RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 M0R2P5 195 aa13.64□□□□□ -0.23
PABPC1-217ENST00000521067 IFNA5P01569 189 aa13.64□□□□□ -0.23
PABPC1-217ENST00000521067 CRYGDP07320 174 aa13.64□□□□□ -0.23
PABPC1-217ENST00000521067 TAS2R45P59539 299 aa13.64□□□□□ -0.23
PABPC1-217ENST00000521067 Q5VSD8 79 aa13.64□□□□□ -0.23
PABPC1-217ENST00000521067 GOLT1AQ6ZVE7 132 aa13.64□□□□□ -0.23
PABPC1-217ENST00000521067 TXNDC17Q9BRA2 123 aa13.64□□□□□ -0.23
PABPC1-217ENST00000521067 FLG2Q5D862 2391 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-217ENST00000521067 C9JCJ5 164 aa13.63□□□□□ -0.23
PABPC1-217ENST00000521067 F6UZH7 168 aa13.63□□□□□ -0.23
PABPC1-217ENST00000521067 SMR3BP02814 79 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-217ENST00000521067 TYMSP04818 313 aa13.63□□□□□ -0.23
PABPC1-217ENST00000521067 RPL12P30050 165 aaKnown RBP13.63□□□□□ -0.23
PABPC1-217ENST00000521067 SCGB1C1Q8TD33 95 aa13.63□□□□□ -0.23
PABPC1-217ENST00000521067 GATA1P15976 413 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-217ENST00000521067 GCSHP23434 173 aa13.62□□□□□ -0.23
PABPC1-217ENST00000521067 GNG5P63218 68 aa13.62□□□□□ -0.23
PABPC1-217ENST00000521067 CMTM2Q8TAZ6 248 aa13.62□□□□□ -0.23
PABPC1-217ENST00000521067 MARVELD1Q9BSK0 173 aa13.62□□□□□ -0.23
PABPC1-217ENST00000521067 TRAV21A0A0B4J279 112 aa13.61□□□□□ -0.23
PABPC1-217ENST00000521067 LRCOL1A6NCL2 159 aa13.61□□□□□ -0.23
PABPC1-217ENST00000521067 HAMPP81172 84 aa13.61□□□□□ -0.23
PABPC1-217ENST00000521067 SGK494Q96LW2 274 aa13.61□□□□□ -0.23
PABPC1-217ENST00000521067 TREM1Q9NP99 234 aa13.61□□□□□ -0.23
PABPC1-217ENST00000521067 HMGB3O15347 200 aaKnown RBP13.6□□□□□ -0.23
PABPC1-217ENST00000521067 RAB2AP61019 212 aa13.6□□□□□ -0.23
PABPC1-217ENST00000521067 DPPA3Q6W0C5 159 aa13.6□□□□□ -0.23
PABPC1-217ENST00000521067 C11orf21Q9P2W6 132 aa13.6□□□□□ -0.23
PABPC1-217ENST00000521067 IGHV3-38A0A0C4DH36 116 aa13.59□□□□□ -0.23
PABPC1-217ENST00000521067 ZNF80P51504 273 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-217ENST00000521067 TIRAPP58753 221 aa13.59□□□□□ -0.23
PABPC1-217ENST00000521067 ARL6IP6Q8N6S5 226 aa13.59□□□□□ -0.23
PABPC1-217ENST00000521067 NHLRC2Q8NBF2 726 aa13.59□□□□□ -0.23
PABPC1-217ENST00000521067 FRZBQ92765 325 aa13.59□□□□□ -0.23
PABPC1-217ENST00000521067 ACOT6Q3I5F7 207 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-217ENST00000521067 FAM74A1Q5RGS3 127 aa13.58□□□□□ -0.24
PABPC1-217ENST00000521067 PQLC2Q6ZP29 291 aa13.58□□□□□ -0.24
PABPC1-217ENST00000521067 C10orf126Q8N4M7 172 aa13.58□□□□□ -0.24
PABPC1-217ENST00000521067 SLC25A29Q8N8R3 303 aa13.58□□□□□ -0.24
PABPC1-217ENST00000521067 SDF2L1Q9HCN8 221 aa13.58□□□□□ -0.24
PABPC1-217ENST00000521067 A0A1W2PPV4 95 aa13.57□□□□□ -0.24
PABPC1-217ENST00000521067 SSNA1O43805 119 aa13.57□□□□□ -0.24
PABPC1-217ENST00000521067 LINC01556Q5JQF7 62 aa13.57□□□□□ -0.24
PABPC1-217ENST00000521067 CFAP126Q5VTH2 177 aa13.57□□□□□ -0.24
PABPC1-217ENST00000521067 SH2D6Q7Z4S9 175 aa13.57□□□□□ -0.24
PABPC1-217ENST00000521067 ASB13Q8WXK3 278 aa13.57□□□□□ -0.24
PABPC1-217ENST00000521067 IBA57-AS1B1ANH7 110 aa13.56□□□□□ -0.24
PABPC1-217ENST00000521067 ZNF876PQ49A33 203 aa13.56□□□□□ -0.24
PABPC1-217ENST00000521067 OR10G9Q8NGN4 311 aa13.56□□□□□ -0.24
PABPC1-217ENST00000521067 OR10G7Q8NGN6 311 aa13.56□□□□□ -0.24
PABPC1-217ENST00000521067 KCNS1Q96KK3 526 aa13.56□□□□□ -0.24
PABPC1-217ENST00000521067 IGHV3-73A0A0B4J1V6 119 aa13.55□□□□□ -0.24
PABPC1-217ENST00000521067 FBLL1A6NHQ2 334 aaKnown RBP13.55□□□□□ -0.24
PABPC1-217ENST00000521067 RS1O15537 224 aa13.55□□□□□ -0.24
PABPC1-217ENST00000521067 PET100P0DJ07 73 aa13.55□□□□□ -0.24
PABPC1-217ENST00000521067 PPT1P50897 306 aa13.55□□□□□ -0.24
PABPC1-217ENST00000521067 IGLV5-52A0A0A0MRZ9 124 aa13.54□□□□□ -0.24
PABPC1-217ENST00000521067 PFN1P07737 140 aaKnown RBP13.54□□□□□ -0.24
PABPC1-217ENST00000521067 ARL14EPLP0DKL9 152 aa13.54□□□□□ -0.24
PABPC1-217ENST00000521067 TMEM75Q8N9X5 138 aa13.54□□□□□ -0.24
PABPC1-217ENST00000521067 PGPEP1LA6NFU8 196 aa13.53□□□□□ -0.24
PABPC1-217ENST00000521067 PSCAO43653 123 aa13.53□□□□□ -0.24
PABPC1-217ENST00000521067 IGLV2-11P01706 119 aa13.53□□□□□ -0.24
PABPC1-217ENST00000521067 C9orf85Q96MD7 179 aa13.53□□□□□ -0.24
PABPC1-217ENST00000521067 Q9HAA7 133 aa13.53□□□□□ -0.24
PABPC1-217ENST00000521067 FAM30AQ9NZY2 134 aa13.53□□□□□ -0.24
PABPC1-217ENST00000521067 TRBV6-4A0A1B0GX49 114 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 IGHV3-30P01768 117 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 IGHV3-33P01772 117 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 TCRAP04437 139 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 IGHV3-30-3P0DP02 117 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 IGHV3-30-5P0DP03 117 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 OR10J3Q5JRS4 329 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 Q6ZSN1 163 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 Q8N814 137 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 SUN5Q8TC36 379 aa13.52□□□□□ -0.25
PABPC1-217ENST00000521067 TRAV8-6A0A0B4J262 113 aa13.51□□□□□ -0.25
PABPC1-217ENST00000521067 STAG3L2P0CL84 134 aa13.51□□□□□ -0.25
PABPC1-217ENST00000521067 STAG3L3P0CL85 134 aa13.51□□□□□ -0.25
PABPC1-217ENST00000521067 RNASE3P12724 160 aaKnown RBP13.51□□□□□ -0.25
PABPC1-217ENST00000521067 Q8N3U1 123 aa13.51□□□□□ -0.25
PABPC1-217ENST00000521067 NTN5Q8WTR8 489 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-217ENST00000521067 PRADC1Q9BSG0 188 aa13.51□□□□□ -0.25
PABPC1-217ENST00000521067 PSG8Q9UQ74 426 aa13.51□□□□□ -0.25
PABPC1-217ENST00000521067 A6NHS1 94 aa13.5□□□□□ -0.25
PABPC1-217ENST00000521067 TAAR5O14804 337 aa13.5□□□□□ -0.25
PABPC1-217ENST00000521067 GCGP01275 180 aa13.5□□□□□ -0.25
PABPC1-217ENST00000521067 CDC34P49427 236 aaPredicted RBP13.5□□□□□ -0.25
PABPC1-217ENST00000521067 RHOHQ15669 191 aa13.5□□□□□ -0.25
PABPC1-217ENST00000521067 ZNF506Q5JVG8 444 aa13.5□□□□□ -0.25
PABPC1-217ENST00000521067 LELP1Q5T871 98 aa13.5□□□□□ -0.25
PABPC1-217ENST00000521067 RAB24Q969Q5 203 aa13.5□□□□□ -0.25
PABPC1-217ENST00000521067 TMEM70Q9BUB7 260 aa13.5□□□□□ -0.25
PABPC1-217ENST00000521067 GCHFRP30047 84 aa13.49□□□□□ -0.25
PABPC1-217ENST00000521067 WFDC2Q14508 124 aa13.49□□□□□ -0.25
PABPC1-217ENST00000521067 C5orf17Q8NAS9 161 aa13.49□□□□□ -0.25
PABPC1-217ENST00000521067 HSD17B11Q8NBQ5 300 aa13.49□□□□□ -0.25
PABPC1-217ENST00000521067 OR2G3Q8NGZ4 309 aa13.49□□□□□ -0.25
PABPC1-217ENST00000521067 PTH2Q96A98 100 aa13.49□□□□□ -0.25
PABPC1-217ENST00000521067 NDFIP1Q9BT67 221 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms