RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 OR11H2Q8NH07 326 aa8.61□□□□□ -1.03
PVT1-215ENST00000522963 PYGO2Q9BRQ0 406 aa8.61□□□□□ -1.03
PVT1-215ENST00000522963 LINC00467Q9BRT7 94 aa8.61□□□□□ -1.03
PVT1-215ENST00000522963 NAGKQ9UJ70 344 aa8.61□□□□□ -1.03
PVT1-215ENST00000522963 IGKV3D-20A0A0C4DH25 116 aa8.6□□□□□ -1.03
PVT1-215ENST00000522963 HTN1P15515 57 aa8.6□□□□□ -1.03
PVT1-215ENST00000522963 AZU1P20160 251 aa8.6□□□□□ -1.03
PVT1-215ENST00000522963 ADIRFQ15847 76 aa8.6□□□□□ -1.03
PVT1-215ENST00000522963 NEU1Q99519 415 aa8.6□□□□□ -1.03
PVT1-215ENST00000522963 SEC11CQ9BY50 192 aa8.6□□□□□ -1.03
PVT1-215ENST00000522963 BIN3Q9NQY0 253 aa8.6□□□□□ -1.03
PVT1-215ENST00000522963 TP53TG3Q9ULZ0 132 aa8.6□□□□□ -1.03
PVT1-215ENST00000522963 KRBOX1C9JBD0 128 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 C3orf84H3BNL1 204 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 M0R036 132 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 DEFB4AO15263 64 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 ORM1P02763 201 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 TDRG1Q3Y452 100 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 LINC01559Q495D7 138 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 C10orf91Q5T1B1 145 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 FAM159AQ6UWV7 190 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 NUDT10Q8NFP7 164 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 ISOC2Q96AB3 205 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 DAZAP1Q96EP5 407 aaKnown RBP8.59□□□□□ -1.03
PVT1-215ENST00000522963 NUDT11Q96G61 164 aa8.59□□□□□ -1.03
PVT1-215ENST00000522963 RNASE7Q9H1E1 156 aaKnown RBP8.59□□□□□ -1.03
PVT1-215ENST00000522963 TMSB15BA0A087X1C1 80 aa8.58□□□□□ -1.04
PVT1-215ENST00000522963 GNRH2O43555 120 aa8.58□□□□□ -1.04
PVT1-215ENST00000522963 RPL19P84098 196 aaKnown RBP8.58□□□□□ -1.04
PVT1-215ENST00000522963 RRN3P1Q2M238 152 aa8.58□□□□□ -1.04
PVT1-215ENST00000522963 FAM231DQ6ZW35 169 aa8.58□□□□□ -1.04
PVT1-215ENST00000522963 ZNF575Q86XF7 245 aa8.58□□□□□ -1.04
PVT1-215ENST00000522963 Q8NAQ8 132 aa8.58□□□□□ -1.04
PVT1-215ENST00000522963 CARHSP1Q9Y2V2 147 aaKnown RBP8.58□□□□□ -1.04
PVT1-215ENST00000522963 IGHV4-28A0A0C4DH34 117 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 TMEM189A5PLL7 270 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 SMIM9A6NGZ8 99 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 CBY3A6NI87 242 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 B4DEV8 164 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 P01737 135 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 TYMSP04818 313 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 MIFP14174 115 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 ERVFC1-1P60608 527 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 IBA57Q5T440 356 aaKnown RBP8.57□□□□□ -1.04
PVT1-215ENST00000522963 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 RNASE8Q8TDE3 154 aaKnown RBP8.57□□□□□ -1.04
PVT1-215ENST00000522963 KCNS1Q96KK3 526 aa8.57□□□□□ -1.04
PVT1-215ENST00000522963 TRGV11A0A075B6L2 103 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 IGHV3-16A0A0C4DH30 117 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 PLAC8L1A1L4L8 177 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 GRIFINA4D1Z8 144 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
PVT1-215ENST00000522963 PNRC1Q12796 327 aaPredicted RBP8.56□□□□□ -1.04
PVT1-215ENST00000522963 CASC10Q5T4H9 136 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 C11orf72Q8NBR9 251 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 IL17DQ8TAD2 202 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 TMEM263Q8WUH6 116 aaKnown RBP8.56□□□□□ -1.04
PVT1-215ENST00000522963 C16orf74Q96GX8 76 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 SFRP2Q96HF1 295 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 RPP21Q9H633 154 aaKnown RBP8.56□□□□□ -1.04
PVT1-215ENST00000522963 OSTCQ9NRP0 149 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 MDFICQ9P1T7 246 aa8.56□□□□□ -1.04
PVT1-215ENST00000522963 CXorf65A6NEN9 183 aa8.55□□□□□ -1.04
PVT1-215ENST00000522963 ZNF493Q6ZR52 646 aa8.55□□□□□ -1.04
PVT1-215ENST00000522963 OR10G8Q8NGN5 311 aa8.55□□□□□ -1.04
PVT1-215ENST00000522963 GSN-AS1Q9NRJ2 163 aa8.55□□□□□ -1.04
PVT1-215ENST00000522963 GZMBP10144 247 aa8.54□□□□□ -1.04
PVT1-215ENST00000522963 RNASE3P12724 160 aaKnown RBP8.54□□□□□ -1.04
PVT1-215ENST00000522963 ASIPP42127 132 aa8.54□□□□□ -1.04
PVT1-215ENST00000522963 EMP1P54849 157 aa8.54□□□□□ -1.04
PVT1-215ENST00000522963 TCL1AP56279 114 aa8.54□□□□□ -1.04
PVT1-215ENST00000522963 DNLZQ5SXM8 178 aa8.54□□□□□ -1.04
PVT1-215ENST00000522963 C15orf54Q8N8G6 183 aa8.54□□□□□ -1.04
PVT1-215ENST00000522963 V9GYV3 84 aa8.54□□□□□ -1.04
PVT1-215ENST00000522963 APOC3P02656 99 aa8.53□□□□□ -1.04
PVT1-215ENST00000522963 CXCL1P09341 107 aa8.53□□□□□ -1.04
PVT1-215ENST00000522963 S100A4P26447 101 aaKnown RBP8.53□□□□□ -1.04
PVT1-215ENST00000522963 RPS20P60866 119 aaKnown RBP8.53□□□□□ -1.04
PVT1-215ENST00000522963 ZNF415Q09FC8 603 aa8.53□□□□□ -1.04
PVT1-215ENST00000522963 RNF212Q495C1 297 aa8.53□□□□□ -1.04
PVT1-215ENST00000522963 C11orf68Q9H3H3 251 aaKnown RBP8.53□□□□□ -1.04
PVT1-215ENST00000522963 TIMM8BQ9Y5J9 83 aaPredicted RBP8.53□□□□□ -1.04
PVT1-215ENST00000522963 XKRY2A2RUG3 117 aa8.52□□□□□ -1.05
PVT1-215ENST00000522963 SNURFLB1AK76 121 aa8.52□□□□□ -1.05
PVT1-215ENST00000522963 H3BVH4 76 aa8.52□□□□□ -1.05
PVT1-215ENST00000522963 ARMS2P0C7Q2 107 aa8.52□□□□□ -1.05
PVT1-215ENST00000522963 NANOS2P60321 138 aaKnown RBP8.52□□□□□ -1.05
PVT1-215ENST00000522963 CT83Q5H943 113 aa8.52□□□□□ -1.05
PVT1-215ENST00000522963 CLRN3Q8NCR9 226 aa8.52□□□□□ -1.05
PVT1-215ENST00000522963 C11orf45Q8TAV5 145 aa8.52□□□□□ -1.05
PVT1-215ENST00000522963 C9orf85Q96MD7 179 aa8.52□□□□□ -1.05
PVT1-215ENST00000522963 NOP10Q9NPE3 64 aaKnown RBP8.52□□□□□ -1.05
PVT1-215ENST00000522963 A8MWL6 223 aa8.51□□□□□ -1.05
PVT1-215ENST00000522963 IGLC6P0CF74 106 aa8.51□□□□□ -1.05
PVT1-215ENST00000522963 DAZ2Q13117 558 aaKnown RBP8.51□□□□□ -1.05
PVT1-215ENST00000522963 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
PVT1-215ENST00000522963 GTSF1Q8WW33 167 aa8.51□□□□□ -1.05
PVT1-215ENST00000522963 SCRT2Q9NQ03 307 aa8.51□□□□□ -1.05
PVT1-215ENST00000522963 IL36BQ9NZH7 164 aa8.51□□□□□ -1.05
PVT1-215ENST00000522963 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms