RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 PLAC8Q9NZF1 115 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 Q9UF83 564 aa8.68□□□□□ -1.02
NKX3-1-202ENST00000523261 SSSCA1O60232 199 aa8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 CAMLGP49069 296 aa8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 CAV2P51636 162 aa8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 MRPS10P82664 201 aaKnown RBP8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 TMEM128Q5BJH2 165 aa8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 ENHOQ6UWT2 76 aa8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 C12orf45Q8N5I9 185 aaPredicted RBP8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 PFDN5Q99471 154 aa8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 CHCHD7Q9BUK0 85 aa8.67□□□□□ -1.02
NKX3-1-202ENST00000523261 A0A087WX48 190 aa8.66□□□□□ -1.02
NKX3-1-202ENST00000523261 HLA-DQA1P01909 254 aa8.66□□□□□ -1.02
NKX3-1-202ENST00000523261 VAMP1P23763 118 aa8.66□□□□□ -1.02
NKX3-1-202ENST00000523261 GGACTQ9BVM4 153 aa8.66□□□□□ -1.02
NKX3-1-202ENST00000523261 ANKRD20A5PA0PJZ0 165 aa8.65□□□□□ -1.02
NKX3-1-202ENST00000523261 VBP1P61758 197 aa8.65□□□□□ -1.02
NKX3-1-202ENST00000523261 NRARPQ7Z6K4 114 aa8.65□□□□□ -1.02
NKX3-1-202ENST00000523261 ATP5SQ99766 215 aa8.65□□□□□ -1.02
NKX3-1-202ENST00000523261 GPN1Q9HCN4 374 aaPredicted RBP8.65□□□□□ -1.02
NKX3-1-202ENST00000523261 SLC39A9Q9NUM3 307 aa8.65□□□□□ -1.02
NKX3-1-202ENST00000523261 LENEPQ9Y5L5 61 aa8.65□□□□□ -1.02
NKX3-1-202ENST00000523261 RBAKDNA6NC62 111 aa8.64□□□□□ -1.03
NKX3-1-202ENST00000523261 CTDSPLO15194 276 aa8.64□□□□□ -1.03
NKX3-1-202ENST00000523261 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
NKX3-1-202ENST00000523261 SAMD10Q9BYL1 202 aa8.64□□□□□ -1.03
NKX3-1-202ENST00000523261 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
NKX3-1-202ENST00000523261 VAX2Q9UIW0 290 aa8.64□□□□□ -1.03
NKX3-1-202ENST00000523261 PGPA6NDG6 321 aa8.63□□□□□ -1.03
NKX3-1-202ENST00000523261 DIRC3C9JPN6 131 aa8.63□□□□□ -1.03
NKX3-1-202ENST00000523261 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
NKX3-1-202ENST00000523261 DMRTA1Q5VZB9 504 aa8.63□□□□□ -1.03
NKX3-1-202ENST00000523261 GTSF1Q8WW33 167 aa8.63□□□□□ -1.03
NKX3-1-202ENST00000523261 MIXL1Q9H2W2 232 aa8.63□□□□□ -1.03
NKX3-1-202ENST00000523261 SDF2L1Q9HCN8 221 aa8.63□□□□□ -1.03
NKX3-1-202ENST00000523261 IGHV3-64A0A075B6Q5 118 aa8.62□□□□□ -1.03
NKX3-1-202ENST00000523261 TSC22D2O75157 780 aa8.62□□□□□ -1.03
NKX3-1-202ENST00000523261 ZNF506Q5JVG8 444 aa8.62□□□□□ -1.03
NKX3-1-202ENST00000523261 AP3S1Q92572 193 aa8.62□□□□□ -1.03
NKX3-1-202ENST00000523261 C20orf85Q9H1P6 137 aa8.62□□□□□ -1.03
NKX3-1-202ENST00000523261 FSIP2Q5CZC0 6907 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 TRAV21A0A0B4J279 112 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 PGPEP1LA6NFU8 196 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 SFT2D2O95562 160 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 CRPP02741 224 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 NBEAP1P0C6P0 100 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 PPP1R1AQ13522 171 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 KCNIP4Q6PIL6 250 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 DYNC2LI1Q8TCX1 351 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 KCNS1Q96KK3 526 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 LINC00479Q96M42 142 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 SLC25A2Q9BXI2 301 aa8.61□□□□□ -1.03
NKX3-1-202ENST00000523261 TAAR5O14804 337 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 RPL29P47914 159 aaKnown RBP8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 FGF8P55075 233 aaPredicted RBP8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 TAS2R30P59541 319 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 C15orf54Q8N8G6 183 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 OR2T35Q8NGX2 323 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 ASB13Q8WXK3 278 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 PTH2Q96A98 100 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 PHYHIPLQ96FC7 376 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 FAM167A-AS1Q96KT0 104 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 C9orf85Q96MD7 179 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 PARLQ9H300 379 aa8.6□□□□□ -1.03
NKX3-1-202ENST00000523261 CSN1S1P47710 185 aa8.59□□□□□ -1.03
NKX3-1-202ENST00000523261 C14orf178Q8N769 122 aaPredicted RBP8.59□□□□□ -1.03
NKX3-1-202ENST00000523261 CLRN3Q8NCR9 226 aa8.59□□□□□ -1.03
NKX3-1-202ENST00000523261 WDR83OSQ9Y284 106 aa8.59□□□□□ -1.03
NKX3-1-202ENST00000523261 H7C1H1 209 aa8.58□□□□□ -1.04
NKX3-1-202ENST00000523261 SLPIP03973 132 aa8.58□□□□□ -1.04
NKX3-1-202ENST00000523261 MIAQ16674 131 aa8.58□□□□□ -1.04
NKX3-1-202ENST00000523261 TMED6Q8WW62 240 aa8.58□□□□□ -1.04
NKX3-1-202ENST00000523261 FUNDC2Q9BWH2 189 aa8.58□□□□□ -1.04
NKX3-1-202ENST00000523261 MUC21A0A0G2JKD1 596 aa8.57□□□□□ -1.04
NKX3-1-202ENST00000523261 F6UZH7 168 aa8.57□□□□□ -1.04
NKX3-1-202ENST00000523261 SMIM18P0DKX4 95 aa8.57□□□□□ -1.04
NKX3-1-202ENST00000523261 GCSAMLQ5JQS6 135 aa8.57□□□□□ -1.04
NKX3-1-202ENST00000523261 OR10G7Q8NGN6 311 aa8.57□□□□□ -1.04
NKX3-1-202ENST00000523261 FXYD5Q96DB9 178 aa8.57□□□□□ -1.04
NKX3-1-202ENST00000523261 Q9H521 79 aa8.57□□□□□ -1.04
NKX3-1-202ENST00000523261 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 C7orf66A4D0T2 115 aa8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 FAM231BA6NCW3 169 aa8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 SCGB1D2O95969 90 aa8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 IL18Q14116 193 aa8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 MPV17L2Q567V2 206 aa8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 UFSP1Q6NVU6 142 aa8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 TVP23CQ96ET8 276 aa8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 C11orf21Q9P2W6 132 aa8.56□□□□□ -1.04
NKX3-1-202ENST00000523261 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 A8MWV9 139 aa8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 TMEM262E9PQX1 116 aa8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 CTDSP2O14595 271 aa8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 RGS5O15539 181 aa8.55□□□□□ -1.04
NKX3-1-202ENST00000523261 TCRBP04435 133 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms