RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 C11orf52Q96A22 123 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 SPXQ9BT56 116 aa12.2□□□□□ -0.46
LMX1B-203ENST00000526117 IFNA1P01562 189 aa12.19□□□□□ -0.46
LMX1B-203ENST00000526117 AKR1C3P42330 323 aa12.19□□□□□ -0.46
LMX1B-203ENST00000526117 BLOC1S1P78537 153 aa12.19□□□□□ -0.46
LMX1B-203ENST00000526117 MUC21Q5SSG8 566 aa12.19□□□□□ -0.46
LMX1B-203ENST00000526117 ALKAL2Q6UX46 152 aa12.19□□□□□ -0.46
LMX1B-203ENST00000526117 GNG13Q9P2W3 67 aa12.19□□□□□ -0.46
LMX1B-203ENST00000526117 SCO2A0A1W2PP80 73 aa12.18□□□□□ -0.46
LMX1B-203ENST00000526117 LGALS9CQ6DKI2 356 aa12.18□□□□□ -0.46
LMX1B-203ENST00000526117 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
LMX1B-203ENST00000526117 SDF2L1Q9HCN8 221 aa12.18□□□□□ -0.46
LMX1B-203ENST00000526117 ALMS1Q8TCU4 4167 aa12.18□□□□□ -0.46
LMX1B-203ENST00000526117 DNAH1Q9P2D7 4330 aa12.18□□□□□ -0.46
LMX1B-203ENST00000526117 SACSQ9NZJ4 4579 aa12.17□□□□□ -0.46
LMX1B-203ENST00000526117 IGHV3-16A0A0C4DH30 117 aa12.17□□□□□ -0.46
LMX1B-203ENST00000526117 FABP5P3A8MUU1 101 aa12.17□□□□□ -0.46
LMX1B-203ENST00000526117 MEF2BQ02080 365 aaPredicted RBP12.17□□□□□ -0.46
LMX1B-203ENST00000526117 Q6ZTI0 123 aa12.17□□□□□ -0.46
LMX1B-203ENST00000526117 TMEM183AQ8IXX5 376 aa12.17□□□□□ -0.46
LMX1B-203ENST00000526117 C11orf21Q9P2W6 132 aa12.17□□□□□ -0.46
LMX1B-203ENST00000526117 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
LMX1B-203ENST00000526117 GAGE12BA1L429 117 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 PDE6DO43924 150 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 GAGE7O76087 117 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 TYMSP04818 313 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 GAGE12FP0CL80 117 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 GAGE12GP0CL81 117 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 GAGE12IP0CL82 117 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 BCL2P10415 239 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 C15orf53Q8NAA6 179 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 ZC2HC1AQ96GY0 325 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 MLST8Q9BVC4 326 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 MDFICQ9P1T7 246 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 NAGKQ9UJ70 344 aa12.16□□□□□ -0.46
LMX1B-203ENST00000526117 ZNF674Q2M3X9 581 aa12.15□□□□□ -0.46
LMX1B-203ENST00000526117 RASL10AQ92737 203 aa12.15□□□□□ -0.46
LMX1B-203ENST00000526117 VAX2Q9UIW0 290 aa12.15□□□□□ -0.46
LMX1B-203ENST00000526117 TRGV1A0A0A0MS02 117 aa12.14□□□□□ -0.47
LMX1B-203ENST00000526117 H3BNG1 76 aa12.14□□□□□ -0.47
LMX1B-203ENST00000526117 NDUFS6O75380 124 aaKnown RBP12.14□□□□□ -0.47
LMX1B-203ENST00000526117 HTN3P15516 51 aa12.14□□□□□ -0.47
LMX1B-203ENST00000526117 DNLZQ5SXM8 178 aa12.14□□□□□ -0.47
LMX1B-203ENST00000526117 FAM162BQ5T6X4 162 aa12.14□□□□□ -0.47
LMX1B-203ENST00000526117 TMEM88Q6PEY1 159 aa12.14□□□□□ -0.47
LMX1B-203ENST00000526117 PTH2Q96A98 100 aa12.14□□□□□ -0.47
LMX1B-203ENST00000526117 SMIM12Q96EX1 92 aa12.14□□□□□ -0.47
LMX1B-203ENST00000526117 GNRH2O43555 120 aa12.13□□□□□ -0.47
LMX1B-203ENST00000526117 CRIP1P50238 77 aa12.13□□□□□ -0.47
LMX1B-203ENST00000526117 C9orf85Q96MD7 179 aa12.13□□□□□ -0.47
LMX1B-203ENST00000526117 TRGV2A0A075B6R0 118 aa12.12□□□□□ -0.47
LMX1B-203ENST00000526117 F5H768 121 aa12.12□□□□□ -0.47
LMX1B-203ENST00000526117 M0R2P5 195 aa12.12□□□□□ -0.47
LMX1B-203ENST00000526117 RPL35P42766 123 aaKnown RBP12.12□□□□□ -0.47
LMX1B-203ENST00000526117 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
LMX1B-203ENST00000526117 IGKV3D-20A0A0C4DH25 116 aa12.11□□□□□ -0.47
LMX1B-203ENST00000526117 SH2D1AO60880 128 aa12.11□□□□□ -0.47
LMX1B-203ENST00000526117 P0DMU3 169 aa12.11□□□□□ -0.47
LMX1B-203ENST00000526117 FAM231AP0DMU4 169 aa12.11□□□□□ -0.47
LMX1B-203ENST00000526117 FAM231CP0DMU5 169 aa12.11□□□□□ -0.47
LMX1B-203ENST00000526117 LINC01559Q495D7 138 aa12.11□□□□□ -0.47
LMX1B-203ENST00000526117 BAGE2Q86Y30 109 aa12.11□□□□□ -0.47
LMX1B-203ENST00000526117 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
LMX1B-203ENST00000526117 KRBOX1C9JBD0 128 aa12.1□□□□□ -0.47
LMX1B-203ENST00000526117 LY6G6CO95867 125 aa12.1□□□□□ -0.47
LMX1B-203ENST00000526117 RNASE3P12724 160 aaKnown RBP12.1□□□□□ -0.47
LMX1B-203ENST00000526117 HOXA5P20719 270 aa12.1□□□□□ -0.47
LMX1B-203ENST00000526117 TEX261Q6UWH6 196 aa12.1□□□□□ -0.47
LMX1B-203ENST00000526117 B4DEV8 164 aa12.09□□□□□ -0.47
LMX1B-203ENST00000526117 TMEM250H0YL14 139 aa12.09□□□□□ -0.47
LMX1B-203ENST00000526117 CXCL1P09341 107 aa12.09□□□□□ -0.47
LMX1B-203ENST00000526117 SLAQ13239 276 aa12.09□□□□□ -0.47
LMX1B-203ENST00000526117 DERL1Q9BUN8 251 aa12.09□□□□□ -0.47
LMX1B-203ENST00000526117 IL36BQ9NZH7 164 aa12.09□□□□□ -0.47
LMX1B-203ENST00000526117 TRAV4A0A0B4J268 109 aa12.08□□□□□ -0.48
LMX1B-203ENST00000526117 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
LMX1B-203ENST00000526117 CIDEAO60543 219 aa12.08□□□□□ -0.48
LMX1B-203ENST00000526117 ORM1P02763 201 aa12.08□□□□□ -0.48
LMX1B-203ENST00000526117 ASIPP42127 132 aa12.08□□□□□ -0.48
LMX1B-203ENST00000526117 ZNF506Q5JVG8 444 aa12.08□□□□□ -0.48
LMX1B-203ENST00000526117 ZNF575Q86XF7 245 aa12.08□□□□□ -0.48
LMX1B-203ENST00000526117 VPS13DQ5THJ4 4388 aa12.08□□□□□ -0.48
LMX1B-203ENST00000526117 RNF212Q495C1 297 aa12.07□□□□□ -0.48
LMX1B-203ENST00000526117 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
LMX1B-203ENST00000526117 TRAV26-1A0A087WT03 109 aa12.06□□□□□ -0.48
LMX1B-203ENST00000526117 IGLV2-8P01709 118 aa12.06□□□□□ -0.48
LMX1B-203ENST00000526117 MED14OSP0DP75 135 aa12.06□□□□□ -0.48
LMX1B-203ENST00000526117 FAM3BP58499 235 aaPredicted RBP12.06□□□□□ -0.48
LMX1B-203ENST00000526117 OR5I1Q13606 314 aa12.06□□□□□ -0.48
LMX1B-203ENST00000526117 POM121L12Q8N7R1 296 aa12.06□□□□□ -0.48
LMX1B-203ENST00000526117 NHLRC2Q8NBF2 726 aa12.06□□□□□ -0.48
LMX1B-203ENST00000526117 FAM210AQ96ND0 272 aa12.06□□□□□ -0.48
LMX1B-203ENST00000526117 MED9Q9NWA0 146 aa12.06□□□□□ -0.48
LMX1B-203ENST00000526117 PRO0255Q9UI72 69 aa12.06□□□□□ -0.48
LMX1B-203ENST00000526117 TRBV20OR9-2A0A075B6H5 130 aa12.05□□□□□ -0.48
LMX1B-203ENST00000526117 C9JCJ5 164 aa12.05□□□□□ -0.48
LMX1B-203ENST00000526117 S100A4P26447 101 aaKnown RBP12.05□□□□□ -0.48
LMX1B-203ENST00000526117 GNG4P50150 75 aa12.05□□□□□ -0.48
LMX1B-203ENST00000526117 FHL2Q14192 279 aa12.05□□□□□ -0.48
LMX1B-203ENST00000526117 ZNF876PQ49A33 203 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms