RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 HHLA3Q9XRX5 114 aa10.76□□□□□ -0.69
CAPN1-213ENST00000527897 ICOSQ9Y6W8 199 aa10.76□□□□□ -0.69
CAPN1-213ENST00000527897 GCGP01275 180 aa10.75□□□□□ -0.69
CAPN1-213ENST00000527897 TYMSP04818 313 aa10.75□□□□□ -0.69
CAPN1-213ENST00000527897 TDRG1Q3Y452 100 aa10.75□□□□□ -0.69
CAPN1-213ENST00000527897 ZNF479Q96JC4 524 aa10.75□□□□□ -0.69
CAPN1-213ENST00000527897 CYTL1Q9NRR1 136 aa10.75□□□□□ -0.69
CAPN1-213ENST00000527897 TRAV34A0A0B4J273 112 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 IGHV3-16A0A0C4DH30 117 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 A0A1W2PRE2 83 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 ZNF80P51504 273 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-213ENST00000527897 CRYBA4P53673 196 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 SLAQ13239 276 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 FHL2Q14192 279 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 SMUG1Q53HV7 270 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 C6orf223Q8N319 242 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 KCNS1Q96KK3 526 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 LINC00479Q96M42 142 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 MRPS16Q9Y3D3 137 aaKnown RBP10.74□□□□□ -0.69
CAPN1-213ENST00000527897 PKHD1P08F94 4074 aa10.74□□□□□ -0.69
CAPN1-213ENST00000527897 PKD1P98161 4303 aa10.73□□□□□ -0.69
CAPN1-213ENST00000527897 MAP1LC3B2A6NCE7 125 aa10.73□□□□□ -0.69
CAPN1-213ENST00000527897 M0R2P5 195 aa10.73□□□□□ -0.69
CAPN1-213ENST00000527897 IGLV2-11P01706 119 aa10.73□□□□□ -0.69
CAPN1-213ENST00000527897 TMEM75Q8N9X5 138 aa10.73□□□□□ -0.69
CAPN1-213ENST00000527897 OR4C5Q8NGB2 326 aa10.73□□□□□ -0.69
CAPN1-213ENST00000527897 RASL10AQ92737 203 aa10.73□□□□□ -0.69
CAPN1-213ENST00000527897 MAP1LC3BQ9GZQ8 125 aa10.73□□□□□ -0.69
CAPN1-213ENST00000527897 C9JCJ5 164 aa10.72□□□□□ -0.69
CAPN1-213ENST00000527897 KCNRGQ8N5I3 272 aa10.72□□□□□ -0.69
CAPN1-213ENST00000527897 PCNPQ8WW12 178 aaKnown RBP10.72□□□□□ -0.69
CAPN1-213ENST00000527897 C11orf21Q9P2W6 132 aa10.72□□□□□ -0.69
CAPN1-213ENST00000527897 TRAV4A0A0B4J268 109 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 FAM74A7A6NL05 159 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 PEX7O00628 323 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 PFN1P07737 140 aaKnown RBP10.71□□□□□ -0.69
CAPN1-213ENST00000527897 FHITP49789 147 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 PPT1P50897 306 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 MRPL23Q16540 153 aaKnown RBP10.71□□□□□ -0.69
CAPN1-213ENST00000527897 TTC32Q5I0X7 151 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 SAPCD1Q5SSQ6 148 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 OR11H4Q8NGC9 324 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 STOML3Q8TAV4 291 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 UPK3BQ9BT76 320 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 ZNF471Q9BX82 626 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-213ENST00000527897 ARL2-SNX15V9GYD0 113 aa10.71□□□□□ -0.69
CAPN1-213ENST00000527897 A0A1B0GV50 99 aa10.7□□□□□ -0.7
CAPN1-213ENST00000527897 KANTRA0A1W2PQU2 76 aa10.7□□□□□ -0.7
CAPN1-213ENST00000527897 FBLL1A6NHQ2 334 aaKnown RBP10.7□□□□□ -0.7
CAPN1-213ENST00000527897 GYPEP15421 78 aa10.7□□□□□ -0.7
CAPN1-213ENST00000527897 TNP2Q05952 138 aa10.7□□□□□ -0.7
CAPN1-213ENST00000527897 ZNF345Q14585 488 aa10.7□□□□□ -0.7
CAPN1-213ENST00000527897 CST9LP1Q5W188 147 aa10.7□□□□□ -0.7
CAPN1-213ENST00000527897 FAM213BQ8TBF2 198 aa10.7□□□□□ -0.7
CAPN1-213ENST00000527897 KRTAP1-5Q9BYS1 174 aa10.7□□□□□ -0.7
CAPN1-213ENST00000527897 NXPH4O95158 308 aa10.69□□□□□ -0.7
CAPN1-213ENST00000527897 SRIP30626 198 aa10.69□□□□□ -0.7
CAPN1-213ENST00000527897 ZNF876PQ49A33 203 aa10.69□□□□□ -0.7
CAPN1-213ENST00000527897 NEGR1Q7Z3B1 354 aa10.69□□□□□ -0.7
CAPN1-213ENST00000527897 NKX6-2Q9C056 277 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-213ENST00000527897 A0A0D9SG52 128 aa10.68□□□□□ -0.7
CAPN1-213ENST00000527897 HMSDA8MTL9 139 aa10.68□□□□□ -0.7
CAPN1-213ENST00000527897 K7EQD1 137 aa10.68□□□□□ -0.7
CAPN1-213ENST00000527897 SIVA1O15304 175 aa10.68□□□□□ -0.7
CAPN1-213ENST00000527897 BCL2L11O43521 198 aa10.68□□□□□ -0.7
CAPN1-213ENST00000527897 PFDN1O60925 122 aa10.68□□□□□ -0.7
CAPN1-213ENST00000527897 Q86TA4 180 aa10.68□□□□□ -0.7
CAPN1-213ENST00000527897 HIST1H2BAQ96A08 127 aa10.68□□□□□ -0.7
CAPN1-213ENST00000527897 KIAA1109Q2LD37 5005 aa10.67□□□□□ -0.7
CAPN1-213ENST00000527897 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
CAPN1-213ENST00000527897 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
CAPN1-213ENST00000527897 S100A4P26447 101 aaKnown RBP10.67□□□□□ -0.7
CAPN1-213ENST00000527897 UBE2G1P62253 170 aa10.67□□□□□ -0.7
CAPN1-213ENST00000527897 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
CAPN1-213ENST00000527897 NHLRC2Q8NBF2 726 aa10.67□□□□□ -0.7
CAPN1-213ENST00000527897 SFT2D1Q8WV19 159 aa10.67□□□□□ -0.7
CAPN1-213ENST00000527897 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
CAPN1-213ENST00000527897 PAGE4O60829 102 aa10.66□□□□□ -0.7
CAPN1-213ENST00000527897 ORM1P02763 201 aa10.66□□□□□ -0.7
CAPN1-213ENST00000527897 SEC11BP0C7V7 166 aa10.66□□□□□ -0.7
CAPN1-213ENST00000527897 ZNF575Q86XF7 245 aa10.66□□□□□ -0.7
CAPN1-213ENST00000527897 HERC2O95714 4834 aa10.66□□□□□ -0.7
CAPN1-213ENST00000527897 A0A1W2PPQ1 181 aa10.65□□□□□ -0.7
CAPN1-213ENST00000527897 PGPEP1LA6NFU8 196 aa10.65□□□□□ -0.7
CAPN1-213ENST00000527897 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
CAPN1-213ENST00000527897 M0R036 132 aa10.65□□□□□ -0.7
CAPN1-213ENST00000527897 DPPA3Q6W0C5 159 aa10.65□□□□□ -0.7
CAPN1-213ENST00000527897 C9orf85Q96MD7 179 aa10.65□□□□□ -0.7
CAPN1-213ENST00000527897 TXNDC17Q9BRA2 123 aa10.65□□□□□ -0.7
CAPN1-213ENST00000527897 IGKV3D-20A0A0C4DH25 116 aa10.64□□□□□ -0.71
CAPN1-213ENST00000527897 B4DEV8 164 aa10.64□□□□□ -0.71
CAPN1-213ENST00000527897 UMAD1C9J7I0 102 aa10.64□□□□□ -0.71
CAPN1-213ENST00000527897 RNASE3P12724 160 aaKnown RBP10.64□□□□□ -0.71
CAPN1-213ENST00000527897 GATA1P15976 413 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-213ENST00000527897 ASIPP42127 132 aa10.64□□□□□ -0.71
CAPN1-213ENST00000527897 AKR1C3P42330 323 aa10.64□□□□□ -0.71
CAPN1-213ENST00000527897 EIF5AP63241 154 aaKnown RBP10.64□□□□□ -0.71
CAPN1-213ENST00000527897 ZNF506Q5JVG8 444 aa10.64□□□□□ -0.71
CAPN1-213ENST00000527897 CFAP126Q5VTH2 177 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms