RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 LGALS1P09382 135 aaKnown RBP6.5□□□□□ -1.37
CSMD1-213ENST00000523488 RPL27AP46776 148 aaKnown RBP6.5□□□□□ -1.37
CSMD1-213ENST00000523488 EBI3Q14213 229 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 TMEM105Q8N8V8 129 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 PRADC1Q9BSG0 188 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 MYO18BQ8IUG5 2567 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 PIEZO1Q92508 2521 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 MYO15AQ9UKN7 3530 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 C5orf47Q569G3 176 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 IGFBPL1Q8WX77 278 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 ODF3Q96PU9 254 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 SHANK2-AS3Q9BTD1 123 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 A0A1B0GX51 115 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 A0A1W2PPI3 338 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 CRLF1O75462 422 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 DLX6P56179 175 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 HERVK_113P61574 105 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 C10orf126Q8N4M7 172 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 NEXN-AS1Q8NBZ9 246 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 NRGNQ92686 78 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 CCL13Q99616 98 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 BEX4Q9NWD9 120 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-213ENST00000523488 Q6ZQT7 251 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 TPSG1Q9NRR2 321 aa6.49□□□□□ -1.37
CSMD1-213ENST00000523488 I3L2K1 104 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-213ENST00000523488 TTTY12Q9BZ98 90 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 IGLV3-9A0A075B6K5 115 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 RBAKDNA6NC62 111 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 NBR2O15453 112 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 IGHV4-39P01824 125 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 RPS28P62857 69 aaKnown RBP6.48□□□□□ -1.37
CSMD1-213ENST00000523488 SPXQ9BT56 116 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 DSCAMO60469 2012 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 IGHV3-72A0A0B4J1Y9 119 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 TEX22C9J3V5 150 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 EGR2P11161 476 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-213ENST00000523488 ZNF56Q15929 161 aa6.48□□□□□ -1.37
CSMD1-213ENST00000523488 PTPRQQ9UMZ3 2332 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 IGKV2-40A0A087WW87 121 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-213ENST00000523488 A0A0J9YX75 114 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 GAS8-AS1O95177 125 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 IGKV2D-40P01614 121 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-213ENST00000523488 PF4V1P10720 104 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 HIST1H4AP62805 103 aaKnown RBP6.47□□□□□ -1.37
CSMD1-213ENST00000523488 FOXC1Q12948 553 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 C9orf153Q5TBE3 101 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 ZNF474Q6S9Z5 364 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-213ENST00000523488 NDUFA11Q86Y39 141 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 Q8N1Y9 231 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 MDS2Q8NDY4 140 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 FAM57AQ8TBR7 257 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 TOMM6Q96B49 74 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 IMUPQ9GZP8 106 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 PRO1854Q9UHT4 67 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 CD59P13987 128 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 IGHV1-2P23083 117 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 Q8TAT8 98 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 FRYLO94915 3013 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 DTX2Q86UW9 622 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 GAFA1Q96PS6 74 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 CHCHD5Q9BSY4 110 aa6.47□□□□□ -1.37
CSMD1-213ENST00000523488 CSPG4Q6UVK1 2322 aa6.46□□□□□ -1.37
CSMD1-213ENST00000523488 FAM216BQ8N7L0 139 aa6.46□□□□□ -1.37
CSMD1-213ENST00000523488 GLRXP35754 106 aa6.46□□□□□ -1.38
CSMD1-213ENST00000523488 TRPT1Q86TN4 253 aaKnown RBP6.46□□□□□ -1.38
CSMD1-213ENST00000523488 KLHL30-AS1Q8NEE0 82 aa6.46□□□□□ -1.38
CSMD1-213ENST00000523488 RNF7Q9UBF6 113 aa6.46□□□□□ -1.38
CSMD1-213ENST00000523488 ANKRD11Q6UB99 2663 aaPredicted RBP6.46□□□□□ -1.38
CSMD1-213ENST00000523488 HLA-DMBP28068 263 aa6.46□□□□□ -1.38
CSMD1-213ENST00000523488 SPANXN1Q5VSR9 72 aa6.46□□□□□ -1.38
CSMD1-213ENST00000523488 DUX4L9Q6RFH8 374 aaPredicted RBP6.46□□□□□ -1.38
CSMD1-213ENST00000523488 PLEKHB2Q96CS7 222 aa6.46□□□□□ -1.38
CSMD1-213ENST00000523488 A0A0B4J2C4 111 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 H3BMM0 161 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 IGHV3-30P01768 117 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 CECR9P0C854 216 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 IGHV3-30-5P0DP03 117 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 ERCC8Q13216 396 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 UBE2WQ96B02 151 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 TIMD4Q96H15 378 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 PRR25Q96S07 402 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 SIGLEC9Q9Y336 463 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 ATXN8Q156A1 80 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 AGPAT4-IT1Q9H0P7 198 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 TRGV5A0A0B4J1U4 118 aa6.45□□□□□ -1.38
CSMD1-213ENST00000523488 ZNF256Q9Y2P7 627 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-213ENST00000523488 CSDC2Q9Y534 153 aaKnown RBP6.45□□□□□ -1.38
CSMD1-213ENST00000523488 TRAV26-2A0A0B4J265 109 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 DLX1P56177 255 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 ORMDL2Q53FV1 153 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 C2orf82Q6UX34 121 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 Q6ZT83 130 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 RNF125Q96EQ8 232 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 DNAJC30Q96LL9 226 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 PTPN13Q12923 2485 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 TEX49A0A1B0GTD5 131 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 M0R381 172 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 NXPH4O95158 308 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 LINC00694P0DN24 101 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms