RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 TVP23CQ96ET8 276 aa10.33□□□□□ -0.76
HMGCLL1-209ENST00000515546 RPH3ALQ9UNE2 315 aa10.33□□□□□ -0.76
HMGCLL1-209ENST00000515546 IGLV2-18A0A075B6J9 118 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 TRGV2A0A075B6R0 118 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 TRAV8-1A0A0A6YYK1 113 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 FAM74A7A6NL05 159 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 RTL8CO15255 209 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 ZNF415Q09FC8 603 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 OR5I1Q13606 314 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 TDRG1Q3Y452 100 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 ATG101Q9BSB4 218 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 GNG13Q9P2W3 67 aa10.32□□□□□ -0.76
HMGCLL1-209ENST00000515546 A0A1W2PRE2 83 aa10.31□□□□□ -0.76
HMGCLL1-209ENST00000515546 M0R2N4 97 aa10.31□□□□□ -0.76
HMGCLL1-209ENST00000515546 PAGE4O60829 102 aa10.31□□□□□ -0.76
HMGCLL1-209ENST00000515546 TCRAP04437 139 aa10.31□□□□□ -0.76
HMGCLL1-209ENST00000515546 MUC21Q5SSG8 566 aa10.31□□□□□ -0.76
HMGCLL1-209ENST00000515546 MRPL16Q9NX20 251 aaKnown RBP10.31□□□□□ -0.76
HMGCLL1-209ENST00000515546 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
HMGCLL1-209ENST00000515546 A0A0J9YY99 117 aa10.3□□□□□ -0.76
HMGCLL1-209ENST00000515546 CCL18P55774 89 aa10.3□□□□□ -0.76
HMGCLL1-209ENST00000515546 RAB14P61106 215 aa10.3□□□□□ -0.76
HMGCLL1-209ENST00000515546 VSIG2Q96IQ7 327 aa10.3□□□□□ -0.76
HMGCLL1-209ENST00000515546 TREM1Q9NP99 234 aa10.3□□□□□ -0.76
HMGCLL1-209ENST00000515546 MANBALQ9NQG1 85 aa10.3□□□□□ -0.76
HMGCLL1-209ENST00000515546 MDFICQ9P1T7 246 aa10.3□□□□□ -0.76
HMGCLL1-209ENST00000515546 ARL2-SNX15V9GYD0 113 aa10.3□□□□□ -0.76
HMGCLL1-209ENST00000515546 TRGV11A0A075B6L2 103 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 TRAV21A0A0B4J279 112 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 A0A1B0GVY2 172 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 F6UZH7 168 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 IGLV2-11P01706 119 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 BCL2P10415 239 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 PPT1P50897 306 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 TMEM183BQ1AE95 376 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 FAM159AQ6UWV7 190 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 TMEM183AQ8IXX5 376 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 DNAH11Q96DT5 4516 aa10.29□□□□□ -0.76
HMGCLL1-209ENST00000515546 MUC4Q99102 2169 aa10.28□□□□□ -0.76
HMGCLL1-209ENST00000515546 SUMO1P63165 101 aaKnown RBP10.28□□□□□ -0.76
HMGCLL1-209ENST00000515546 CST9LP1Q5W188 147 aa10.28□□□□□ -0.76
HMGCLL1-209ENST00000515546 CYB561D1Q8N8Q1 229 aa10.28□□□□□ -0.76
HMGCLL1-209ENST00000515546 TMEM75Q8N9X5 138 aa10.28□□□□□ -0.76
HMGCLL1-209ENST00000515546 FAM210AQ96ND0 272 aa10.28□□□□□ -0.76
HMGCLL1-209ENST00000515546 EPDR1Q9UM22 224 aa10.28□□□□□ -0.76
HMGCLL1-209ENST00000515546 HERC2O95714 4834 aa10.28□□□□□ -0.76
HMGCLL1-209ENST00000515546 IGHV3-16A0A0C4DH30 117 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 NBDYA0A0U1RRE5 68 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 RBFOX3A6NFN3 312 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 FBLL1A6NHQ2 334 aaKnown RBP10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 K7EQM0 130 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 IFNA1P01562 189 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 TOR2AQ5JU69 321 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 ZNF506Q5JVG8 444 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 RASL10AQ92737 203 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 SPXQ9BT56 116 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 NDFIP1Q9BT67 221 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 UPK3BQ9BT76 320 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 NAGKQ9UJ70 344 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 PSG8Q9UQ74 426 aa10.27□□□□□ -0.77
HMGCLL1-209ENST00000515546 A0A096LPF7 62 aa10.26□□□□□ -0.77
HMGCLL1-209ENST00000515546 SRSF3P84103 164 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-209ENST00000515546 SGK494Q96LW2 274 aa10.26□□□□□ -0.77
HMGCLL1-209ENST00000515546 VAX2Q9UIW0 290 aa10.26□□□□□ -0.77
HMGCLL1-209ENST00000515546 MRPS16Q9Y3D3 137 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-209ENST00000515546 PRSS29PA6NIE9 313 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 TYMSP04818 313 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 ZNF80P51504 273 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 FLI1Q01543 452 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 MEF2BQ02080 365 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 FHL2Q14192 279 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 ESRGQ1W209 222 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 KCNS1Q96KK3 526 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 C8orf49Q96NF6 230 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 NKX6-2Q9C056 277 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 PRO0255Q9UI72 69 aa10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 DYNC1H1Q14204 4646 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-209ENST00000515546 SCO2A0A1W2PP80 73 aa10.24□□□□□ -0.77
HMGCLL1-209ENST00000515546 C9JQL5 133 aa10.24□□□□□ -0.77
HMGCLL1-209ENST00000515546 GNRH2O43555 120 aa10.24□□□□□ -0.77
HMGCLL1-209ENST00000515546 CRYBA4P53673 196 aa10.24□□□□□ -0.77
HMGCLL1-209ENST00000515546 SLAQ13239 276 aa10.24□□□□□ -0.77
HMGCLL1-209ENST00000515546 SOHLH1Q5JUK2 328 aa10.24□□□□□ -0.77
HMGCLL1-209ENST00000515546 C1orf134Q5TEV5 83 aa10.24□□□□□ -0.77
HMGCLL1-209ENST00000515546 MED9Q9NWA0 146 aa10.24□□□□□ -0.77
HMGCLL1-209ENST00000515546 KIAA1109Q2LD37 5005 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 LINC00862A6NCI5 91 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 M0R2P5 195 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 PEX7O00628 323 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 PAX4O43316 350 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 GCGP01275 180 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 PFN1P07737 140 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 TAGLN2P37802 199 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 PRNTQ86SH4 94 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 C11orf52Q96A22 123 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 ZNF479Q96JC4 524 aa10.23□□□□□ -0.77
HMGCLL1-209ENST00000515546 EIF5A2Q9GZV4 153 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms