RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 SMIM17P0DL12 118 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 MS4A6AQ9H2W1 248 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 ITPR3Q14573 2671 aa13.55□□□□□ -0.24
TRAM1-205ENST00000521425 TRAV26-2A0A0B4J265 109 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 SCGB1A1P11684 91 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 H3BRN7 92 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 NPFFO15130 113 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 C11orf44Q8N8P7 122 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 IGLV11-55A0A075B6I3 123 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 IGHV4-30-2A0A087WSY4 118 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 A0A1B0GWB2 263 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 CKS2P33552 79 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 CACNG7P62955 275 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 C10orf99Q6UWK7 81 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 C16orf92Q96LL3 132 aa13.54□□□□□ -0.24
TRAM1-205ENST00000521425 CENPVL3A0A0U1RRI6 287 aa13.53□□□□□ -0.24
TRAM1-205ENST00000521425 IGLV2-11P01706 119 aa13.53□□□□□ -0.24
TRAM1-205ENST00000521425 EGR2P11161 476 aaPredicted RBP13.53□□□□□ -0.24
TRAM1-205ENST00000521425 MYCNOSP40205 109 aa13.53□□□□□ -0.24
TRAM1-205ENST00000521425 C11orf71Q6IPW1 123 aa13.53□□□□□ -0.24
TRAM1-205ENST00000521425 LY6G5BQ8NDX9 201 aa13.53□□□□□ -0.24
TRAM1-205ENST00000521425 RPL7P18124 248 aaKnown RBP13.53□□□□□ -0.24
TRAM1-205ENST00000521425 EDN2P20800 178 aa13.53□□□□□ -0.24
TRAM1-205ENST00000521425 MLST8Q9BVC4 326 aa13.52□□□□□ -0.24
TRAM1-205ENST00000521425 SMIM20Q8N5G0 67 aa13.52□□□□□ -0.25
TRAM1-205ENST00000521425 ITPR2Q14571 2701 aa13.52□□□□□ -0.25
TRAM1-205ENST00000521425 FXYD2P54710 66 aa13.52□□□□□ -0.25
TRAM1-205ENST00000521425 PVRIGQ6DKI7 326 aa13.52□□□□□ -0.25
TRAM1-205ENST00000521425 C8orf31Q8N9H6 132 aa13.52□□□□□ -0.25
TRAM1-205ENST00000521425 FLNBO75369 2602 aaKnown RBP13.51□□□□□ -0.25
TRAM1-205ENST00000521425 F8W735 103 aaPredicted RBP13.51□□□□□ -0.25
TRAM1-205ENST00000521425 M0R381 172 aa13.51□□□□□ -0.25
TRAM1-205ENST00000521425 SCGB2A1O75556 95 aa13.51□□□□□ -0.25
TRAM1-205ENST00000521425 LMO4P61968 165 aa13.51□□□□□ -0.25
TRAM1-205ENST00000521425 M0R1W7 72 aa13.51□□□□□ -0.25
TRAM1-205ENST00000521425 KLF5Q13887 457 aaPredicted RBP13.51□□□□□ -0.25
TRAM1-205ENST00000521425 PRSS1P07477 247 aa13.51□□□□□ -0.25
TRAM1-205ENST00000521425 UNQ9165/PRO28630Q6UXU0 137 aa13.51□□□□□ -0.25
TRAM1-205ENST00000521425 RIGQ13278 110 aa13.5□□□□□ -0.25
TRAM1-205ENST00000521425 SYT8Q8NBV8 401 aa13.5□□□□□ -0.25
TRAM1-205ENST00000521425 FAM162BQ5T6X4 162 aa13.49□□□□□ -0.25
TRAM1-205ENST00000521425 ANAPC13Q9BS18 74 aa13.49□□□□□ -0.25
TRAM1-205ENST00000521425 MT-ATP8P03928 68 aa13.49□□□□□ -0.25
TRAM1-205ENST00000521425 HIST2H2BCQ6DN03 193 aa13.49□□□□□ -0.25
TRAM1-205ENST00000521425 SMAD5-AS1Q9Y6J3 95 aa13.49□□□□□ -0.25
TRAM1-205ENST00000521425 FBXL19-AS1Q494R0 122 aa13.49□□□□□ -0.25
TRAM1-205ENST00000521425 PRELID3AQ96N28 172 aa13.49□□□□□ -0.25
TRAM1-205ENST00000521425 SIRPDQ9H106 197 aa13.49□□□□□ -0.25
TRAM1-205ENST00000521425 SMAD7O15105 426 aaKnown RBP13.48□□□□□ -0.25
TRAM1-205ENST00000521425 TGFAP01135 160 aa13.48□□□□□ -0.25
TRAM1-205ENST00000521425 S100A4P26447 101 aaKnown RBP13.48□□□□□ -0.25
TRAM1-205ENST00000521425 SPANXB1Q9NS25 103 aaPredicted RBP13.48□□□□□ -0.25
TRAM1-205ENST00000521425 ODF3BA8MYP8 253 aa13.48□□□□□ -0.25
TRAM1-205ENST00000521425 NDFIP1Q9BT67 221 aa13.48□□□□□ -0.25
TRAM1-205ENST00000521425 MRPL16Q9NX20 251 aaKnown RBP13.48□□□□□ -0.25
TRAM1-205ENST00000521425 A0A1B0GW15 77 aa13.48□□□□□ -0.25
TRAM1-205ENST00000521425 C19orf71A6NCJ1 209 aa13.48□□□□□ -0.25
TRAM1-205ENST00000521425 CRXO43186 299 aaPredicted RBP13.48□□□□□ -0.25
TRAM1-205ENST00000521425 PRR25Q96S07 402 aa13.48□□□□□ -0.25
TRAM1-205ENST00000521425 INS-IGF2F8WCM5 200 aa13.47□□□□□ -0.25
TRAM1-205ENST00000521425 FAM231DQ6ZW35 169 aa13.47□□□□□ -0.25
TRAM1-205ENST00000521425 CHCHD1Q96BP2 118 aaKnown RBP13.47□□□□□ -0.25
TRAM1-205ENST00000521425 METTL26Q96S19 204 aa13.47□□□□□ -0.25
TRAM1-205ENST00000521425 KLF12Q9Y4X4 402 aa13.47□□□□□ -0.25
TRAM1-205ENST00000521425 ARL3P36405 182 aa13.47□□□□□ -0.25
TRAM1-205ENST00000521425 UBE2E1P51965 193 aa13.47□□□□□ -0.25
TRAM1-205ENST00000521425 NDUFA3O95167 84 aa13.46□□□□□ -0.25
TRAM1-205ENST00000521425 TRAV41A0A0B4J266 112 aa13.46□□□□□ -0.25
TRAM1-205ENST00000521425 H3BVH4 76 aa13.46□□□□□ -0.25
TRAM1-205ENST00000521425 BOD1L2Q8IYS8 172 aa13.46□□□□□ -0.25
TRAM1-205ENST00000521425 CCDC140Q96MF4 163 aa13.46□□□□□ -0.25
TRAM1-205ENST00000521425 SPANXN1Q5VSR9 72 aa13.46□□□□□ -0.26
TRAM1-205ENST00000521425 DUX3Q96PT4 197 aa13.46□□□□□ -0.26
TRAM1-205ENST00000521425 APOMO95445 188 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 AVPP01185 164 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 TMEM78Q5T7P6 136 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 LINC01545Q5VT33 79 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 NPBQ8NG41 125 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 OVOL3O00110 214 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 ZNF747Q9BV97 191 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 NBEAL2Q6ZNJ1 2754 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 MGPP08493 103 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 ZNF479Q96JC4 524 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 PRSS22Q9GZN4 317 aa13.45□□□□□ -0.26
TRAM1-205ENST00000521425 NPYP01303 97 aa13.44□□□□□ -0.26
TRAM1-205ENST00000521425 GAGE13Q4V321 117 aa13.44□□□□□ -0.26
TRAM1-205ENST00000521425 ZNF418Q8TF45 676 aaPredicted RBP13.44□□□□□ -0.26
TRAM1-205ENST00000521425 FGF6P10767 208 aa13.44□□□□□ -0.26
TRAM1-205ENST00000521425 C8orf86Q6ZUL3 223 aa13.44□□□□□ -0.26
TRAM1-205ENST00000521425 TTC9CQ8N5M4 171 aa13.44□□□□□ -0.26
TRAM1-205ENST00000521425 DTX2Q86UW9 622 aa13.43□□□□□ -0.26
TRAM1-205ENST00000521425 PIMREGQ9BSJ6 248 aa13.43□□□□□ -0.26
TRAM1-205ENST00000521425 AGPAT4-IT1Q9H0P7 198 aa13.43□□□□□ -0.26
TRAM1-205ENST00000521425 PAX8Q06710 450 aa13.43□□□□□ -0.26
TRAM1-205ENST00000521425 EEF1AKMT3Q96AZ1 226 aa13.43□□□□□ -0.26
TRAM1-205ENST00000521425 A0A1B0GXF2 115 aa13.43□□□□□ -0.26
TRAM1-205ENST00000521425 RNASE4P34096 147 aaKnown RBP13.43□□□□□ -0.26
TRAM1-205ENST00000521425 TCTEX1D4Q5JR98 221 aa13.43□□□□□ -0.26
TRAM1-205ENST00000521425 RNF5Q99942 180 aa13.43□□□□□ -0.26
TRAM1-205ENST00000521425 DKK2Q9UBU2 259 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms