RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 GAGE12IP0CL82 117 aa10.32□□□□□ -0.76
SCARNA21-201ENST00000517026 TCL1AP56279 114 aa10.32□□□□□ -0.76
SCARNA21-201ENST00000517026 Q6ZTI0 123 aa10.32□□□□□ -0.76
SCARNA21-201ENST00000517026 LINC00612Q8N6U2 182 aa10.32□□□□□ -0.76
SCARNA21-201ENST00000517026 ZFP30Q9Y2G7 519 aa10.32□□□□□ -0.76
SCARNA21-201ENST00000517026 LTAP01374 205 aa10.31□□□□□ -0.76
SCARNA21-201ENST00000517026 IFNA1P01562 189 aa10.31□□□□□ -0.76
SCARNA21-201ENST00000517026 PFN1P07737 140 aaKnown RBP10.31□□□□□ -0.76
SCARNA21-201ENST00000517026 BCL2P10415 239 aa10.31□□□□□ -0.76
SCARNA21-201ENST00000517026 CRIP1P50238 77 aa10.31□□□□□ -0.76
SCARNA21-201ENST00000517026 TDRG1Q3Y452 100 aa10.31□□□□□ -0.76
SCARNA21-201ENST00000517026 IBA57Q5T440 356 aaKnown RBP10.31□□□□□ -0.76
SCARNA21-201ENST00000517026 NHLRC2Q8NBF2 726 aa10.31□□□□□ -0.76
SCARNA21-201ENST00000517026 ZC2HC1AQ96GY0 325 aa10.31□□□□□ -0.76
SCARNA21-201ENST00000517026 TRGV11A0A075B6L2 103 aa10.3□□□□□ -0.76
SCARNA21-201ENST00000517026 TRGV1A0A0A0MS02 117 aa10.3□□□□□ -0.76
SCARNA21-201ENST00000517026 IGHV3-16A0A0C4DH30 117 aa10.3□□□□□ -0.76
SCARNA21-201ENST00000517026 TYMSP04818 313 aa10.3□□□□□ -0.76
SCARNA21-201ENST00000517026 ZNF415Q09FC8 603 aa10.3□□□□□ -0.76
SCARNA21-201ENST00000517026 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
SCARNA21-201ENST00000517026 DERL1Q9BUN8 251 aa10.3□□□□□ -0.76
SCARNA21-201ENST00000517026 SDF2L1Q9HCN8 221 aa10.3□□□□□ -0.76
SCARNA21-201ENST00000517026 MRPL16Q9NX20 251 aaKnown RBP10.3□□□□□ -0.76
SCARNA21-201ENST00000517026 HERC2O95714 4834 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 ALMS1Q8TCU4 4167 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 IGHV4-4A0A075B6R2 117 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 SPINK4O60575 86 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 S100A9P06702 114 aaKnown RBP10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 RPL35P42766 123 aaKnown RBP10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 MEF2BQ02080 365 aaPredicted RBP10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 COX8CQ7Z4L0 72 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 BAGE2Q86Y30 109 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 LYPD6BQ8NI32 183 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 PCNPQ8WW12 178 aaKnown RBP10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 TXNDC17Q9BRA2 123 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 VAX2Q9UIW0 290 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 APLNQ9ULZ1 77 aa10.29□□□□□ -0.76
SCARNA21-201ENST00000517026 IGKV3D-20A0A0C4DH25 116 aa10.28□□□□□ -0.76
SCARNA21-201ENST00000517026 FABP5P3A8MUU1 101 aa10.28□□□□□ -0.76
SCARNA21-201ENST00000517026 F5H768 121 aa10.28□□□□□ -0.76
SCARNA21-201ENST00000517026 SH2D1AO60880 128 aa10.28□□□□□ -0.76
SCARNA21-201ENST00000517026 ATP5G1P05496 136 aa10.28□□□□□ -0.76
SCARNA21-201ENST00000517026 TEX261Q6UWH6 196 aa10.28□□□□□ -0.76
SCARNA21-201ENST00000517026 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
SCARNA21-201ENST00000517026 TRGV2A0A075B6R0 118 aa10.27□□□□□ -0.77
SCARNA21-201ENST00000517026 RAB19A4D1S5 217 aa10.27□□□□□ -0.77
SCARNA21-201ENST00000517026 PDE6DO43924 150 aa10.27□□□□□ -0.77
SCARNA21-201ENST00000517026 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
SCARNA21-201ENST00000517026 TMEM88Q6PEY1 159 aa10.27□□□□□ -0.77
SCARNA21-201ENST00000517026 MED9Q9NWA0 146 aa10.27□□□□□ -0.77
SCARNA21-201ENST00000517026 RBFOX3A6NFN3 312 aa10.26□□□□□ -0.77
SCARNA21-201ENST00000517026 M0R036 132 aa10.26□□□□□ -0.77
SCARNA21-201ENST00000517026 ORM1P02763 201 aa10.26□□□□□ -0.77
SCARNA21-201ENST00000517026 HOXA5P20719 270 aa10.26□□□□□ -0.77
SCARNA21-201ENST00000517026 ZNF674Q2M3X9 581 aa10.26□□□□□ -0.77
SCARNA21-201ENST00000517026 SPXQ9BT56 116 aa10.26□□□□□ -0.77
SCARNA21-201ENST00000517026 MLST8Q9BVC4 326 aa10.26□□□□□ -0.77
SCARNA21-201ENST00000517026 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
SCARNA21-201ENST00000517026 TAGLN2P37802 199 aaKnown RBP10.25□□□□□ -0.77
SCARNA21-201ENST00000517026 OR5I1Q13606 314 aa10.25□□□□□ -0.77
SCARNA21-201ENST00000517026 LGALS9BQ3B8N2 356 aa10.25□□□□□ -0.77
SCARNA21-201ENST00000517026 CENPWQ5EE01 88 aa10.25□□□□□ -0.77
SCARNA21-201ENST00000517026 ZNF506Q5JVG8 444 aa10.25□□□□□ -0.77
SCARNA21-201ENST00000517026 LINC00476Q8WZB0 136 aa10.25□□□□□ -0.77
SCARNA21-201ENST00000517026 NDUFAF3Q9BU61 184 aa10.25□□□□□ -0.77
SCARNA21-201ENST00000517026 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
SCARNA21-201ENST00000517026 GRIFINA4D1Z8 144 aa10.24□□□□□ -0.77
SCARNA21-201ENST00000517026 B4DEV8 164 aa10.24□□□□□ -0.77
SCARNA21-201ENST00000517026 KRBOX1C9JBD0 128 aa10.24□□□□□ -0.77
SCARNA21-201ENST00000517026 M0R2P5 195 aa10.24□□□□□ -0.77
SCARNA21-201ENST00000517026 LY6G6CO95867 125 aa10.24□□□□□ -0.77
SCARNA21-201ENST00000517026 TCTAP57738 103 aa10.24□□□□□ -0.77
SCARNA21-201ENST00000517026 TOR2AQ5JU69 321 aa10.24□□□□□ -0.77
SCARNA21-201ENST00000517026 ZNF575Q86XF7 245 aa10.24□□□□□ -0.77
SCARNA21-201ENST00000517026 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
SCARNA21-201ENST00000517026 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
SCARNA21-201ENST00000517026 PRR27Q6MZM9 219 aa10.23□□□□□ -0.77
SCARNA21-201ENST00000517026 RASL10AQ92737 203 aa10.23□□□□□ -0.77
SCARNA21-201ENST00000517026 FAM210BQ96KR6 192 aa10.23□□□□□ -0.77
SCARNA21-201ENST00000517026 C9orf85Q96MD7 179 aa10.23□□□□□ -0.77
SCARNA21-201ENST00000517026 C18orf15Q96N68 181 aa10.23□□□□□ -0.77
SCARNA21-201ENST00000517026 TRBV20OR9-2A0A075B6H5 130 aa10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 TRAV26-1A0A087WT03 109 aa10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 A0A0J9YY99 117 aa10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 PGPEP1LA6NFU8 196 aa10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 C9JCJ5 164 aa10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 S100A4P26447 101 aaKnown RBP10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 GNG4P50150 75 aa10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 RPL19P84098 196 aaKnown RBP10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 POM121L12Q8N7R1 296 aa10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 EIF5A2Q9GZV4 153 aaKnown RBP10.22□□□□□ -0.77
SCARNA21-201ENST00000517026 SFTA3P0C7M3 94 aa10.21□□□□□ -0.77
SCARNA21-201ENST00000517026 MGST1P10620 155 aaKnown RBP10.21□□□□□ -0.77
SCARNA21-201ENST00000517026 ASIPP42127 132 aa10.21□□□□□ -0.77
SCARNA21-201ENST00000517026 ZNF479Q96JC4 524 aa10.21□□□□□ -0.77
SCARNA21-201ENST00000517026 FAM210AQ96ND0 272 aa10.21□□□□□ -0.77
SCARNA21-201ENST00000517026 PCLOQ9Y6V0 5065 aa10.21□□□□□ -0.78
SCARNA21-201ENST00000517026 H3BVH4 76 aa10.2□□□□□ -0.78
SCARNA21-201ENST00000517026 NUDT3O95989 172 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms