RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 CELSR1Q9NYQ6 3014 aa5.15□□□□□ -1.59
CSMD1-211ENST00000523062 TRAV2A0A0B4J234 112 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 TRAV21A0A0B4J279 112 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 A0A1B0GUS0 222 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 LY6G6DO95868 133 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 ZNF688P0C7X2 276 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 ZNF705DP0CH99 300 aaPredicted RBP5.14□□□□□ -1.59
CSMD1-211ENST00000523062 ZNF705BP0CI00 300 aaPredicted RBP5.14□□□□□ -1.59
CSMD1-211ENST00000523062 PAFAH1B2P68402 229 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 APRG1Q8IVJ8 170 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 TMEM256Q8N2U0 113 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 ZFAND2AQ8N6M9 145 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 OR9G4Q8NGQ1 327 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 DYNLRB2Q8TF09 96 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 KCNS1Q96KK3 526 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 FAM19A4Q96LR4 140 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 ODF3Q96PU9 254 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 ALKBH7Q9BT30 221 aaPredicted RBP5.14□□□□□ -1.59
CSMD1-211ENST00000523062 CNFNQ9BYD5 112 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 AP5S1Q9NUS5 200 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 TP53TG3Q9ULZ0 132 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 SELENOKQ9Y6D0 94 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 TEX15Q9BXT5 2789 aa5.14□□□□□ -1.59
CSMD1-211ENST00000523062 CSMD2Q7Z408 3487 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 LOC102724200A0A096LPH7 203 aaPredicted RBP5.13□□□□□ -1.59
CSMD1-211ENST00000523062 F2Z2F3 143 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 F6UB75 175 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 DUSP14O95147 198 aaKnown RBP5.13□□□□□ -1.59
CSMD1-211ENST00000523062 LEPP41159 167 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 TFPI2P48307 235 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 FHL3Q13643 280 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 PSMG4Q5JS54 123 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 DNLZQ5SXM8 178 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 PRR9Q5T870 116 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 EBLN2Q6P2I7 272 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 ZNF493Q6ZR52 646 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 LINC01006Q8NI28 216 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 C18orf32Q8TCD1 76 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 SMR3AQ99954 134 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 TSSC4Q9Y5U2 329 aaPredicted RBP5.13□□□□□ -1.59
CSMD1-211ENST00000523062 ACANP16112 2415 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 HIVEP2P31629 2446 aa5.13□□□□□ -1.59
CSMD1-211ENST00000523062 MYO9AB2RTY4 2548 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 IGKV3D-20A0A0C4DH25 116 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 A0A0J9YX75 114 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 A0A1W2PRX2 142 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 PF4P02776 101 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 GPX1P07203 203 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 CSN3P07498 182 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 CD28P10747 220 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 DEFB1P60022 68 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 CACNG7P62955 275 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 TWIST1Q15672 202 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 IQCJQ1A5X6 159 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 PYY3Q5JQD4 70 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 ADAMTSL5Q6ZMM2 481 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 FOXI2Q6ZQN5 318 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 DLX4Q92988 240 aaPredicted RBP5.12□□□□□ -1.59
CSMD1-211ENST00000523062 RAX2Q96IS3 184 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 DUX3Q96PT4 197 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 SAMD10Q9BYL1 202 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 NAGKQ9UJ70 344 aa5.12□□□□□ -1.59
CSMD1-211ENST00000523062 ITPR2Q14571 2701 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 TRAV25A0A0B4J276 109 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 KLLNB2CW77 178 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 J3KRW8 73 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 CCL24O00175 119 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 SNAI2O43623 268 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 NUPR1O60356 82 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 ZNF324O75467 553 aaPredicted RBP5.11□□□□□ -1.59
CSMD1-211ENST00000523062 OR5AL1P0C617 328 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 TSPOP30536 169 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 RNASE4P34096 147 aaKnown RBP5.11□□□□□ -1.59
CSMD1-211ENST00000523062 ASIPP42127 132 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 AMTP48728 403 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 JOSD1Q15040 202 aaPredicted RBP5.11□□□□□ -1.59
CSMD1-211ENST00000523062 FAM104BQ5XKR9 115 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 TMEM61Q8N0U2 210 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 RCHY1Q96PM5 261 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 CITED2Q99967 270 aaPredicted RBP5.11□□□□□ -1.59
CSMD1-211ENST00000523062 TMEM191AQ9H0A3 160 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 NIT2Q9NQR4 276 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 CSMD1Q96PZ7 3565 aa5.11□□□□□ -1.59
CSMD1-211ENST00000523062 AKAP9Q99996 3911 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 IGHV4-4A0A075B6R2 117 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 MUC21A0A0G2JKD1 596 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 MUC21A0A140T8X8 626 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 C7orf71A4D174 169 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 OR4C46A6NHA9 309 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 INAFM1C9JVW0 142 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 TCF21O43680 179 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 HSBP1O75506 76 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 PMCHP20382 165 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 NTF3P20783 257 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 S100A4P26447 101 aaKnown RBP5.1□□□□□ -1.59
CSMD1-211ENST00000523062 PROK1P58294 105 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 NOTCH2Q04721 2471 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 DEFB114Q30KQ6 69 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 PRR31Q5SQ13 230 aa5.1□□□□□ -1.59
CSMD1-211ENST00000523062 MUC21Q5SSG8 566 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms