RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 RPL23P62829 140 aaKnown RBP17.42■□□□□ 0.38
PVT1-212ENST00000521951 IGKV3D-20A0A0C4DH25 116 aa17.41■□□□□ 0.38
PVT1-212ENST00000521951 C19orf71A6NCJ1 209 aa17.41■□□□□ 0.38
PVT1-212ENST00000521951 SLC7A5P1Q8MH63 180 aa17.41■□□□□ 0.38
PVT1-212ENST00000521951 Q8NAQ8 132 aa17.41■□□□□ 0.38
PVT1-212ENST00000521951 DAZAP1Q96EP5 407 aaKnown RBP17.41■□□□□ 0.38
PVT1-212ENST00000521951 KCNS1Q96KK3 526 aa17.41■□□□□ 0.38
PVT1-212ENST00000521951 COL7A1Q02388 2944 aa17.4■□□□□ 0.38
PVT1-212ENST00000521951 IGHV4-28A0A0C4DH34 117 aa17.4■□□□□ 0.38
PVT1-212ENST00000521951 M0R036 132 aa17.4■□□□□ 0.38
PVT1-212ENST00000521951 ADCYAP1P18509 176 aa17.4■□□□□ 0.38
PVT1-212ENST00000521951 F8W036 122 aa17.39■□□□□ 0.37
PVT1-212ENST00000521951 GNRH2O43555 120 aa17.39■□□□□ 0.37
PVT1-212ENST00000521951 LINC01559Q495D7 138 aa17.39■□□□□ 0.37
PVT1-212ENST00000521951 B4DEV8 164 aa17.38■□□□□ 0.37
PVT1-212ENST00000521951 KRBOX1C9JBD0 128 aa17.38■□□□□ 0.37
PVT1-212ENST00000521951 TYMSP04818 313 aa17.38■□□□□ 0.37
PVT1-212ENST00000521951 ADIRFQ15847 76 aa17.38■□□□□ 0.37
PVT1-212ENST00000521951 NUDT10Q8NFP7 164 aa17.38■□□□□ 0.37
PVT1-212ENST00000521951 RNASE8Q8TDE3 154 aaKnown RBP17.38■□□□□ 0.37
PVT1-212ENST00000521951 TMEM263Q8WUH6 116 aaKnown RBP17.38■□□□□ 0.37
PVT1-212ENST00000521951 NUDT11Q96G61 164 aa17.38■□□□□ 0.37
PVT1-212ENST00000521951 RNASE7Q9H1E1 156 aaKnown RBP17.38■□□□□ 0.37
PVT1-212ENST00000521951 DEFB4AO15263 64 aa17.37■□□□□ 0.37
PVT1-212ENST00000521951 NDUFA5Q16718 116 aa17.37■□□□□ 0.37
PVT1-212ENST00000521951 ZNF493Q6ZR52 646 aa17.37■□□□□ 0.37
PVT1-212ENST00000521951 C16orf74Q96GX8 76 aa17.37■□□□□ 0.37
PVT1-212ENST00000521951 SEC11CQ9BY50 192 aa17.37■□□□□ 0.37
PVT1-212ENST00000521951 P01737 135 aa17.37■□□□□ 0.37
PVT1-212ENST00000521951 RPL19P84098 196 aaKnown RBP17.37■□□□□ 0.37
PVT1-212ENST00000521951 ZNF575Q86XF7 245 aa17.37■□□□□ 0.37
PVT1-212ENST00000521951 ISOC2Q96AB3 205 aa17.37■□□□□ 0.37
PVT1-212ENST00000521951 TRGV11A0A075B6L2 103 aa17.36■□□□□ 0.37
PVT1-212ENST00000521951 TMSB15BA0A087X1C1 80 aa17.36■□□□□ 0.37
PVT1-212ENST00000521951 TMEM189A5PLL7 270 aa17.36■□□□□ 0.37
PVT1-212ENST00000521951 IBA57Q5T440 356 aaKnown RBP17.36■□□□□ 0.37
PVT1-212ENST00000521951 FAM231DQ6ZW35 169 aa17.36■□□□□ 0.37
PVT1-212ENST00000521951 PLAC8L1A1L4L8 177 aa17.35■□□□□ 0.37
PVT1-212ENST00000521951 C11orf72Q8NBR9 251 aa17.35■□□□□ 0.37
PVT1-212ENST00000521951 MDFICQ9P1T7 246 aa17.35■□□□□ 0.37
PVT1-212ENST00000521951 IGHV3-16A0A0C4DH30 117 aa17.34■□□□□ 0.37
PVT1-212ENST00000521951 EMP1P54849 157 aa17.34■□□□□ 0.37
PVT1-212ENST00000521951 ERVFC1-1P60608 527 aa17.34■□□□□ 0.37
PVT1-212ENST00000521951 C10orf91Q5T1B1 145 aa17.34■□□□□ 0.37
PVT1-212ENST00000521951 OR2D3Q8NGH3 330 aa17.34■□□□□ 0.37
PVT1-212ENST00000521951 GSN-AS1Q9NRJ2 163 aa17.34■□□□□ 0.37
PVT1-212ENST00000521951 GRIFINA4D1Z8 144 aa17.33■□□□□ 0.37
PVT1-212ENST00000521951 C11orf68Q9H3H3 251 aaKnown RBP17.33■□□□□ 0.37
PVT1-212ENST00000521951 U3KQK5 164 aa17.33■□□□□ 0.37
PVT1-212ENST00000521951 A0A0J9YWU9 116 aa17.32■□□□□ 0.36
PVT1-212ENST00000521951 ZNF415Q09FC8 603 aa17.32■□□□□ 0.36
PVT1-212ENST00000521951 PNRC1Q12796 327 aaPredicted RBP17.32■□□□□ 0.36
PVT1-212ENST00000521951 OSTCQ9NRP0 149 aa17.32■□□□□ 0.36
PVT1-212ENST00000521951 GATCO43716 136 aaKnown RBP17.31■□□□□ 0.36
PVT1-212ENST00000521951 SFRP2Q96HF1 295 aa17.31■□□□□ 0.36
PVT1-212ENST00000521951 RPP21Q9H633 154 aaKnown RBP17.31■□□□□ 0.36
PVT1-212ENST00000521951 SNURFLB1AK76 121 aa17.31■□□□□ 0.36
PVT1-212ENST00000521951 ASIPP42127 132 aa17.31■□□□□ 0.36
PVT1-212ENST00000521951 TCL1AP56279 114 aa17.31■□□□□ 0.36
PVT1-212ENST00000521951 DNLZQ5SXM8 178 aa17.31■□□□□ 0.36
PVT1-212ENST00000521951 CXCL1P09341 107 aa17.3■□□□□ 0.36
PVT1-212ENST00000521951 RNASE3P12724 160 aaKnown RBP17.3■□□□□ 0.36
PVT1-212ENST00000521951 IL17DQ8TAD2 202 aa17.3■□□□□ 0.36
PVT1-212ENST00000521951 CARHSP1Q9Y2V2 147 aaKnown RBP17.3■□□□□ 0.36
PVT1-212ENST00000521951 TIMM8BQ9Y5J9 83 aaPredicted RBP17.3■□□□□ 0.36
PVT1-212ENST00000521951 GZMBP10144 247 aa17.29■□□□□ 0.36
PVT1-212ENST00000521951 S100A4P26447 101 aaKnown RBP17.29■□□□□ 0.36
PVT1-212ENST00000521951 RPS20P60866 119 aaKnown RBP17.29■□□□□ 0.36
PVT1-212ENST00000521951 C15orf54Q8N8G6 183 aa17.29■□□□□ 0.36
PVT1-212ENST00000521951 OR10G8Q8NGN5 311 aa17.29■□□□□ 0.36
PVT1-212ENST00000521951 NOP10Q9NPE3 64 aaKnown RBP17.29■□□□□ 0.36
PVT1-212ENST00000521951 DAZ2Q13117 558 aaKnown RBP17.27■□□□□ 0.36
PVT1-212ENST00000521951 C9orf85Q96MD7 179 aa17.27■□□□□ 0.36
PVT1-212ENST00000521951 SPXQ9BT56 116 aa17.27■□□□□ 0.36
PVT1-212ENST00000521951 XKRY2A2RUG3 117 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 H3BVH4 76 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 ARMS2P0C7Q2 107 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 FAM222AQ5U5X8 452 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 IL36BQ9NZH7 164 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 DKK2Q9UBU2 259 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 CELA1Q9UNI1 258 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 V9GYV3 84 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 STAB2Q8WWQ8 2551 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 MUC4Q99102 2169 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 CT83Q5H943 113 aa17.26■□□□□ 0.35
PVT1-212ENST00000521951 TGP01266 2768 aa17.24■□□□□ 0.35
PVT1-212ENST00000521951 LYRM9A8MSI8 78 aa17.24■□□□□ 0.35
PVT1-212ENST00000521951 A8MWL6 223 aa17.24■□□□□ 0.35
PVT1-212ENST00000521951 SPART-AS1P0CW21 52 aa17.24■□□□□ 0.35
PVT1-212ENST00000521951 RNF212Q495C1 297 aa17.24■□□□□ 0.35
PVT1-212ENST00000521951 EDA2RQ9HAV5 297 aa17.24■□□□□ 0.35
PVT1-212ENST00000521951 SPINK4O60575 86 aa17.23■□□□□ 0.35
PVT1-212ENST00000521951 IGLC6P0CF74 106 aa17.23■□□□□ 0.35
PVT1-212ENST00000521951 MED14OSP0DP75 135 aa17.23■□□□□ 0.35
PVT1-212ENST00000521951 SCRT2Q9NQ03 307 aa17.23■□□□□ 0.35
PVT1-212ENST00000521951 CXorf65A6NEN9 183 aa17.22■□□□□ 0.35
PVT1-212ENST00000521951 M0R2P5 195 aa17.22■□□□□ 0.35
PVT1-212ENST00000521951 APOC3P02656 99 aa17.22■□□□□ 0.35
PVT1-212ENST00000521951 Q6ZTI0 123 aa17.22■□□□□ 0.35
PVT1-212ENST00000521951 SSBP4Q9BWG4 385 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms