RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 Q6ZVH6 145 aa13.38□□□□□ -0.27
BEST1-203ENST00000524877 RMI2Q96E14 147 aa13.38□□□□□ -0.27
BEST1-203ENST00000524877 IGHV4OR15-8A0A075B7B6 117 aa13.37□□□□□ -0.27
BEST1-203ENST00000524877 A0A087WW49 117 aa13.37□□□□□ -0.27
BEST1-203ENST00000524877 IGKV3D-20A0A0C4DH25 116 aa13.37□□□□□ -0.27
BEST1-203ENST00000524877 IGLC1P0CG04 106 aa13.37□□□□□ -0.27
BEST1-203ENST00000524877 C10orf91Q5T1B1 145 aa13.37□□□□□ -0.27
BEST1-203ENST00000524877 IGHG2P01859 326 aa13.37□□□□□ -0.27
BEST1-203ENST00000524877 CLUHP3Q96NS8 147 aa13.37□□□□□ -0.27
BEST1-203ENST00000524877 SLC25A20O43772 301 aa13.36□□□□□ -0.27
BEST1-203ENST00000524877 LYL1P12980 280 aa13.36□□□□□ -0.27
BEST1-203ENST00000524877 NPC2P61916 151 aa13.36□□□□□ -0.27
BEST1-203ENST00000524877 AJUBAQ96IF1 538 aa13.36□□□□□ -0.27
BEST1-203ENST00000524877 DEFB125Q8N687 156 aa13.36□□□□□ -0.27
BEST1-203ENST00000524877 SMAD5-AS1Q9Y6J3 95 aa13.35□□□□□ -0.27
BEST1-203ENST00000524877 COX8AP10176 69 aa13.35□□□□□ -0.27
BEST1-203ENST00000524877 IGLL1P15814 213 aa13.35□□□□□ -0.27
BEST1-203ENST00000524877 PFN1P07737 140 aaKnown RBP13.35□□□□□ -0.27
BEST1-203ENST00000524877 TRAV12-2A0A075B6T6 113 aa13.35□□□□□ -0.27
BEST1-203ENST00000524877 IGLV1-47P01700 117 aa13.35□□□□□ -0.27
BEST1-203ENST00000524877 TMEM243Q9BU79 118 aa13.35□□□□□ -0.27
BEST1-203ENST00000524877 C14orf178Q8N769 122 aaPredicted RBP13.34□□□□□ -0.27
BEST1-203ENST00000524877 VCYO14598 125 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 C22orf34Q6ZV56 151 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 A0A087WWL8 130 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 TRAV25A0A0B4J276 109 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 SS18Q15532 418 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 PIFOQ8TCI5 191 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 RITA1Q96K30 269 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 RNF183Q96D59 192 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 MBD6Q96DN6 1003 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 PRSS29PA6NIE9 313 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 SRSF2Q01130 221 aaKnown RBP13.34□□□□□ -0.27
BEST1-203ENST00000524877 DNAJC30Q96LL9 226 aa13.34□□□□□ -0.27
BEST1-203ENST00000524877 LY96Q9Y6Y9 160 aa13.33□□□□□ -0.28
BEST1-203ENST00000524877 IL17DQ8TAD2 202 aa13.33□□□□□ -0.28
BEST1-203ENST00000524877 TRPT1Q86TN4 253 aaKnown RBP13.33□□□□□ -0.28
BEST1-203ENST00000524877 PCDH15Q96QU1 1955 aa13.33□□□□□ -0.28
BEST1-203ENST00000524877 TRAV13-1A0A0B4J241 112 aa13.33□□□□□ -0.28
BEST1-203ENST00000524877 LY6G5BQ8NDX9 201 aa13.32□□□□□ -0.28
BEST1-203ENST00000524877 WIPF2Q8TF74 440 aaPredicted RBP13.32□□□□□ -0.28
BEST1-203ENST00000524877 IGLV11-55A0A075B6I3 123 aa13.32□□□□□ -0.28
BEST1-203ENST00000524877 LAGE3Q14657 143 aa13.32□□□□□ -0.28
BEST1-203ENST00000524877 ZC2HC1BQ5TFG8 222 aa13.32□□□□□ -0.28
BEST1-203ENST00000524877 ARMS2P0C7Q2 107 aa13.32□□□□□ -0.28
BEST1-203ENST00000524877 ODF3BA8MYP8 253 aa13.32□□□□□ -0.28
BEST1-203ENST00000524877 IGHV1-24A0A0C4DH33 117 aa13.31□□□□□ -0.28
BEST1-203ENST00000524877 ZNF491Q8N8L2 437 aa13.31□□□□□ -0.28
BEST1-203ENST00000524877 U3KQE9 123 aa13.31□□□□□ -0.28
BEST1-203ENST00000524877 GTF3C1Q12789 2109 aa13.31□□□□□ -0.28
BEST1-203ENST00000524877 KLK5Q9Y337 293 aaPredicted RBP13.31□□□□□ -0.28
BEST1-203ENST00000524877 APRG1Q8IVJ8 170 aa13.3□□□□□ -0.28
BEST1-203ENST00000524877 LYPD6BQ8NI32 183 aa13.3□□□□□ -0.28
BEST1-203ENST00000524877 C8orf49Q96NF6 230 aa13.3□□□□□ -0.28
BEST1-203ENST00000524877 TRBV25-1A0A075B6N4 114 aa13.3□□□□□ -0.28
BEST1-203ENST00000524877 SOCS3O14543 225 aa13.3□□□□□ -0.28
BEST1-203ENST00000524877 ATOX1O00244 68 aa13.3□□□□□ -0.28
BEST1-203ENST00000524877 IGHG4P01861 327 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 MRPL53Q96EL3 112 aaKnown RBP13.29□□□□□ -0.28
BEST1-203ENST00000524877 C2orf70A6NJV1 201 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 PAX4O43316 350 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 OTOGLQ3ZCN5 2332 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 C9JQL5 133 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 SIVA1O15304 175 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 SPATA25Q9BR10 227 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 IGHV3-16A0A0C4DH30 117 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 SH2D6Q7Z4S9 175 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 GATD1Q8NB37 220 aa13.29□□□□□ -0.28
BEST1-203ENST00000524877 SPANXB1Q9NS25 103 aaPredicted RBP13.28□□□□□ -0.28
BEST1-203ENST00000524877 POLEQ07864 2286 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 PLEKHB2Q96CS7 222 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 MPDZO75970 2070 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 NCKAP5O14513 1909 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 IGLV2-23P01705 113 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 VWC2Q2TAL6 325 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 AMTNQ6UX39 209 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 CEND1Q8N111 149 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 TNRC6AQ8NDV7 1962 aaKnown RBP13.28□□□□□ -0.28
BEST1-203ENST00000524877 SPART-AS1P0CW21 52 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 IGF2BP2-AS1Q96M15 143 aa13.28□□□□□ -0.28
BEST1-203ENST00000524877 PKDREJQ9NTG1 2253 aa13.27□□□□□ -0.28
BEST1-203ENST00000524877 I3L2K1 104 aa13.27□□□□□ -0.28
BEST1-203ENST00000524877 K7EMT4 169 aa13.27□□□□□ -0.28
BEST1-203ENST00000524877 HAPLN4Q86UW8 402 aa13.27□□□□□ -0.28
BEST1-203ENST00000524877 GPHB5Q86YW7 130 aa13.27□□□□□ -0.28
BEST1-203ENST00000524877 RNF152Q8N8N0 203 aa13.27□□□□□ -0.28
BEST1-203ENST00000524877 PTH2Q96A98 100 aa13.27□□□□□ -0.29
BEST1-203ENST00000524877 C16orf74Q96GX8 76 aa13.27□□□□□ -0.29
BEST1-203ENST00000524877 RBX1P62877 108 aa13.26□□□□□ -0.29
BEST1-203ENST00000524877 GFRA4Q9GZZ7 299 aa13.26□□□□□ -0.29
BEST1-203ENST00000524877 LRP4O75096 1905 aa13.26□□□□□ -0.29
BEST1-203ENST00000524877 TP53BP1Q12888 1972 aaPredicted RBP13.26□□□□□ -0.29
BEST1-203ENST00000524877 A0A0U1RQV1 116 aa13.26□□□□□ -0.29
BEST1-203ENST00000524877 D6R8Y8 96 aa13.26□□□□□ -0.29
BEST1-203ENST00000524877 TAL2Q16559 108 aa13.26□□□□□ -0.29
BEST1-203ENST00000524877 C1orf159Q96HA4 380 aa13.26□□□□□ -0.29
BEST1-203ENST00000524877 NOP10Q9NPE3 64 aaKnown RBP13.26□□□□□ -0.29
BEST1-203ENST00000524877 ZNF625Q96I27 306 aaPredicted RBP13.26□□□□□ -0.29
BEST1-203ENST00000524877 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
BEST1-203ENST00000524877 WIPF3A6NGB9 483 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms