RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 MRPL18Q9H0U6 180 aaKnown RBP5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 F2Z2F3 143 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 M0R2Z0 102 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 PHOX2AO14813 284 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST1H2BKO60814 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 S100A6P06703 90 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST1H2BJP06899 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ARMS2P0C7Q2 107 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TRGC1P0CF51 173 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST1H2BOP23527 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST1H2BBP33778 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST1H2BDP58876 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST1H2BCP62807 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST2H2BEQ16778 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 BEAN1Q3B7T3 259 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ANXA2RQ3ZCQ2 193 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 MUC21Q5SSG8 566 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 GFI1BQ5VTD9 330 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 LYZL1Q6UWQ5 148 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 FAM159AQ6UWV7 190 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 Q6ZQT7 251 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 STHQ8IWL8 128 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST1H2BHQ93079 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 KCNS1Q96KK3 526 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 CLUHP3Q96NS8 147 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST1H2BNQ99877 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIST1H2BMQ99879 126 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 FAM110AQ9BQ89 295 aa5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 MCRIP2Q9BUT9 160 aaKnown RBP5.65□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TRAV12-2A0A075B6T6 113 aa5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 RBMY1BA6NDE4 496 aaKnown RBP5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 RBMY1EA6NEQ0 496 aaKnown RBP5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 APCSP02743 223 aa5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 RBMY1DP0C7P1 496 aaKnown RBP5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 ASIPP42127 132 aa5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 FXYD7P58549 80 aa5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SHISA2Q6UWI4 295 aa5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 C12orf54Q6X4T0 127 aa5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 ZNF575Q86XF7 245 aa5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 TMEM158Q8WZ71 300 aa5.64□□□□□ -1.51
SCARNA20.1-201ENST00000516009 VWFP04275 2813 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 MUC21A0A0G2JKD1 596 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 MUC21A0A140T8X8 626 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 H3BVH4 76 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 ZNF324O75467 553 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 AMBPP02760 352 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 CD7P09564 240 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 OR5AL1P0C617 328 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 MED14OSP0DP75 135 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 S100A4P26447 101 aaKnown RBP5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 NDUFA6P56556 154 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SSTP61278 116 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 CACNG7P62955 275 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SLAQ13239 276 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 TWIST1Q15672 202 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 DNLZQ5SXM8 178 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 TRPT1Q86TN4 253 aaKnown RBP5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 GATD1Q8NB37 220 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 WFDC9Q8NEX5 89 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SPATA3Q8NHX4 192 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SSBP4Q9BWG4 385 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 CNFNQ9BYD5 112 aa5.63□□□□□ -1.51
SCARNA20.1-201ENST00000516009 IGHV1OR15-1A0A075B7D0 117 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 CRXO43186 299 aaPredicted RBP5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 GNRH2O43555 120 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SNAI2O43623 268 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 INSP01308 110 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 NTF3P20783 257 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 NUTF2P61970 127 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SNRPEP62304 92 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 TDRG1Q3Y452 100 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 ZNF493Q6ZR52 646 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 GTSCR1Q86UQ5 136 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 C20orf144Q9BQM9 153 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 C19orf73Q9NVV2 129 aa5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 TIMM8BQ9Y5J9 83 aaPredicted RBP5.62□□□□□ -1.51
SCARNA20.1-201ENST00000516009 TRGV11A0A075B6L2 103 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 IGHV4-4A0A075B6R2 117 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 LOC105371267A0A1B0GV96 52 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 C5orf52A6NGY3 159 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 FBN1P35555 2871 aaKnown RBP5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 KIAA1644Q3SXP7 199 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SPANXN1Q5VSR9 72 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SMIM15Q7Z3B0 74 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 OR10AG1Q8NH19 301 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 WFDC10AQ9H1F0 79 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 XCL2Q9UBD3 114 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 PHLDA3Q9Y5J5 127 aa5.61□□□□□ -1.51
SCARNA20.1-201ENST00000516009 LOC102724200A0A096LPH7 203 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 IGHV3-16A0A0C4DH30 117 aa5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 CBY3A6NI87 242 aa5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 M0R381 172 aa5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 RBMY1A1P0DJD3 496 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 RBMY1CP0DJD4 496 aa5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 RNASE3P12724 160 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 IGLL1P15814 213 aa5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 RPL35AP18077 110 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 SRIP30626 198 aa5.6□□□□□ -1.51
SCARNA20.1-201ENST00000516009 RBMY1FQ15415 496 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms