RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 RPUSD1Q9UJJ7 312 aaKnown RBP1.83□□□□□ -2.12
SKP1-212ENST00000523966 URGCP-MRPS24S4R325 110 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 TANC2Q9HCD6 1990 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 IGSF10Q6WRI0 2623 aa1.83□□□□□ -2.12
SKP1-212ENST00000523966 KALRNO60229 2985 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 IGKV1D-37A0A075B6S9 117 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 IGHV3OR15-7A0A075B7D8 119 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 B4DEV8 164 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 G3V3Q6 166 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 SMLR1H3BR10 107 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 M0R1W7 72 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 DEDDO75618 318 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 ADAP1O75689 374 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 SIX6O95475 246 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 APOA2P02652 100 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 FBP1P09467 338 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 TPT1P13693 172 aaKnown RBP1.82□□□□□ -2.12
SKP1-212ENST00000523966 S100A1P23297 94 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 NFYBP25208 207 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 RPL12P30050 165 aaKnown RBP1.82□□□□□ -2.12
SKP1-212ENST00000523966 PPP1CCP36873 323 aaKnown RBP1.82□□□□□ -2.12
SKP1-212ENST00000523966 RAB13P51153 203 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 TAS2R30P59541 319 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 S100A10P60903 97 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 UBA52P62987 128 aaKnown RBP1.82□□□□□ -2.12
SKP1-212ENST00000523966 NMSQ5H8A3 153 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 FAM201AQ5SY85 155 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 TEX261Q6UWH6 196 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 STX12Q86Y82 276 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 SELENOHQ8IZQ5 122 aaKnown RBP1.82□□□□□ -2.12
SKP1-212ENST00000523966 KCNRGQ8N5I3 272 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 LINC00311Q8N616 119 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 FAM216BQ8N7L0 139 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 OR4P4Q8NGL7 312 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 OR10X1Q8NGY0 326 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 VSTM2AQ8TAG5 236 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 STOML3Q8TAV4 291 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 H1FXQ92522 213 aaKnown RBP1.82□□□□□ -2.12
SKP1-212ENST00000523966 AQP10Q96PS8 301 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 CIB3Q96Q77 187 aaPredicted RBP1.82□□□□□ -2.12
SKP1-212ENST00000523966 TP53RKQ96S44 253 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 IDI2-AS1Q9NZ38 188 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 TNFSF18Q9UNG2 199 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 AMMECR1Q9Y4X0 333 aaPredicted RBP1.82□□□□□ -2.12
SKP1-212ENST00000523966 U3KQ87 197 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 ZFHX4Q86UP3 3567 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 CCDC168Q8NDH2 2452 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 PLXNB1O43157 2135 aa1.82□□□□□ -2.12
SKP1-212ENST00000523966 ARHGAP32A7KAX9 2087 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 CFAP46Q8IYW2 2715 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 TRAV14DV4A0A0A6YYC5 116 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 SDHAF1A6NFY7 115 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 C17orf98A8MV24 154 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 OOSP1A8MZH6 123 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 UMAD1C9J7I0 102 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 SLC25A20O43772 301 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 PITX3O75364 302 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 COX6B1P14854 86 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 CXCL2P19875 107 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 LPAR6P43657 344 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 SULT1A2P50226 295 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 RAB5CP51148 216 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 ZNF137PP52743 207 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 SPCS3P61009 180 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 IFITM2Q01629 132 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 LTC4SQ16873 150 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 SPRNQ5BIV9 151 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 Q5BKY6 102 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 CLLU1Q5K131 121 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 MINOS1Q5TGZ0 78 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 FAM19A3Q7Z5A8 133 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 BAP18Q8IXM2 172 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 PDZD9Q8IXQ8 264 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 OR13D1Q8NGV5 346 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 LHFPL5Q8TAF8 219 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 GPR146Q96CH1 333 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 GNPNAT1Q96EK6 184 aaPredicted RBP1.81□□□□□ -2.12
SKP1-212ENST00000523966 CCL19Q99731 98 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 B9D2Q9BPU9 175 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 ZNF471Q9BX82 626 aaPredicted RBP1.81□□□□□ -2.12
SKP1-212ENST00000523966 TMEM133Q9H2Q1 129 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 ENY2Q9NPA8 101 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 C19orf12Q9NSK7 152 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 LYRM2Q9NU23 88 aaPredicted RBP1.81□□□□□ -2.12
SKP1-212ENST00000523966 VPREB3Q9UKI3 123 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 PRNDQ9UKY0 176 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 WASHC3Q9Y3C0 194 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 LSM5Q9Y4Y9 91 aaKnown RBP1.81□□□□□ -2.12
SKP1-212ENST00000523966 MINOS1-NBL1R4GNA1 71 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 TLN2Q9Y4G6 2542 aa1.81□□□□□ -2.12
SKP1-212ENST00000523966 HELZ2Q9BYK8 2649 aaKnown RBP1.81□□□□□ -2.12
SKP1-212ENST00000523966 COL12A1Q99715 3063 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 ABCA12Q86UK0 2595 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 FLNCQ14315 2725 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 CHD6Q8TD26 2715 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 NBEAQ8NFP9 2946 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 A0A1W2PNM2 257 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 LINC00862A6NCI5 91 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 CEBPZOSA8MTT3 80 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 FNDC10F2Z333 226 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms