RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 IGHV3-16A0A0C4DH30 117 aa12.86□□□□□ -0.35
TSPAN4-215ENST00000525334 IFNA7P01567 189 aa12.86□□□□□ -0.35
TSPAN4-215ENST00000525334 TYMSP04818 313 aa12.86□□□□□ -0.35
TSPAN4-215ENST00000525334 SEC11BP0C7V7 166 aa12.86□□□□□ -0.35
TSPAN4-215ENST00000525334 ZNRF2Q8NHG8 242 aa12.86□□□□□ -0.35
TSPAN4-215ENST00000525334 LINC00479Q96M42 142 aa12.86□□□□□ -0.35
TSPAN4-215ENST00000525334 SPXQ9BT56 116 aa12.86□□□□□ -0.35
TSPAN4-215ENST00000525334 SDF2L1Q9HCN8 221 aa12.86□□□□□ -0.35
TSPAN4-215ENST00000525334 FBLL1A6NHQ2 334 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-215ENST00000525334 PEX7O00628 323 aa12.85□□□□□ -0.35
TSPAN4-215ENST00000525334 GCGP01275 180 aa12.85□□□□□ -0.35
TSPAN4-215ENST00000525334 KCNS1Q96KK3 526 aa12.85□□□□□ -0.35
TSPAN4-215ENST00000525334 NKX6-2Q9C056 277 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-215ENST00000525334 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
TSPAN4-215ENST00000525334 ZFP69Q49AA0 526 aa12.84□□□□□ -0.35
TSPAN4-215ENST00000525334 SMUG1Q53HV7 270 aa12.84□□□□□ -0.35
TSPAN4-215ENST00000525334 TMUB2Q71RG4 321 aa12.84□□□□□ -0.35
TSPAN4-215ENST00000525334 STOML3Q8TAV4 291 aa12.84□□□□□ -0.35
TSPAN4-215ENST00000525334 RASL10AQ92737 203 aa12.84□□□□□ -0.35
TSPAN4-215ENST00000525334 C11orf21Q9P2W6 132 aa12.84□□□□□ -0.35
TSPAN4-215ENST00000525334 UMAD1C9J7I0 102 aa12.83□□□□□ -0.36
TSPAN4-215ENST00000525334 RTL8CO15255 209 aa12.83□□□□□ -0.36
TSPAN4-215ENST00000525334 PFDN1O60925 122 aa12.83□□□□□ -0.36
TSPAN4-215ENST00000525334 PFN1P07737 140 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-215ENST00000525334 PPT1P50897 306 aa12.83□□□□□ -0.36
TSPAN4-215ENST00000525334 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
TSPAN4-215ENST00000525334 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
TSPAN4-215ENST00000525334 FAM213BQ8TBF2 198 aa12.83□□□□□ -0.36
TSPAN4-215ENST00000525334 A0A096LPF7 62 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 M0R2P5 195 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 PAX4O43316 350 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 SFTA3P0C7M3 94 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 EIF5AP63241 154 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 FHL2Q14192 279 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 Q86TA4 180 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 HIST1H2BAQ96A08 127 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 ZNF479Q96JC4 524 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 KRTAP17-1Q9BYP8 105 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 PRO0255Q9UI72 69 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 ARL2-SNX15V9GYD0 113 aa12.82□□□□□ -0.36
TSPAN4-215ENST00000525334 ESRGQ1W209 222 aa12.81□□□□□ -0.36
TSPAN4-215ENST00000525334 TCTE3Q8IZS6 198 aa12.81□□□□□ -0.36
TSPAN4-215ENST00000525334 SFT2D1Q8WV19 159 aa12.81□□□□□ -0.36
TSPAN4-215ENST00000525334 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
TSPAN4-215ENST00000525334 HHLA3Q9XRX5 114 aa12.81□□□□□ -0.36
TSPAN4-215ENST00000525334 TPT1P13693 172 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-215ENST00000525334 CRYBA4P53673 196 aa12.8□□□□□ -0.36
TSPAN4-215ENST00000525334 SLAQ13239 276 aa12.8□□□□□ -0.36
TSPAN4-215ENST00000525334 CST9LP1Q5W188 147 aa12.8□□□□□ -0.36
TSPAN4-215ENST00000525334 DPPA3Q6W0C5 159 aa12.8□□□□□ -0.36
TSPAN4-215ENST00000525334 Q6ZNX1 250 aa12.8□□□□□ -0.36
TSPAN4-215ENST00000525334 TRGV4A0A0C4DH28 118 aa12.79□□□□□ -0.36
TSPAN4-215ENST00000525334 NBDYA0A0U1RRE5 68 aa12.79□□□□□ -0.36
TSPAN4-215ENST00000525334 A0A1B0GV50 99 aa12.79□□□□□ -0.36
TSPAN4-215ENST00000525334 ICOSQ9Y6W8 199 aa12.79□□□□□ -0.36
TSPAN4-215ENST00000525334 TRAV4A0A0B4J268 109 aa12.78□□□□□ -0.36
TSPAN4-215ENST00000525334 PAGE4O60829 102 aa12.78□□□□□ -0.36
TSPAN4-215ENST00000525334 TCEAL7Q9BRU2 100 aa12.78□□□□□ -0.36
TSPAN4-215ENST00000525334 UPK3BQ9BT76 320 aa12.78□□□□□ -0.36
TSPAN4-215ENST00000525334 MRPS16Q9Y3D3 137 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-215ENST00000525334 PRSS29PA6NIE9 313 aa12.77□□□□□ -0.37
TSPAN4-215ENST00000525334 UBE2G1P62253 170 aa12.77□□□□□ -0.37
TSPAN4-215ENST00000525334 LGALSLQ3ZCW2 172 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-215ENST00000525334 C1orf134Q5TEV5 83 aa12.77□□□□□ -0.37
TSPAN4-215ENST00000525334 OR4C5Q8NGB2 326 aa12.77□□□□□ -0.37
TSPAN4-215ENST00000525334 FMC1Q96HJ9 113 aa12.77□□□□□ -0.37
TSPAN4-215ENST00000525334 C9orf85Q96MD7 179 aa12.77□□□□□ -0.37
TSPAN4-215ENST00000525334 Q9H8V8 135 aa12.77□□□□□ -0.37
TSPAN4-215ENST00000525334 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
TSPAN4-215ENST00000525334 C9JCJ5 164 aa12.76□□□□□ -0.37
TSPAN4-215ENST00000525334 H2AFB1P0C5Y9 115 aa12.76□□□□□ -0.37
TSPAN4-215ENST00000525334 SOHLH1Q5JUK2 328 aa12.76□□□□□ -0.37
TSPAN4-215ENST00000525334 ZC2HC1AQ96GY0 325 aa12.76□□□□□ -0.37
TSPAN4-215ENST00000525334 ZFP30Q9Y2G7 519 aa12.76□□□□□ -0.37
TSPAN4-215ENST00000525334 A0A1B0GVY2 172 aa12.75□□□□□ -0.37
TSPAN4-215ENST00000525334 FABP5P3A8MUU1 101 aa12.75□□□□□ -0.37
TSPAN4-215ENST00000525334 RNASE3P12724 160 aaKnown RBP12.75□□□□□ -0.37
TSPAN4-215ENST00000525334 AKR1C3P42330 323 aa12.75□□□□□ -0.37
TSPAN4-215ENST00000525334 ZNF876PQ49A33 203 aa12.75□□□□□ -0.37
TSPAN4-215ENST00000525334 COX8CQ7Z4L0 72 aa12.75□□□□□ -0.37
TSPAN4-215ENST00000525334 TRBV6-1A0A0K0K1D8 114 aa12.74□□□□□ -0.37
TSPAN4-215ENST00000525334 C1QBP02746 253 aa12.74□□□□□ -0.37
TSPAN4-215ENST00000525334 CRIP1P50238 77 aa12.74□□□□□ -0.37
TSPAN4-215ENST00000525334 MRPL23Q16540 153 aaKnown RBP12.74□□□□□ -0.37
TSPAN4-215ENST00000525334 hCG_2014768A0A024R1R8 64 aa12.73□□□□□ -0.37
TSPAN4-215ENST00000525334 K7EQD1 137 aa12.73□□□□□ -0.37
TSPAN4-215ENST00000525334 LTAP01374 205 aa12.73□□□□□ -0.37
TSPAN4-215ENST00000525334 GYPEP15421 78 aa12.73□□□□□ -0.37
TSPAN4-215ENST00000525334 KRTAP1-5Q9BYS1 174 aa12.73□□□□□ -0.37
TSPAN4-215ENST00000525334 PKD1P98161 4303 aa12.73□□□□□ -0.37
TSPAN4-215ENST00000525334 SCO2A0A1W2PP80 73 aa12.72□□□□□ -0.37
TSPAN4-215ENST00000525334 PGPEP1LA6NFU8 196 aa12.72□□□□□ -0.37
TSPAN4-215ENST00000525334 SH2D1AO60880 128 aa12.72□□□□□ -0.37
TSPAN4-215ENST00000525334 ORM1P02763 201 aa12.72□□□□□ -0.37
TSPAN4-215ENST00000525334 ZNF506Q5JVG8 444 aa12.72□□□□□ -0.37
TSPAN4-215ENST00000525334 CFAP126Q5VTH2 177 aa12.72□□□□□ -0.37
TSPAN4-215ENST00000525334 EIF5AL1Q6IS14 154 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-215ENST00000525334 AKAP14Q86UN6 197 aa12.72□□□□□ -0.37
TSPAN4-215ENST00000525334 C6orf223Q8N319 242 aa12.72□□□□□ -0.37
TSPAN4-215ENST00000525334 PCNPQ8WW12 178 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms