RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ZNF726P1	Q15940	193 aa		16.81	■□□□□ 0.28
CNOT7-204	ENST00000518885	TTC32	Q5I0X7	151 aa		16.81	■□□□□ 0.28
CNOT7-204	ENST00000518885	PRNT	Q86SH4	94 aa		16.81	■□□□□ 0.28
CNOT7-204	ENST00000518885	SGK494	Q96LW2	274 aa		16.81	■□□□□ 0.28
CNOT7-204	ENST00000518885	HHLA3	Q9XRX5	114 aa		16.81	■□□□□ 0.28
CNOT7-204	ENST00000518885	MAP1LC3B2	A6NCE7	125 aa		16.8	■□□□□ 0.28
CNOT7-204	ENST00000518885	SMLR1	H3BR10	107 aa		16.8	■□□□□ 0.28
CNOT7-204	ENST00000518885		M0R2P5	195 aa		16.8	■□□□□ 0.28
CNOT7-204	ENST00000518885	IGHV3-53	P01767	116 aa		16.8	■□□□□ 0.28
CNOT7-204	ENST00000518885	PFN1	P07737	140 aa	Known RBP	16.8	■□□□□ 0.28
CNOT7-204	ENST00000518885	HIST1H2BA	Q96A08	127 aa		16.8	■□□□□ 0.28
CNOT7-204	ENST00000518885	VSIG2	Q96IQ7	327 aa		16.8	■□□□□ 0.28
CNOT7-204	ENST00000518885	MAP1LC3B	Q9GZQ8	125 aa		16.8	■□□□□ 0.28
CNOT7-204	ENST00000518885	IGHV3-16	A0A0C4DH30	117 aa		16.79	■□□□□ 0.28
CNOT7-204	ENST00000518885	UMAD1	C9J7I0	102 aa		16.79	■□□□□ 0.28
CNOT7-204	ENST00000518885	RTL8C	O15255	209 aa		16.79	■□□□□ 0.28
CNOT7-204	ENST00000518885	GCG	P01275	180 aa		16.79	■□□□□ 0.28
CNOT7-204	ENST00000518885	TCEAL7	Q9BRU2	100 aa		16.79	■□□□□ 0.28
CNOT7-204	ENST00000518885	UPK3B	Q9BT76	320 aa		16.79	■□□□□ 0.28
CNOT7-204	ENST00000518885		Q9H8V8	135 aa		16.79	■□□□□ 0.28
CNOT7-204	ENST00000518885	MRPS16	Q9Y3D3	137 aa	Known RBP	16.79	■□□□□ 0.28
CNOT7-204	ENST00000518885	SEC11B	P0C7V7	166 aa		16.78	■□□□□ 0.28
CNOT7-204	ENST00000518885	FGF8	P55075	233 aa	Predicted RBP	16.78	■□□□□ 0.28
CNOT7-204	ENST00000518885	UBE2G2	P60604	165 aa		16.78	■□□□□ 0.28
CNOT7-204	ENST00000518885	PCNP	Q8WW12	178 aa	Known RBP	16.78	■□□□□ 0.28
CNOT7-204	ENST00000518885	NACA	E9PAV3	2078 aa		16.77	■□□□□ 0.28
CNOT7-204	ENST00000518885		A0A096LPF7	62 aa		16.77	■□□□□ 0.28
CNOT7-204	ENST00000518885	GNRH2	O43555	120 aa		16.77	■□□□□ 0.28
CNOT7-204	ENST00000518885	TYMS	P04818	313 aa		16.77	■□□□□ 0.28
CNOT7-204	ENST00000518885	CRYBA4	P53673	196 aa		16.77	■□□□□ 0.28
CNOT7-204	ENST00000518885	MRPL23	Q16540	153 aa	Known RBP	16.77	■□□□□ 0.28
CNOT7-204	ENST00000518885	ESRG	Q1W209	222 aa		16.77	■□□□□ 0.28
CNOT7-204	ENST00000518885	ZNF471	Q9BX82	626 aa	Predicted RBP	16.77	■□□□□ 0.28
CNOT7-204	ENST00000518885	TRAV4	A0A0B4J268	109 aa		16.76	■□□□□ 0.27
CNOT7-204	ENST00000518885	FAM74A7	A6NL05	159 aa		16.76	■□□□□ 0.27
CNOT7-204	ENST00000518885	PEX7	O00628	323 aa		16.76	■□□□□ 0.27
CNOT7-204	ENST00000518885	BCL2L11	O43521	198 aa		16.76	■□□□□ 0.27
CNOT7-204	ENST00000518885	IGLV2-11	P01706	119 aa		16.76	■□□□□ 0.27
CNOT7-204	ENST00000518885	FHL2	Q14192	279 aa		16.76	■□□□□ 0.27
CNOT7-204	ENST00000518885	OR4C5	Q8NGB2	326 aa		16.76	■□□□□ 0.27
CNOT7-204	ENST00000518885	C8orf49	Q96NF6	230 aa		16.76	■□□□□ 0.27
CNOT7-204	ENST00000518885	ARL2-SNX15	V9GYD0	113 aa		16.76	■□□□□ 0.27
CNOT7-204	ENST00000518885	PFDN1	O60925	122 aa		16.75	■□□□□ 0.27
CNOT7-204	ENST00000518885	ORM1	P02763	201 aa		16.75	■□□□□ 0.27
CNOT7-204	ENST00000518885	DPPA3	Q6W0C5	159 aa		16.75	■□□□□ 0.27
CNOT7-204	ENST00000518885	FHIT	P49789	147 aa		16.74	■□□□□ 0.27
CNOT7-204	ENST00000518885	C6orf223	Q8N319	242 aa		16.74	■□□□□ 0.27
CNOT7-204	ENST00000518885	DNAH2	Q9P225	4427 aa		16.73	■□□□□ 0.27
CNOT7-204	ENST00000518885		A0A1W2PPQ1	181 aa		16.73	■□□□□ 0.27
CNOT7-204	ENST00000518885	CIDEA	O60543	219 aa		16.73	■□□□□ 0.27
CNOT7-204	ENST00000518885	UBE2G1	P62253	170 aa		16.73	■□□□□ 0.27
CNOT7-204	ENST00000518885	ZNF479	Q96JC4	524 aa		16.73	■□□□□ 0.27
CNOT7-204	ENST00000518885		C9JCJ5	164 aa		16.72	■□□□□ 0.27
CNOT7-204	ENST00000518885	ZNF80	P51504	273 aa	Predicted RBP	16.72	■□□□□ 0.27
CNOT7-204	ENST00000518885	CST9LP1	Q5W188	147 aa		16.72	■□□□□ 0.27
CNOT7-204	ENST00000518885	OR11H4	Q8NGC9	324 aa		16.72	■□□□□ 0.27
CNOT7-204	ENST00000518885	FMC1	Q96HJ9	113 aa		16.72	■□□□□ 0.27
CNOT7-204	ENST00000518885	ZFP30	Q9Y2G7	519 aa		16.72	■□□□□ 0.27
CNOT7-204	ENST00000518885	MUC4	Q99102	2169 aa		16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	FABP5P3	A8MUU1	101 aa		16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	SFTA3	P0C7M3	94 aa		16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	TPT1	P13693	172 aa	Known RBP	16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	BTF3	P20290	206 aa	Known RBP	16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	SRI	P30626	198 aa		16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	ZNF876P	Q49A33	203 aa		16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	NEGR1	Q7Z3B1	354 aa		16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885		Q86TA4	180 aa		16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	FAM213B	Q8TBF2	198 aa		16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	SFT2D1	Q8WV19	159 aa		16.71	■□□□□ 0.27
CNOT7-204	ENST00000518885	TRAV34	A0A0B4J273	112 aa		16.7	■□□□□ 0.26
CNOT7-204	ENST00000518885	EIF5AL1	Q6IS14	154 aa	Known RBP	16.7	■□□□□ 0.26
CNOT7-204	ENST00000518885	SH2D6	Q7Z4S9	175 aa		16.7	■□□□□ 0.26
CNOT7-204	ENST00000518885	LINC00479	Q96M42	142 aa		16.7	■□□□□ 0.26
CNOT7-204	ENST00000518885	TXNDC17	Q9BRA2	123 aa		16.7	■□□□□ 0.26
CNOT7-204	ENST00000518885		A0A1B0GVY2	172 aa		16.69	■□□□□ 0.26
CNOT7-204	ENST00000518885	S100A4	P26447	101 aa	Known RBP	16.69	■□□□□ 0.26
CNOT7-204	ENST00000518885	PTH2	Q96A98	100 aa		16.69	■□□□□ 0.26
CNOT7-204	ENST00000518885	LGALSL	Q3ZCW2	172 aa	Predicted RBP	16.68	■□□□□ 0.26
CNOT7-204	ENST00000518885	TMUB2	Q71RG4	321 aa		16.68	■□□□□ 0.26
CNOT7-204	ENST00000518885	MBD3L1	Q8WWY6	194 aa		16.68	■□□□□ 0.26
CNOT7-204	ENST00000518885	SIVA1	O15304	175 aa		16.67	■□□□□ 0.26
CNOT7-204	ENST00000518885	S100A9	P06702	114 aa	Known RBP	16.67	■□□□□ 0.26
CNOT7-204	ENST00000518885	GYPE	P15421	78 aa		16.67	■□□□□ 0.26
CNOT7-204	ENST00000518885	C11orf21	Q9P2W6	132 aa		16.67	■□□□□ 0.26
CNOT7-204	ENST00000518885	TRBV6-1	A0A0K0K1D8	114 aa		16.66	■□□□□ 0.26
CNOT7-204	ENST00000518885		K7EQD1	137 aa		16.66	■□□□□ 0.26
CNOT7-204	ENST00000518885	ASIP	P42127	132 aa		16.66	■□□□□ 0.26
CNOT7-204	ENST00000518885	C9orf85	Q96MD7	179 aa		16.66	■□□□□ 0.26
CNOT7-204	ENST00000518885	DNAH17	Q9UFH2	4485 aa		16.65	■□□□□ 0.26
CNOT7-204	ENST00000518885	FAT2	Q9NYQ8	4349 aa		16.65	■□□□□ 0.26
CNOT7-204	ENST00000518885	NXPH4	O95158	308 aa		16.65	■□□□□ 0.26
CNOT7-204	ENST00000518885	H2AFB1	P0C5Y9	115 aa		16.65	■□□□□ 0.26
CNOT7-204	ENST00000518885	AKR1C3	P42330	323 aa		16.65	■□□□□ 0.26
CNOT7-204	ENST00000518885	FAM162B	Q5T6X4	162 aa		16.65	■□□□□ 0.26
CNOT7-204	ENST00000518885	LYPD5	Q6UWN5	251 aa		16.65	■□□□□ 0.26
CNOT7-204	ENST00000518885		B4DEV8	164 aa		16.64	■□□□□ 0.25
CNOT7-204	ENST00000518885	TEX46	H3BTG2	121 aa		16.64	■□□□□ 0.25
CNOT7-204	ENST00000518885	PAGE4	O60829	102 aa		16.64	■□□□□ 0.25
CNOT7-204	ENST00000518885	RAB5C	P51148	216 aa		16.64	■□□□□ 0.25
CNOT7-204	ENST00000518885	PIK3CD-AS1	Q5SR53	167 aa		16.64	■□□□□ 0.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms