RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 ZFHX4Q86UP3 3567 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 TRBV7-1A0A0A6YYK4 115 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 SMIM27A0A1W2PRY6 76 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 IQCF6A8MYZ5 107 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 C16orf97H3BN30 126 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 SNRNP200O75643 2136 aaKnown RBP4.86□□□□□ -1.63
SDC2-208ENST00000523877 SAA1P0DJI8 122 aaPredicted RBP4.86□□□□□ -1.63
SDC2-208ENST00000523877 MRPL51Q4U2R6 128 aaKnown RBP4.86□□□□□ -1.63
SDC2-208ENST00000523877 Q6JHZ5 121 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 FAM72BQ86X60 149 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 RPRMLQ8N4K4 120 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 DAND5Q8N907 189 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 ATXN7L3BQ96GX2 97 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 ZNF414Q96IQ9 312 aa4.86□□□□□ -1.63
SDC2-208ENST00000523877 ZNF71Q9NQZ8 489 aaPredicted RBP4.86□□□□□ -1.63
SDC2-208ENST00000523877 IGHV1OR15-9A0A0B4J2B8 117 aa4.85□□□□□ -1.63
SDC2-208ENST00000523877 LINC01549A6NIU2 74 aa4.85□□□□□ -1.63
SDC2-208ENST00000523877 HMGN2P05204 90 aaKnown RBP4.85□□□□□ -1.63
SDC2-208ENST00000523877 CD28P10747 220 aa4.85□□□□□ -1.63
SDC2-208ENST00000523877 C2orf82Q6UX34 121 aa4.85□□□□□ -1.63
SDC2-208ENST00000523877 V9GYV3 84 aa4.85□□□□□ -1.63
SDC2-208ENST00000523877 PHF3Q92576 2039 aaKnown RBP4.85□□□□□ -1.63
SDC2-208ENST00000523877 TRIP12Q14669 1992 aaPredicted RBP4.84□□□□□ -1.63
SDC2-208ENST00000523877 IGKV1-27A0A075B6S5 117 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 IGKV1-8A0A0C4DH67 115 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 TEX49A0A1B0GTD5 131 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 A6NN06 94 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 IGHV3-9P01782 118 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 SUPT4H1P63272 117 aaKnown RBP4.84□□□□□ -1.63
SDC2-208ENST00000523877 HOXA4Q00056 320 aaPredicted RBP4.84□□□□□ -1.63
SDC2-208ENST00000523877 PLGLAQ15195 96 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 ATP5EP2Q5VTU8 51 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 FAM223AQ8IWN6 122 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 CLECL1Q8IZS7 167 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 NRACQ8N912 160 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 CLEC2BQ92478 149 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 TIMM21Q9BVV7 248 aa4.84□□□□□ -1.63
SDC2-208ENST00000523877 GTF3C1Q12789 2109 aa4.84□□□□□ -1.64
SDC2-208ENST00000523877 DYSFO75923 2080 aa4.84□□□□□ -1.64
SDC2-208ENST00000523877 TRAV7A0A075B6U4 112 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 IGHV3OR16-13A0A075B7E8 117 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 A0A1B0GW54 56 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 C19orf84I3L1E1 186 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 WISP3O95389 354 aaPredicted RBP4.83□□□□□ -1.64
SDC2-208ENST00000523877 IFI6P09912 130 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 CRYBA2P53672 197 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 KISS1Q15726 138 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 ASB16-AS1Q495Z4 193 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 SPANXN1Q5VSR9 72 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 LYPD5Q6UWN5 251 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 VMO1Q7Z5L0 202 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 ITLN1Q8WWA0 313 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 ITLN2Q8WWU7 325 aaPredicted RBP4.83□□□□□ -1.64
SDC2-208ENST00000523877 C11orf1Q9H5F2 150 aa4.83□□□□□ -1.64
SDC2-208ENST00000523877 ATG2BQ96BY7 2078 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 BDP1A6H8Y1 2624 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 IGKV1D-17A0A075B6S4 117 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 TRGV8A0A0C4DH27 118 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 ATP6V0E1O15342 81 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 FCER1GP30273 86 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 ZNF138P52744 262 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 FGF12P61328 243 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 LPAL2Q16609 132 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 ZNF497Q6ZNH5 498 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 LINC00173Q6ZV60 143 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 C20orf197Q8N268 126 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 ZNF843Q8N446 348 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 ZNRF1Q8ND25 227 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 URB1-AS1Q96HZ7 61 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 ZNF702PQ9H963 129 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 MUC6Q6W4X9 2439 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 SHROOM3Q8TF72 1996 aa4.82□□□□□ -1.64
SDC2-208ENST00000523877 CRIP2P52943 208 aaPredicted RBP4.81□□□□□ -1.64
SDC2-208ENST00000523877 FAM72AQ5TYM5 149 aa4.81□□□□□ -1.64
SDC2-208ENST00000523877 IGFL3Q6UXB1 125 aa4.81□□□□□ -1.64
SDC2-208ENST00000523877 SOSTDC1Q6X4U4 206 aa4.81□□□□□ -1.64
SDC2-208ENST00000523877 Q6ZSV7 163 aa4.81□□□□□ -1.64
SDC2-208ENST00000523877 ZNF491Q8N8L2 437 aa4.81□□□□□ -1.64
SDC2-208ENST00000523877 EML6Q6ZMW3 1958 aa4.81□□□□□ -1.64
SDC2-208ENST00000523877 A0A087X002 238 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 LINC01548A6NM66 108 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 PIN1P1O15428 100 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 CCL5P13501 91 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 RPL38P63173 70 aaKnown RBP4.8□□□□□ -1.64
SDC2-208ENST00000523877 Q0VFX4 171 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 PATE2Q6UY27 113 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 LINC00269Q8N2A0 174 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 ZNF524Q96C55 264 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 Q96M85 177 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 TAC3Q9UHF0 121 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 DOCK11Q5JSL3 2073 aa4.8□□□□□ -1.64
SDC2-208ENST00000523877 KIAA2026Q5HYC2 2103 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 IGHV1-45A0A0A0MS14 117 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 IGLV9-49A0A0B4J1Y8 123 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 TRBV5-4A0A0C4DH59 114 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 TCRBV5S1A1TA0A578 114 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 FAM223BA6NKX1 122 aa4.79□□□□□ -1.64
SDC2-208ENST00000523877 IGKV1-16P04430 117 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms