RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 NRKQ7Z2Y5 1582 aa3.06□□□□□ -1.92
CTNNA1-202ENST00000517533 Q8N2B8 174 aa3.06□□□□□ -1.92
CTNNA1-202ENST00000517533 OTOSQ8NHW6 89 aa3.06□□□□□ -1.92
CTNNA1-202ENST00000517533 PP6455Q8WZ26 134 aa3.06□□□□□ -1.92
CTNNA1-202ENST00000517533 RAB37Q96AX2 223 aa3.06□□□□□ -1.92
CTNNA1-202ENST00000517533 RPL26L1Q9UNX3 145 aaKnown RBP3.06□□□□□ -1.92
CTNNA1-202ENST00000517533 STRCP1A6NGW2 1772 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 TRBV20-1A0A075B6N2 111 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 ZNF705FA8MVS1 300 aaPredicted RBP3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 C5orf67F2Z3F1 127 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 BAALC-AS2P0C853 105 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 PYYP10082 97 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 LSM3P62310 102 aaKnown RBP3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 CIRBPQ14011 172 aaKnown RBP3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 ZNF846Q147U1 533 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 OR5AS1Q8N127 324 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 C10orf111Q8N326 155 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 LINC00471Q8N535 108 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 PPP3R2Q96LZ3 170 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 CCDC167Q9P0B6 97 aa3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 BOKQ9UMX3 212 aaPredicted RBP3.05□□□□□ -1.92
CTNNA1-202ENST00000517533 SHPRHQ149N8 1683 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 PXDNQ92626 1479 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 MYH7P12883 1935 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 A6NN06 94 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 SNAPC5O75971 98 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 UBL3O95164 117 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 TRACP01848 142 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 RPL26P61254 145 aaKnown RBP3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 CDK6Q00534 326 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 PRR9Q5T870 116 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 FAM19A2Q8N3H0 131 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 PSMF1Q92530 271 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 CST11Q9H112 138 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 USP54Q70EL1 1684 aa3.04□□□□□ -1.92
CTNNA1-202ENST00000517533 NFAT5O94916 1531 aa3.03□□□□□ -1.92
CTNNA1-202ENST00000517533 IQSEC2Q5JU85 1478 aa3.03□□□□□ -1.92
CTNNA1-202ENST00000517533 A0A0G2JQZ4 141 aa3.03□□□□□ -1.92
CTNNA1-202ENST00000517533 PROSCO94903 275 aa3.03□□□□□ -1.92
CTNNA1-202ENST00000517533 IGKV3-11P04433 115 aa3.03□□□□□ -1.92
CTNNA1-202ENST00000517533 CKS2P33552 79 aa3.03□□□□□ -1.92
CTNNA1-202ENST00000517533 SNX29P2Q8IUI4 249 aa3.03□□□□□ -1.92
CTNNA1-202ENST00000517533 OR5AK2Q8NH90 309 aa3.03□□□□□ -1.92
CTNNA1-202ENST00000517533 GLI3P10071 1580 aa3.03□□□□□ -1.92
CTNNA1-202ENST00000517533 PEAK1Q9H792 1746 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 ALS2Q96Q42 1657 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 PHRF1Q9P1Y6 1649 aaKnown RBP3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 P0C880 135 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 IGFBP7Q16270 282 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 MIC13Q5XKP0 118 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 Q6ZTI0 123 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 Q6ZUT4 128 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 SNRNP25Q9BV90 132 aaKnown RBP3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 TIMM21Q9BVV7 248 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 ABCC6O95255 1503 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 GPR179Q6PRD1 2367 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 LTN1O94822 1766 aa3.02□□□□□ -1.93
CTNNA1-202ENST00000517533 ZFC3H1O60293 1989 aaKnown RBP3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 TANC2Q9HCD6 1990 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 CUL9Q8IWT3 2517 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 LOC107984156A0A0G2JMH3 177 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 IGLV6-57P01721 117 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 RBP4P02753 201 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 GNG4P50150 75 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 DSCR4P56555 118 aaPredicted RBP3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 ARL17AQ8IVW1 177 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 ATOH7Q8N100 152 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 LINC00269Q8N2A0 174 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 MUCL1Q96DR8 90 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 CYTL1Q9NRR1 136 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 MPC1Q9Y5U8 109 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 PTPRBP23467 1997 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 RGPD1P0DJD0 1748 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 ROBO1Q9Y6N7 1651 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 NHSL1Q5SYE7 1610 aa3.01□□□□□ -1.93
CTNNA1-202ENST00000517533 MARF1Q9Y4F3 1742 aaKnown RBP3□□□□□ -1.93
CTNNA1-202ENST00000517533 SDHAF1A6NFY7 115 aa3□□□□□ -1.93
CTNNA1-202ENST00000517533 E7EUB6 86 aa3□□□□□ -1.93
CTNNA1-202ENST00000517533 S100A8P05109 93 aa3□□□□□ -1.93
CTNNA1-202ENST00000517533 HIST1H1DP16402 221 aaKnown RBP3□□□□□ -1.93
CTNNA1-202ENST00000517533 ARPINQ7Z6K5 226 aa3□□□□□ -1.93
CTNNA1-202ENST00000517533 KCNRGQ8N5I3 272 aa3□□□□□ -1.93
CTNNA1-202ENST00000517533 PLXNA3P51805 1871 aa3□□□□□ -1.93
CTNNA1-202ENST00000517533 FAM208AQ9UK61 1670 aaKnown RBP2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 TRAV12-2A0A075B6T6 113 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 TRAV12-1A0A0B4J245 112 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 C3orf85A0A1B0GTC6 90 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 M0R2P5 195 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 CD2P06729 351 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 ETV6P41212 452 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 PPP3R1P63098 170 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 C3orf62Q6ZUJ4 267 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 Q8TAT8 98 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 TMEM254Q8TBM7 123 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 SPACA4Q8TDM5 124 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 SEC11CQ9BY50 192 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 ZFP30Q9Y2G7 519 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 SHANK1Q9Y566 2161 aa2.99□□□□□ -1.93
CTNNA1-202ENST00000517533 COL14A1Q05707 1796 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms