RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 C16orf54Q6UWD8 224 aa7.02□□□□□ -1.29
CSMD1-212ENST00000523387 PIP4P2Q8N4L2 257 aa7.02□□□□□ -1.29
CSMD1-212ENST00000523387 E7EQL1 145 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 IGLV1-47P01700 117 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 NBEAQ8NFP9 2946 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 TTC28Q96AY4 2481 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 COL6A6A6NMZ7 2263 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 ANKHD1Q8IWZ3 2542 aaKnown RBP7.01□□□□□ -1.29
CSMD1-212ENST00000523387 LGALS1P09382 135 aaKnown RBP7.01□□□□□ -1.29
CSMD1-212ENST00000523387 ZNF56Q15929 161 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 TEN1Q86WV5 123 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 RNF183Q96D59 192 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 VPS13AQ96RL7 3174 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 HOXB4P17483 251 aaPredicted RBP7.01□□□□□ -1.29
CSMD1-212ENST00000523387 ZNF672Q499Z4 452 aaPredicted RBP7.01□□□□□ -1.29
CSMD1-212ENST00000523387 ZFP2Q6ZN57 461 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 Q6ZUT4 128 aa7.01□□□□□ -1.29
CSMD1-212ENST00000523387 NOTCH3Q9UM47 2321 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 FAM159AQ6UWV7 190 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 TP53TG1Q9Y2A0 90 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 PTPRBP23467 1997 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 CRYGBP07316 175 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 PIFOQ8TCI5 191 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 IGLV11-55A0A075B6I3 123 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 SLC25A20O43772 301 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 GAGE5Q13069 117 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 GAGE6Q13070 117 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 RPL39LQ96EH5 51 aaKnown RBP7□□□□□ -1.29
CSMD1-212ENST00000523387 PRO1854Q9UHT4 67 aa7□□□□□ -1.29
CSMD1-212ENST00000523387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7□□□□□ -1.29
CSMD1-212ENST00000523387 HTN1P15515 57 aa6.99□□□□□ -1.29
CSMD1-212ENST00000523387 VMO1Q7Z5L0 202 aa6.99□□□□□ -1.29
CSMD1-212ENST00000523387 CELSR3Q9NYQ7 3312 aa6.99□□□□□ -1.29
CSMD1-212ENST00000523387 CTSGP08311 255 aa6.99□□□□□ -1.29
CSMD1-212ENST00000523387 FANCD2OSQ96PS1 177 aa6.99□□□□□ -1.29
CSMD1-212ENST00000523387 LINC00527Q9UJ94 153 aa6.99□□□□□ -1.29
CSMD1-212ENST00000523387 PIEZO2Q9H5I5 2752 aa6.99□□□□□ -1.29
CSMD1-212ENST00000523387 IGKV3D-20A0A0C4DH25 116 aa6.98□□□□□ -1.29
CSMD1-212ENST00000523387 TSPAN13O95857 204 aa6.98□□□□□ -1.29
CSMD1-212ENST00000523387 ANKRD29Q8N6D5 301 aa6.98□□□□□ -1.29
CSMD1-212ENST00000523387 ATP6V0E2Q8NHE4 81 aa6.98□□□□□ -1.29
CSMD1-212ENST00000523387 TRAV12-1A0A0B4J245 112 aa6.98□□□□□ -1.29
CSMD1-212ENST00000523387 IGKV3-20P01619 116 aa6.98□□□□□ -1.29
CSMD1-212ENST00000523387 NTN5Q8WTR8 489 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-212ENST00000523387 Q6ZS92 163 aa6.98□□□□□ -1.29
CSMD1-212ENST00000523387 PHLDA1Q8WV24 401 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-212ENST00000523387 DOPEY2Q9Y3R5 2298 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 A0A087WWL8 130 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 PMVKQ15126 192 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 IGFL2Q6UWQ7 119 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 ZMAT4Q9H898 229 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 TECTAO75443 2155 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 DUSP14O95147 198 aaKnown RBP6.97□□□□□ -1.29
CSMD1-212ENST00000523387 CD7P09564 240 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 XGP55808 180 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 TCF15Q12870 199 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 BAALCQ8WXS3 180 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 PLEKHB2Q96CS7 222 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 UBTD1Q9HAC8 227 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 REV3LO60673 3130 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 TRBV7-3A0A075B6L6 115 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 PAX8Q06710 450 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 ATXN8Q156A1 80 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 C2orf82Q6UX34 121 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 C9orf139Q6ZV77 190 aa6.97□□□□□ -1.29
CSMD1-212ENST00000523387 G3V318 75 aa6.96□□□□□ -1.29
CSMD1-212ENST00000523387 VCYO14598 125 aa6.96□□□□□ -1.29
CSMD1-212ENST00000523387 IGHV3-11P01762 117 aa6.96□□□□□ -1.29
CSMD1-212ENST00000523387 PF4V1P10720 104 aa6.96□□□□□ -1.29
CSMD1-212ENST00000523387 CFAP126Q5VTH2 177 aa6.96□□□□□ -1.29
CSMD1-212ENST00000523387 FRYQ5TBA9 3013 aa6.96□□□□□ -1.29
CSMD1-212ENST00000523387 ARHGAP32A7KAX9 2087 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 GAGE12JA6NER3 117 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 GAGE7O76087 117 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 TCL1BO95988 128 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 GAGE12FP0CL80 117 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 GAGE12GP0CL81 117 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 GAGE12IP0CL82 117 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 GAGE4Q13068 117 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 MRGPRG-AS1Q2M3A8 158 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 LINC00477Q96M19 166 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 COLQQ9Y215 455 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-212ENST00000523387 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-212ENST00000523387 J3QQQ9 107 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 MRPS12O15235 138 aaKnown RBP6.96□□□□□ -1.3
CSMD1-212ENST00000523387 ATP6V0E1O15342 81 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 BUB3O43684 328 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 THBDP07204 575 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 C10orf126Q8N4M7 172 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 TOMM6Q96B49 74 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 FRYLO94915 3013 aa6.96□□□□□ -1.3
CSMD1-212ENST00000523387 IGHV3OR16-10A0A075B7F0 116 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 OVOL1O14753 267 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 IFITM1P13164 125 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 SRD5A1P18405 259 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 NPC2P61916 151 aa6.95□□□□□ -1.3
CSMD1-212ENST00000523387 SRSF2Q01130 221 aaKnown RBP6.95□□□□□ -1.3
CSMD1-212ENST00000523387 C11orf86A6NJI1 115 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms