RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 H3BRN7 92 aa10.84□□□□□ -0.67
LRRK1-202ENST00000525284 ZNF747Q9BV97 191 aa10.84□□□□□ -0.67
LRRK1-202ENST00000525284 LRCOL1A6NCL2 159 aa10.84□□□□□ -0.67
LRRK1-202ENST00000525284 FAM231DQ6ZW35 169 aa10.84□□□□□ -0.67
LRRK1-202ENST00000525284 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
LRRK1-202ENST00000525284 FOXI1Q12951 378 aa10.84□□□□□ -0.67
LRRK1-202ENST00000525284 VOPP1Q96AW1 172 aa10.84□□□□□ -0.67
LRRK1-202ENST00000525284 LGALS9O00182 355 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 MESP1Q9BRJ9 268 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 COX7A2LO14548 114 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 GATA1P15976 413 aaPredicted RBP10.83□□□□□ -0.68
LRRK1-202ENST00000525284 ZNF726P1Q15940 193 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 FAM120AOSQ5T036 256 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 UPK3BQ9BT76 320 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 PATJQ8NI35 1801 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 JMJD7-PLA2G4BH0Y9G9 81 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 NDUFA4O00483 81 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 RNASE8Q8TDE3 154 aaKnown RBP10.83□□□□□ -0.68
LRRK1-202ENST00000525284 SCN4AP35499 1836 aa10.83□□□□□ -0.68
LRRK1-202ENST00000525284 TRBV6-6A0A0A6YYG2 114 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 IGHV2-70DA0A0C4DH43 119 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 EPOPA6NHQ4 379 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 PRR15LQ9BU68 103 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 MYOFQ9NZM1 2061 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 INTS1Q8N201 2190 aaKnown RBP10.82□□□□□ -0.68
LRRK1-202ENST00000525284 LRRK1Q38SD2 2015 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 G3V4G9 280 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 Q6ZUT4 128 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 GGNQ86UU5 652 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 Q96MF0 132 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 NDUFA4L2Q9NRX3 87 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 RALGAPA2Q2PPJ7 1873 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 A0A0G2JNJ9 132 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 C20orf197Q8N268 126 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 Q9UFV3 132 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 A0A0G2JMZ2 1700 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 LRRC37A2A6NM11 1700 aa10.82□□□□□ -0.68
LRRK1-202ENST00000525284 IGHV2-5P01817 119 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 CDPF1Q6NVV7 123 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 TMEM14BQ9NUH8 114 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 NDUFC2-KCTD14E9PQ53 114 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 IGLV3-32A0A0A0MS00 114 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 H3BQ85 93 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 FAM236DA0A1B0GTK5 79 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 FAM236CP0DP71 79 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 ABCA7Q8IZY2 2146 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 MSMBP08118 114 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 FANCD2OSQ96PS1 177 aa10.81□□□□□ -0.68
LRRK1-202ENST00000525284 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
LRRK1-202ENST00000525284 RPL39LQ96EH5 51 aaKnown RBP10.8□□□□□ -0.68
LRRK1-202ENST00000525284 IGHV4-30-2A0A087WSY4 118 aa10.8□□□□□ -0.68
LRRK1-202ENST00000525284 GYPEP15421 78 aa10.8□□□□□ -0.68
LRRK1-202ENST00000525284 WI2-2373I1.2A0A1W2PRP0 233 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 ZNF883P0CG24 379 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 WFDC11Q8NEX6 87 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 ESM1Q9NQ30 184 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 ANKRD36A6QL64 1941 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 A0A0J9YWU9 116 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 A0A0J9YXV3 536 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 LTBP1Q14766 1721 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 PRR20EP86478 221 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 PRR20CP86479 221 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 PRR20DP86480 221 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 PRR20BP86481 221 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 PRR20AP86496 221 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 DIRC1Q969H9 104 aa10.79□□□□□ -0.68
LRRK1-202ENST00000525284 IGHV7-4-1A0A0J9YVY3 117 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 TRBV10-2A0A0K0K1G8 114 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 NDUFV3P56181 108 aaKnown RBP10.78□□□□□ -0.68
LRRK1-202ENST00000525284 LINC01545Q5VT33 79 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 RNF152Q8N8N0 203 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 C17orf77Q96MU5 243 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 IGHV1-69DA0A0B4J2H0 117 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 IGHV1-69P01742 117 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 CACNA1IQ9P0X4 2223 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 IGLV3-9A0A075B6K5 115 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 SP5Q6BEB4 398 aaPredicted RBP10.78□□□□□ -0.68
LRRK1-202ENST00000525284 CADP27708 2225 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 FXYD2P54710 66 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.78□□□□□ -0.68
LRRK1-202ENST00000525284 BPY2O14599 106 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 DOCK11Q5JSL3 2073 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 A6NED7 52 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 QRFPP83859 136 aa10.78□□□□□ -0.68
LRRK1-202ENST00000525284 IGLV3-12A0A075B6K2 115 aa10.77□□□□□ -0.68
LRRK1-202ENST00000525284 FXYD5Q96DB9 178 aa10.77□□□□□ -0.68
LRRK1-202ENST00000525284 GREB1Q4ZG55 1949 aa10.77□□□□□ -0.68
LRRK1-202ENST00000525284 K7EN84 100 aa10.77□□□□□ -0.69
LRRK1-202ENST00000525284 CTSGP08311 255 aa10.77□□□□□ -0.69
LRRK1-202ENST00000525284 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
LRRK1-202ENST00000525284 TNS1Q9HBL0 1735 aaKnown RBP10.77□□□□□ -0.69
LRRK1-202ENST00000525284 TMEM256-PLSCR3K7ERE1 68 aa10.77□□□□□ -0.69
LRRK1-202ENST00000525284 LOXL1Q08397 574 aaPredicted RBP10.77□□□□□ -0.69
LRRK1-202ENST00000525284 PTH2Q96A98 100 aa10.77□□□□□ -0.69
LRRK1-202ENST00000525284 TPSG1Q9NRR2 321 aa10.77□□□□□ -0.69
LRRK1-202ENST00000525284 FAM186AA6NE01 2351 aa10.76□□□□□ -0.69
LRRK1-202ENST00000525284 NDUFA1O15239 70 aa10.76□□□□□ -0.69
LRRK1-202ENST00000525284 SCXQ7RTU7 201 aa10.76□□□□□ -0.69
LRRK1-202ENST00000525284 ATP6V0E2Q8NHE4 81 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms