RNA–Protein interactions for RNA: ENST00000525947.1

ROM1-203, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene ROM1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-203ENST00000525947 ARL6IP6Q8N6S5 226 aa16.72■□□□□ 0.27
ROM1-203ENST00000525947 OR4C5Q8NGB2 326 aa16.72■□□□□ 0.27
ROM1-203ENST00000525947 OR2G3Q8NGZ4 309 aa16.72■□□□□ 0.27
ROM1-203ENST00000525947 AQP10Q96PS8 301 aa16.72■□□□□ 0.27
ROM1-203ENST00000525947 SH3BGRL3Q9H299 93 aa16.72■□□□□ 0.27
ROM1-203ENST00000525947 TRAV4A0A0B4J268 109 aa16.71■□□□□ 0.27
ROM1-203ENST00000525947 BTF3P20290 206 aaKnown RBP16.71■□□□□ 0.27
ROM1-203ENST00000525947 Q6ZRN7 208 aaPredicted RBP16.71■□□□□ 0.27
ROM1-203ENST00000525947 PSMG3Q9BT73 122 aaPredicted RBP16.71■□□□□ 0.27
ROM1-203ENST00000525947 SDF2L1Q9HCN8 221 aa16.71■□□□□ 0.27
ROM1-203ENST00000525947 HSPG2P98160 4391 aa16.7■□□□□ 0.26
ROM1-203ENST00000525947 LOC100131303A0A0U1RQF7 123 aa16.7■□□□□ 0.26
ROM1-203ENST00000525947 CDK2AP2O75956 126 aa16.7■□□□□ 0.26
ROM1-203ENST00000525947 NDFIP1Q9BT67 221 aa16.7■□□□□ 0.26
ROM1-203ENST00000525947 TCRAP04437 139 aa16.69■□□□□ 0.26
ROM1-203ENST00000525947 ZNF80P51504 273 aaPredicted RBP16.69■□□□□ 0.26
ROM1-203ENST00000525947 WFDC10BQ8IUB3 73 aa16.69■□□□□ 0.26
ROM1-203ENST00000525947 MAPKAPK5-AS1Q8N8E1 139 aa16.69■□□□□ 0.26
ROM1-203ENST00000525947 C5orf17Q8NAS9 161 aa16.69■□□□□ 0.26
ROM1-203ENST00000525947 ASB13Q8WXK3 278 aa16.69■□□□□ 0.26
ROM1-203ENST00000525947 C9JCJ5 164 aa16.68■□□□□ 0.26
ROM1-203ENST00000525947 FUSP35637 526 aaKnown RBP eCLIP16.68■□□□□ 0.26
ROM1-203ENST00000525947 SUMO1P63165 101 aaKnown RBP16.68■□□□□ 0.26
ROM1-203ENST00000525947 KCNS1Q96KK3 526 aa16.68■□□□□ 0.26
ROM1-203ENST00000525947 PSG8Q9UQ74 426 aa16.68■□□□□ 0.26
ROM1-203ENST00000525947 ORM1P02763 201 aa16.67■□□□□ 0.26
ROM1-203ENST00000525947 SUN5Q8TC36 379 aa16.67■□□□□ 0.26
ROM1-203ENST00000525947 C11orf21Q9P2W6 132 aa16.67■□□□□ 0.26
ROM1-203ENST00000525947 LY96Q9Y6Y9 160 aa16.67■□□□□ 0.26
ROM1-203ENST00000525947 CXorf1O96002 111 aa16.66■□□□□ 0.26
ROM1-203ENST00000525947 MBP02144 154 aa16.66■□□□□ 0.26
ROM1-203ENST00000525947 SERF2P84101 59 aa16.66■□□□□ 0.26
ROM1-203ENST00000525947 PRNTQ86SH4 94 aa16.66■□□□□ 0.26
ROM1-203ENST00000525947 TMEM75Q8N9X5 138 aa16.66■□□□□ 0.26
ROM1-203ENST00000525947 TXNDC17Q9BRA2 123 aa16.66■□□□□ 0.26
ROM1-203ENST00000525947 ACTR3CQ9C0K3 210 aaPredicted RBP16.66■□□□□ 0.26
ROM1-203ENST00000525947 LRP1BQ9NZR2 4599 aa16.65■□□□□ 0.26
ROM1-203ENST00000525947 FXYD6-FXYD2A0A087WZ82 144 aa16.65■□□□□ 0.26
ROM1-203ENST00000525947 SERTM2A0A1B0GWG4 89 aa16.65■□□□□ 0.26
ROM1-203ENST00000525947 K7EQM0 130 aa16.65■□□□□ 0.26
ROM1-203ENST00000525947 GCGP01275 180 aa16.65■□□□□ 0.26
ROM1-203ENST00000525947 RPL7L1Q6DKI1 246 aaKnown RBP16.65■□□□□ 0.26
ROM1-203ENST00000525947 INO80EQ8NBZ0 244 aaPredicted RBP16.65■□□□□ 0.26
ROM1-203ENST00000525947 GGTLC3B5MD39 225 aa16.64■□□□□ 0.25
ROM1-203ENST00000525947 GIPP09681 153 aaPredicted RBP16.64■□□□□ 0.25
ROM1-203ENST00000525947 FLI1Q01543 452 aaPredicted RBP16.64■□□□□ 0.25
ROM1-203ENST00000525947 TMEM167BQ9NRX6 74 aa16.64■□□□□ 0.25
ROM1-203ENST00000525947 EPDR1Q9UM22 224 aa16.64■□□□□ 0.25
ROM1-203ENST00000525947 TNFSF18Q9UNG2 199 aa16.64■□□□□ 0.25
ROM1-203ENST00000525947 IGLV2-11P01706 119 aa16.63■□□□□ 0.25
ROM1-203ENST00000525947 NHLRC2Q8NBF2 726 aa16.63■□□□□ 0.25
ROM1-203ENST00000525947 TRAV9-2A0A087WT02 112 aa16.62■□□□□ 0.25
ROM1-203ENST00000525947 IGHV3-73A0A0B4J1V6 119 aa16.62■□□□□ 0.25
ROM1-203ENST00000525947 RNF222A6NCQ9 220 aa16.62■□□□□ 0.25
ROM1-203ENST00000525947 TAAR5O14804 337 aa16.62■□□□□ 0.25
ROM1-203ENST00000525947 GATA1P15976 413 aaPredicted RBP16.62■□□□□ 0.25
ROM1-203ENST00000525947 ZNF876PQ49A33 203 aa16.62■□□□□ 0.25
ROM1-203ENST00000525947 SMUG1Q53HV7 270 aa16.62■□□□□ 0.25
ROM1-203ENST00000525947 DPPA3Q6W0C5 159 aa16.62■□□□□ 0.25
ROM1-203ENST00000525947 ABCA13Q86UQ4 5058 aa16.61■□□□□ 0.25
ROM1-203ENST00000525947 FBLL1A6NHQ2 334 aaKnown RBP16.61■□□□□ 0.25
ROM1-203ENST00000525947 ERVFC1-1P60608 527 aa16.61■□□□□ 0.25
ROM1-203ENST00000525947 ZFP69Q49AA0 526 aa16.61■□□□□ 0.25
ROM1-203ENST00000525947 CYB561D1Q8N8Q1 229 aa16.61■□□□□ 0.25
ROM1-203ENST00000525947 LINC00479Q96M42 142 aa16.61■□□□□ 0.25
ROM1-203ENST00000525947 BORCS7-ASMTA0A0B4J1R7 106 aa16.6■□□□□ 0.25
ROM1-203ENST00000525947 TRAV34A0A0B4J273 112 aa16.6■□□□□ 0.25
ROM1-203ENST00000525947 EREGO14944 169 aa16.6■□□□□ 0.25
ROM1-203ENST00000525947 EVI2AP22794 236 aa16.6■□□□□ 0.25
ROM1-203ENST00000525947 UBE2G2P60604 165 aa16.6■□□□□ 0.25
ROM1-203ENST00000525947 ZNF726P1Q15940 193 aa16.6■□□□□ 0.25
ROM1-203ENST00000525947 NFE4Q86UQ8 179 aa16.6■□□□□ 0.25
ROM1-203ENST00000525947 MSRB1Q9NZV6 116 aa16.6■□□□□ 0.25
ROM1-203ENST00000525947 PGPEP1LA6NFU8 196 aa16.59■□□□□ 0.25
ROM1-203ENST00000525947 PFN1P07737 140 aaKnown RBP16.59■□□□□ 0.25
ROM1-203ENST00000525947 DNAH10OSP0CZ25 163 aa16.59■□□□□ 0.25
ROM1-203ENST00000525947 CFAP126Q5VTH2 177 aa16.59■□□□□ 0.25
ROM1-203ENST00000525947 RS1O15537 224 aa16.58■□□□□ 0.24
ROM1-203ENST00000525947 PPT1P50897 306 aa16.58■□□□□ 0.24
ROM1-203ENST00000525947 FGF8P55075 233 aaPredicted RBP16.58■□□□□ 0.24
ROM1-203ENST00000525947 SLC25A29Q8N8R3 303 aa16.58■□□□□ 0.24
ROM1-203ENST00000525947 OR2T35Q8NGX2 323 aa16.58■□□□□ 0.24
ROM1-203ENST00000525947 C9orf85Q96MD7 179 aa16.58■□□□□ 0.24
ROM1-203ENST00000525947 IFNA7P01567 189 aa16.57■□□□□ 0.24
ROM1-203ENST00000525947 CTXND1A0A1B0GTU2 59 aa16.56■□□□□ 0.24
ROM1-203ENST00000525947 A0A1W2PRE2 83 aa16.56■□□□□ 0.24
ROM1-203ENST00000525947 CRYGDP07320 174 aa16.56■□□□□ 0.24
ROM1-203ENST00000525947 ZNF506Q5JVG8 444 aa16.56■□□□□ 0.24
ROM1-203ENST00000525947 SAPCD1Q5SSQ6 148 aa16.56■□□□□ 0.24
ROM1-203ENST00000525947 SH2D6Q7Z4S9 175 aa16.56■□□□□ 0.24
ROM1-203ENST00000525947 SCRT2Q9NQ03 307 aa16.56■□□□□ 0.24
ROM1-203ENST00000525947 APOBP04114 4563 aaKnown RBP16.56■□□□□ 0.24
ROM1-203ENST00000525947 DNAH5Q8TE73 4624 aa16.55■□□□□ 0.24
ROM1-203ENST00000525947 A0A087WTM6 91 aa16.55■□□□□ 0.24
ROM1-203ENST00000525947 RNASE3P12724 160 aaKnown RBP16.55■□□□□ 0.24
ROM1-203ENST00000525947 PRADC1Q9BSG0 188 aa16.55■□□□□ 0.24
ROM1-203ENST00000525947 PGPEP1Q9NXJ5 209 aa16.55■□□□□ 0.24
ROM1-203ENST00000525947 ARL2-SNX15V9GYD0 113 aa16.55■□□□□ 0.24
ROM1-203ENST00000525947 AKR1C8PQ5T2L2 129 aa16.54■□□□□ 0.24
ROM1-203ENST00000525947 Q8N1X5 172 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms