RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 A0A1B0GVY2 172 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 A0A1W2PPQ1 181 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 GGTLC3B5MD39 225 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 M0R2P5 195 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 CIDEAO60543 219 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 IGHV3-53P01767 116 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 PPT1P50897 306 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 FHL2Q14192 279 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 ZNF726P1Q15940 193 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 ZFP69Q49AA0 526 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 SMUG1Q53HV7 270 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 TTC32Q5I0X7 151 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 KCNRGQ8N5I3 272 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 HIST1H2BAQ96A08 127 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 ICOSQ9Y6W8 199 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 MUC4Q99102 2169 aa11.95□□□□□ -0.5
CCNC-213ENST00000523541 IGHV3-16A0A0C4DH30 117 aa11.94□□□□□ -0.5
CCNC-213ENST00000523541 IGLV2-11P01706 119 aa11.94□□□□□ -0.5
CCNC-213ENST00000523541 PFN1P07737 140 aaKnown RBP11.94□□□□□ -0.5
CCNC-213ENST00000523541 CRYBA4P53673 196 aa11.94□□□□□ -0.5
CCNC-213ENST00000523541 MRPL23Q16540 153 aaKnown RBP11.94□□□□□ -0.5
CCNC-213ENST00000523541 STOML3Q8TAV4 291 aa11.94□□□□□ -0.5
CCNC-213ENST00000523541 TCEAL7Q9BRU2 100 aa11.94□□□□□ -0.5
CCNC-213ENST00000523541 NAGKQ9UJ70 344 aa11.94□□□□□ -0.5
CCNC-213ENST00000523541 UMAD1C9J7I0 102 aa11.93□□□□□ -0.5
CCNC-213ENST00000523541 GNRH2O43555 120 aa11.93□□□□□ -0.5
CCNC-213ENST00000523541 SEC11BP0C7V7 166 aa11.93□□□□□ -0.5
CCNC-213ENST00000523541 LCE2DQ5TA82 110 aaPredicted RBP11.93□□□□□ -0.5
CCNC-213ENST00000523541 C6orf223Q8N319 242 aa11.93□□□□□ -0.5
CCNC-213ENST00000523541 PTH2Q96A98 100 aa11.93□□□□□ -0.5
CCNC-213ENST00000523541 PKD1P98161 4303 aa11.93□□□□□ -0.5
CCNC-213ENST00000523541 PKHD1P08F94 4074 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 TRAV4A0A0B4J268 109 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 TRGV4A0A0C4DH28 118 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 F6UZH7 168 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 GCGP01275 180 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 IFNA7P01567 189 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 ORM1P02763 201 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 TYMSP04818 313 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 FHITP49789 147 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 EIF5AP63241 154 aaKnown RBP11.92□□□□□ -0.5
CCNC-213ENST00000523541 ARL2-SNX15V9GYD0 113 aa11.92□□□□□ -0.5
CCNC-213ENST00000523541 FAM74A7A6NL05 159 aa11.91□□□□□ -0.5
CCNC-213ENST00000523541 PRNTQ86SH4 94 aa11.91□□□□□ -0.5
CCNC-213ENST00000523541 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
CCNC-213ENST00000523541 MAP1LC3B2A6NCE7 125 aa11.9□□□□□ -0.5
CCNC-213ENST00000523541 DPPA3Q6W0C5 159 aa11.9□□□□□ -0.5
CCNC-213ENST00000523541 NEGR1Q7Z3B1 354 aa11.9□□□□□ -0.5
CCNC-213ENST00000523541 OR4C5Q8NGB2 326 aa11.9□□□□□ -0.5
CCNC-213ENST00000523541 ZNF479Q96JC4 524 aa11.9□□□□□ -0.5
CCNC-213ENST00000523541 MAP1LC3BQ9GZQ8 125 aa11.9□□□□□ -0.5
CCNC-213ENST00000523541 ZFP30Q9Y2G7 519 aa11.9□□□□□ -0.5
CCNC-213ENST00000523541 KANTRA0A1W2PQU2 76 aa11.89□□□□□ -0.51
CCNC-213ENST00000523541 FABP5P3A8MUU1 101 aa11.89□□□□□ -0.51
CCNC-213ENST00000523541 PEX7O00628 323 aa11.89□□□□□ -0.51
CCNC-213ENST00000523541 ZNF80P51504 273 aaPredicted RBP11.89□□□□□ -0.51
CCNC-213ENST00000523541 COX8CQ7Z4L0 72 aa11.89□□□□□ -0.51
CCNC-213ENST00000523541 SH2D6Q7Z4S9 175 aa11.89□□□□□ -0.51
CCNC-213ENST00000523541 C8orf49Q96NF6 230 aa11.89□□□□□ -0.51
CCNC-213ENST00000523541 C9JCJ5 164 aa11.88□□□□□ -0.51
CCNC-213ENST00000523541 SMLR1H3BR10 107 aa11.88□□□□□ -0.51
CCNC-213ENST00000523541 K7EP13 123 aa11.88□□□□□ -0.51
CCNC-213ENST00000523541 FGF8P55075 233 aaPredicted RBP11.88□□□□□ -0.51
CCNC-213ENST00000523541 UBE2G2P60604 165 aa11.88□□□□□ -0.51
CCNC-213ENST00000523541 PIK3CD-AS1Q5SR53 167 aa11.88□□□□□ -0.51
CCNC-213ENST00000523541 OR11H4Q8NGC9 324 aa11.88□□□□□ -0.51
CCNC-213ENST00000523541 PCNPQ8WW12 178 aaKnown RBP11.88□□□□□ -0.51
CCNC-213ENST00000523541 MBD3L1Q8WWY6 194 aa11.88□□□□□ -0.51
CCNC-213ENST00000523541 TRBV6-1A0A0K0K1D8 114 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 SIVA1O15304 175 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 BCL2L11O43521 198 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 TNP2Q05952 138 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 LGALSLQ3ZCW2 172 aaPredicted RBP11.87□□□□□ -0.51
CCNC-213ENST00000523541 ZNF876PQ49A33 203 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 LYPD5Q6UWN5 251 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 FMC1Q96HJ9 113 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 TXNDC17Q9BRA2 123 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 C11orf21Q9P2W6 132 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 DNAH11Q96DT5 4516 aa11.87□□□□□ -0.51
CCNC-213ENST00000523541 K7EQD1 137 aa11.86□□□□□ -0.51
CCNC-213ENST00000523541 SFTA3P0C7M3 94 aa11.86□□□□□ -0.51
CCNC-213ENST00000523541 MED14OSP0DP75 135 aa11.86□□□□□ -0.51
CCNC-213ENST00000523541 SRIP30626 198 aa11.86□□□□□ -0.51
CCNC-213ENST00000523541 C9orf85Q96MD7 179 aa11.86□□□□□ -0.51
CCNC-213ENST00000523541 ZNF471Q9BX82 626 aaPredicted RBP11.86□□□□□ -0.51
CCNC-213ENST00000523541 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
CCNC-213ENST00000523541 HERC2O95714 4834 aa11.86□□□□□ -0.51
CCNC-213ENST00000523541 TRAV34A0A0B4J273 112 aa11.85□□□□□ -0.51
CCNC-213ENST00000523541 S100A9P06702 114 aaKnown RBP11.85□□□□□ -0.51
CCNC-213ENST00000523541 ZNF575Q86XF7 245 aa11.85□□□□□ -0.51
CCNC-213ENST00000523541 SFT2D1Q8WV19 159 aa11.85□□□□□ -0.51
CCNC-213ENST00000523541 DYNC1H1Q14204 4646 aaKnown RBP11.85□□□□□ -0.51
CCNC-213ENST00000523541 TRAV9-2A0A087WT02 112 aa11.84□□□□□ -0.51
CCNC-213ENST00000523541 RS1O15537 224 aa11.84□□□□□ -0.51
CCNC-213ENST00000523541 TPT1P13693 172 aaKnown RBP11.84□□□□□ -0.51
CCNC-213ENST00000523541 GYPEP15421 78 aa11.84□□□□□ -0.51
CCNC-213ENST00000523541 GATA1P15976 413 aaPredicted RBP11.84□□□□□ -0.51
CCNC-213ENST00000523541 UBE2G1P62253 170 aa11.84□□□□□ -0.51
CCNC-213ENST00000523541 DNLZQ5SXM8 178 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms