RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 KLK12Q9UKR0 248 aa6.74□□□□□ -1.33
CLDND1-231ENST00000515620 URGCP-MRPS24S4R325 110 aa6.74□□□□□ -1.33
CLDND1-231ENST00000515620 A0A0D9SG52 128 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 UBE2L5PA0A1B0GUS4 154 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 C7orf66A4D0T2 115 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 GAGE12JA6NER3 117 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 PANO1I0J062 215 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 TYMSP04818 313 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 RPL29P47914 159 aaKnown RBP6.73□□□□□ -1.33
CLDND1-231ENST00000515620 BAXQ07812 192 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 GAGE1Q13065 139 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 GAGE4Q13068 117 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 GAGE5Q13069 117 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 IAH1Q2TAA2 248 aaPredicted RBP6.73□□□□□ -1.33
CLDND1-231ENST00000515620 ZNF876PQ49A33 203 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 GAGE13Q4V321 117 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 FFAR4Q5NUL3 377 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 DPPA3Q6W0C5 159 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 HSD17B11Q8NBQ5 300 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 DYNC2LI1Q8TCX1 351 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 PHYHIPLQ96FC7 376 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 C2orf50Q96LR7 162 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 ATP5SQ99766 215 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 SLC25A21Q9BQT8 299 aaPredicted RBP6.73□□□□□ -1.33
CLDND1-231ENST00000515620 SH3BGRL3Q9H299 93 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 UQCC1Q9NVA1 299 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 GSKIPQ9P0R6 139 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 WDR83OSQ9Y284 106 aa6.73□□□□□ -1.33
CLDND1-231ENST00000515620 C9orf170A2RU37 121 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 RBAKDNA6NC62 111 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 CST7O76096 145 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 H2AFB1P0C5Y9 115 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 H2AFB2P0C5Z0 115 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 NBEAP1P0C6P0 100 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 MGST1P10620 155 aaKnown RBP6.72□□□□□ -1.33
CLDND1-231ENST00000515620 CSN1S1P47710 185 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 GCSAMLQ5JQS6 135 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 TRIM63Q969Q1 353 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 SDF2L1Q9HCN8 221 aa6.72□□□□□ -1.33
CLDND1-231ENST00000515620 A0A087WWC5 75 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 CIDEAO60543 219 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 MBPP02686 304 aaPredicted RBP6.71□□□□□ -1.34
CLDND1-231ENST00000515620 SEC11BP0C7V7 166 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 LINC00694P0DN24 101 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 BCAP31P51572 246 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 AP3S2P59780 193 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 SPCS2Q15005 226 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 NIT1Q86X76 327 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 TOMM5Q8N4H5 51 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 FAM167A-AS1Q96KT0 104 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 C20orf85Q9H1P6 137 aa6.71□□□□□ -1.34
CLDND1-231ENST00000515620 F6UZH7 168 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 L7N2F9 121 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 INPP1P49441 399 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 VAMP2P63027 116 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 ATRAIDQ6UW56 229 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 MIR17HGQ75NE6 70 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 CYB561D1Q8N8Q1 229 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 ASB13Q8WXK3 278 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 ZC2HC1AQ96GY0 325 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 LINC01600Q96MT4 127 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 LENEPQ9Y5L5 61 aa6.7□□□□□ -1.34
CLDND1-231ENST00000515620 TRAV21A0A0B4J279 112 aa6.69□□□□□ -1.34
CLDND1-231ENST00000515620 KRTAP9-6A0A140TA67 174 aa6.69□□□□□ -1.34
CLDND1-231ENST00000515620 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
CLDND1-231ENST00000515620 HLA-DQA1P01909 254 aa6.69□□□□□ -1.34
CLDND1-231ENST00000515620 FGF7P21781 194 aa6.69□□□□□ -1.34
CLDND1-231ENST00000515620 RANP62826 216 aaKnown RBP6.69□□□□□ -1.34
CLDND1-231ENST00000515620 ZNF506Q5JVG8 444 aa6.69□□□□□ -1.34
CLDND1-231ENST00000515620 FXYD5Q96DB9 178 aa6.69□□□□□ -1.34
CLDND1-231ENST00000515620 SSBP4Q9BWG4 385 aaPredicted RBP6.69□□□□□ -1.34
CLDND1-231ENST00000515620 C1orf43Q9BWL3 253 aa6.69□□□□□ -1.34
CLDND1-231ENST00000515620 Q9UF83 564 aa6.69□□□□□ -1.34
CLDND1-231ENST00000515620 A0A087WX48 190 aa6.68□□□□□ -1.34
CLDND1-231ENST00000515620 DIRC3C9JPN6 131 aa6.68□□□□□ -1.34
CLDND1-231ENST00000515620 PRSS1P07477 247 aa6.68□□□□□ -1.34
CLDND1-231ENST00000515620 Q0VG73 95 aa6.68□□□□□ -1.34
CLDND1-231ENST00000515620 C9orf163Q8N9P6 203 aa6.68□□□□□ -1.34
CLDND1-231ENST00000515620 KCNS1Q96KK3 526 aa6.68□□□□□ -1.34
CLDND1-231ENST00000515620 LSM5Q9Y4Y9 91 aaKnown RBP6.68□□□□□ -1.34
CLDND1-231ENST00000515620 PGPEP1LA6NFU8 196 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 FAM24AA6NFZ4 105 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 OR7C2O60412 319 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 ELOBQ15370 118 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 PYDC2Q56P42 97 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 KCNIP4Q6PIL6 250 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 OR10G9Q8NGN4 311 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 OR2T35Q8NGX2 323 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 CHAC2Q8WUX2 184 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 TMED6Q8WW62 240 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 HYLS1Q96M11 299 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 SAMD10Q9BYL1 202 aa6.67□□□□□ -1.34
CLDND1-231ENST00000515620 CCSO14618 274 aa6.66□□□□□ -1.34
CLDND1-231ENST00000515620 UBE2L3P68036 154 aaKnown RBP6.66□□□□□ -1.34
CLDND1-231ENST00000515620 DGAT2L7PQ6IED9 249 aa6.66□□□□□ -1.34
CLDND1-231ENST00000515620 SDIM1Q6ZPB5 146 aa6.66□□□□□ -1.34
CLDND1-231ENST00000515620 TVP23CQ96ET8 276 aa6.66□□□□□ -1.34
CLDND1-231ENST00000515620 C9orf85Q96MD7 179 aa6.66□□□□□ -1.34
CLDND1-231ENST00000515620 NPCDR1Q9BY65 106 aa6.66□□□□□ -1.34
CLDND1-231ENST00000515620 PARLQ9H300 379 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms