RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PRTFDC1Q9NRG1 225 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 C19orf12Q9NSK7 152 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 TRPM1Q7Z4N2 1603 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 HMGXB3Q12766 1538 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 TCRBV3S1A0A5B6 114 aa-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 LDOC1O95751 146 aaPredicted RBP-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 AP3S2P59780 193 aa-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 ALKAL1Q6UXT8 129 aa-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 PDCL2Q8N4E4 241 aa-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 MSANTD3Q96H12 275 aa-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 C2orf50Q96LR7 162 aa-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 CACYBPQ9HB71 228 aaKnown RBP-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 MED11Q9P086 117 aa-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 ENPP5Q9UJA9 477 aa-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 ASB4Q9Y574 426 aa-4.48□□□□□ -3.13
RNU6-539P-201ENST00000516665 NUP155O75694 1391 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 ANKRD31Q8N7Z5 1873 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 A8MT66 165 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 PITX3O75364 302 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 COX8AP10176 69 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 BCAP31P51572 246 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 DYNLT3P51808 116 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 CLDN12P56749 244 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 UBE2BP63146 152 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 HMGN5P82970 282 aaKnown RBP-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 IMPG1Q17R60 797 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 HSP90AA4PQ58FG1 418 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 HRCT1Q6UXD1 115 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 FAM151BQ6UXP7 276 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 C20orf197Q8N268 126 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 TEX29Q8N6K0 151 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 RABL2BQ9UNT1 228 aa-4.49□□□□□ -3.13
RNU6-539P-201ENST00000516665 KIAA0556O60303 1618 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 LRP5O75197 1615 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 N4BP2Q86UW6 1770 aaPredicted RBP-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 TRAV26-2A0A0B4J265 109 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 TMEM256-PLSCR3K7ERE1 68 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 CST7O76096 145 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 OR5G3P0C626 314 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 DNAJB13P59910 316 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 SNRPD2P62316 118 aaKnown RBP-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 POU6F1Q14863 301 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 ALX1Q15699 326 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 TMEM86BQ8N661 226 aa-4.5□□□□□ -3.13
RNU6-539P-201ENST00000516665 KIF13AQ9H1H9 1805 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 MAP3K1Q13233 1512 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 EVPLLA8MZ36 301 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 RER1O15258 196 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 TNFAIP8O95379 198 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 CST4P01036 141 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 OR2T2Q6IF00 324 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 ANKRD29Q8N6D5 301 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 TEX37Q96LM6 180 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 SELENOSQ9BQE4 189 aa-4.51□□□□□ -3.13
RNU6-539P-201ENST00000516665 A0A1B0GV50 99 aa-4.52□□□□□ -3.13
RNU6-539P-201ENST00000516665 K7ERJ3 54 aa-4.52□□□□□ -3.13
RNU6-539P-201ENST00000516665 RBP1P09455 135 aa-4.52□□□□□ -3.13
RNU6-539P-201ENST00000516665 PMAIP1Q13794 54 aa-4.52□□□□□ -3.13
RNU6-539P-201ENST00000516665 IL18Q14116 193 aa-4.52□□□□□ -3.13
RNU6-539P-201ENST00000516665 CYP2G1PQ6ZSU1 146 aa-4.52□□□□□ -3.13
RNU6-539P-201ENST00000516665 VPS29Q9UBQ0 182 aa-4.52□□□□□ -3.13
RNU6-539P-201ENST00000516665 TPRKBQ9Y3C4 175 aa-4.52□□□□□ -3.13
RNU6-539P-201ENST00000516665 PRUNE2Q8WUY3 3088 aa-4.52□□□□□ -3.13
RNU6-539P-201ENST00000516665 SYNJ2BP-COX16A0A087WUM0 186 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 CXorf51AA0A1B0GTR3 108 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 TINCRA0A1B0GVN0 87 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 A0A1B0GW15 77 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 WRBO00258 174 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 CNIH1O95406 144 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 CDC34P49427 236 aaPredicted RBP-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 CLDN8P56748 225 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 UBE2D3P61077 147 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 UBE2D2P62837 147 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 RRN3P1Q2M238 152 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 CCSMST1Q4G0I0 132 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 BCL2L15Q5TBC7 163 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 KRT222Q8N1A0 295 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 FAM216BQ8N7L0 139 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 OR5AK2Q8NH90 309 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 CCDC77Q9BR77 488 aa-4.53□□□□□ -3.13
RNU6-539P-201ENST00000516665 NRXN2Q9P2S2 1712 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 J3QRK9 145 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 ATP6V1G2O95670 118 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 OTCP00480 354 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 SMIM17P0DL12 118 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 HIST1H3AP68431 136 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 HIST2H3PS2Q5TEC6 136 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 C3orf33Q6P1S2 294 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 TNFAIP8L2Q6P589 184 aaPredicted RBP-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 DNM1P34Q6PK57 102 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 STX19Q8N4C7 294 aa-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 CICQ96RK0 1608 aaPredicted RBP-4.54□□□□□ -3.14
RNU6-539P-201ENST00000516665 PARP14Q460N5 1801 aa-4.55□□□□□ -3.14
RNU6-539P-201ENST00000516665 EDDM3BP56851 147 aa-4.55□□□□□ -3.14
RNU6-539P-201ENST00000516665 DEFA3P59666 94 aa-4.55□□□□□ -3.14
RNU6-539P-201ENST00000516665 TMEM91Q6ZNR0 172 aa-4.55□□□□□ -3.14
RNU6-539P-201ENST00000516665 LINC00523Q86TU6 105 aa-4.55□□□□□ -3.14
RNU6-539P-201ENST00000516665 DIRC1Q969H9 104 aa-4.55□□□□□ -3.14
RNU6-539P-201ENST00000516665 SIGMAR1Q99720 223 aa-4.55□□□□□ -3.14
RNU6-539P-201ENST00000516665 COX16Q9P0S2 106 aa-4.55□□□□□ -3.14
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms