288 CRYGDP07320 174 aa8.82□□□□□ -1
CPSF1-204ENST00000529288 HSD17B11Q8NBQ5 300 aa8.82□□□□□ -1
CPSF1-204ENST00000529288 NDFIP1Q9BT67 221 aa8.82□□□□□ -1
CPSF1-204ENST00000529288 FXYD6-FXYD2A0A087WZ82 144 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 IGHV3-73A0A0B4J1V6 119 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 EPM2AB3EWF7 344 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 SMLR1H3BR10 107 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 ARL14EPLP0DKL9 152 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 ATP6V0CP27449 155 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 CDC34P49427 236 aaPredicted RBP8.81□□□□□ -1
CPSF1-204ENST00000529288 TDRG1Q3Y452 100 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 OR2G3Q8NGZ4 309 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 KCNS1Q96KK3 526 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 SH3BGRL3Q9H299 93 aa8.81□□□□□ -1
CPSF1-204ENST00000529288 FBLL1A6NHQ2 334 aaKnown RBP8.8□□□□□ -1
CPSF1-204ENST00000529288 PSCAO43653 123 aa8.8□□□□□ -1
CPSF1-204ENST00000529288 RPL7L1Q6DKI1 246 aaKnown RBP8.8□□□□□ -1
CPSF1-204ENST00000529288 PSMG3Q9BT73 122 aaPredicted RBP8.8□□□□□ -1
CPSF1-204ENST00000529288 K7EQM0 130 aa8.79□□□□□ -1
CPSF1-204ENST00000529288 GATA1P15976 413 aaPredicted RBP8.79□□□□□ -1
CPSF1-204ENST00000529288 KRTAP10-1P60331 282 aa8.79□□□□□ -1
CPSF1-204ENST00000529288 ZNF876PQ49A33 203 aa8.79□□□□□ -1
CPSF1-204ENST00000529288 OR10J3Q5JRS4 329 aa8.79□□□□□ -1
CPSF1-204ENST00000529288 CDPF1Q6NVV7 123 aa8.79□□□□□ -1
CPSF1-204ENST00000529288 PRNTQ86SH4 94 aa8.79□□□□□ -1
CPSF1-204ENST00000529288 INO80EQ8NBZ0 244 aaPredicted RBP8.79□□□□□ -1
CPSF1-204ENST00000529288 OR11H4Q8NGC9 324 aa8.79□□□□□ -1
CPSF1-204ENST00000529288 CYTL1Q9NRR1 136 aa8.79□□□□□ -1
CPSF1-204ENST00000529288 PSG8Q9UQ74 426 aa8.79□□□□□ -1
CPSF1-204ENST00000529288 IGHV3-38A0A0C4DH36 116 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 GCGP01275 180 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 TCRAP04437 139 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 GCHFRP30047 84 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 ZNF80P51504 273 aaPredicted RBP8.78□□□□□ -1
CPSF1-204ENST00000529288 SUMO1P63165 101 aaKnown RBP8.78□□□□□ -1
CPSF1-204ENST00000529288 SH2D6Q7Z4S9 175 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 C10orf126Q8N4M7 172 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 ARL6IP6Q8N6S5 226 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 RAB24Q969Q5 203 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 PRADC1Q9BSG0 188 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 Q9HAA7 133 aa8.78□□□□□ -1
CPSF1-204ENST00000529288 TRAV8-6A0A0B4J262 113 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 K7EP13 123 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 TAAR5O14804 337 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 ARPC5O15511 151 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 IGHV3-30P01768 117 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 IGHV3-33P01772 117 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 PFN1P07737 140 aaKnown RBP8.77□□□□□ -1.01
CPSF1-204ENST00000529288 STAG3L2P0CL84 134 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 STAG3L3P0CL85 134 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 IGHV3-30-3P0DP02 117 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 IGHV3-30-5P0DP03 117 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 XGP55808 180 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 ZFP69Q49AA0 526 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 SLC25A29Q8N8R3 303 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 C5orf17Q8NAS9 161 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 C11orf21Q9P2W6 132 aa8.77□□□□□ -1.01
CPSF1-204ENST00000529288 SERTM2A0A1B0GWG4 89 aa8.76□□□□□ -1.01
CPSF1-204ENST00000529288 RS1O15537 224 aa8.76□□□□□ -1.01
CPSF1-204ENST00000529288 SMR3BP02814 79 aaPredicted RBP8.76□□□□□ -1.01
CPSF1-204ENST00000529288 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
CPSF1-204ENST00000529288 GCSHP23434 173 aa8.76□□□□□ -1.01
CPSF1-204ENST00000529288 SERF2P84101 59 aa8.76□□□□□ -1.01
CPSF1-204ENST00000529288 FLI1Q01543 452 aaPredicted RBP8.76□□□□□ -1.01
CPSF1-204ENST00000529288 RHOHQ15669 191 aa8.76□□□□□ -1.01
CPSF1-204ENST00000529288 SMUG1Q53HV7 270 aa8.76□□□□□ -1.01
CPSF1-204ENST00000529288 CFAP126Q5VTH2 177 aa8.76□□□□□ -1.01
CPSF1-204ENST00000529288 DPPA3Q6W0C5 159 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms