RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RASL10AQ92737 203 aa8.93□□□□□ -0.98
CLCN3-210ENST00000515420 PFDN1O60925 122 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 IFNA7P01567 189 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 PFN1P07737 140 aaKnown RBP8.92□□□□□ -0.98
CLCN3-210ENST00000515420 CCL18P55774 89 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 UBE2G2P60604 165 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 SLAQ13239 276 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 LGALSLQ3ZCW2 172 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-210ENST00000515420 SMUG1Q53HV7 270 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 TMUB2Q71RG4 321 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 MBD3L1Q8WWY6 194 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 SGK494Q96LW2 274 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 SDF2L1Q9HCN8 221 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 MDFICQ9P1T7 246 aa8.92□□□□□ -0.98
CLCN3-210ENST00000515420 IGHV3-16A0A0C4DH30 117 aa8.91□□□□□ -0.98
CLCN3-210ENST00000515420 PEX7O00628 323 aa8.91□□□□□ -0.98
CLCN3-210ENST00000515420 GCGP01275 180 aa8.91□□□□□ -0.98
CLCN3-210ENST00000515420 PRNTQ86SH4 94 aa8.91□□□□□ -0.98
CLCN3-210ENST00000515420 C8orf49Q96NF6 230 aa8.91□□□□□ -0.98
CLCN3-210ENST00000515420 MRPL16Q9NX20 251 aaKnown RBP8.91□□□□□ -0.98
CLCN3-210ENST00000515420 NAGKQ9UJ70 344 aa8.91□□□□□ -0.98
CLCN3-210ENST00000515420 EPPK1P58107 5090 aaKnown RBP8.91□□□□□ -0.98
CLCN3-210ENST00000515420 M0R2P5 195 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 C1QBP02746 253 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 TYMSP04818 313 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 EIF5AL1Q6IS14 154 aaKnown RBP8.9□□□□□ -0.98
CLCN3-210ENST00000515420 Q6ZR54 194 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 LINC00336Q6ZUF6 198 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 COX8CQ7Z4L0 72 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 Q86TA4 180 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 FAM213BQ8TBF2 198 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 SFT2D1Q8WV19 159 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 FMC1Q96HJ9 113 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 PRO0255Q9UI72 69 aa8.9□□□□□ -0.98
CLCN3-210ENST00000515420 A0A0J9YY99 117 aa8.89□□□□□ -0.99
CLCN3-210ENST00000515420 TRBV6-1A0A0K0K1D8 114 aa8.89□□□□□ -0.99
CLCN3-210ENST00000515420 RAB5CP51148 216 aa8.89□□□□□ -0.99
CLCN3-210ENST00000515420 ZNF80P51504 273 aaPredicted RBP8.89□□□□□ -0.99
CLCN3-210ENST00000515420 VSIG2Q96IQ7 327 aa8.89□□□□□ -0.99
CLCN3-210ENST00000515420 ZFP30Q9Y2G7 519 aa8.89□□□□□ -0.99
CLCN3-210ENST00000515420 TRAV4A0A0B4J268 109 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 TRAV34A0A0B4J273 112 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 GNRH2O43555 120 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 H2AFB1P0C5Y9 115 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 CST9LP1Q5W188 147 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 ZNRF2Q8NHG8 242 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 LINC00479Q96M42 142 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 UPK3BQ9BT76 320 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 C11orf21Q9P2W6 132 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 LINC00588Q9Y4M8 146 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 FRAS1Q86XX4 4008 aa8.88□□□□□ -0.99
CLCN3-210ENST00000515420 A0A096LPF7 62 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 TRAV1-1A0A0B4J248 108 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 FABP5P3A8MUU1 101 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 PAX4O43316 350 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 CIDEAO60543 219 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 PAGE4O60829 102 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 UBE2G1P62253 170 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 FHL2Q14192 279 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 AKAP14Q86UN6 197 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 PTH2Q96A98 100 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 ICOSQ9Y6W8 199 aa8.87□□□□□ -0.99
CLCN3-210ENST00000515420 LTAP01374 205 aa8.86□□□□□ -0.99
CLCN3-210ENST00000515420 IGHV3-53P01767 116 aa8.86□□□□□ -0.99
CLCN3-210ENST00000515420 S100A9P06702 114 aaKnown RBP8.86□□□□□ -0.99
CLCN3-210ENST00000515420 AKR1C3P42330 323 aa8.86□□□□□ -0.99
CLCN3-210ENST00000515420 CRYBA4P53673 196 aa8.86□□□□□ -0.99
CLCN3-210ENST00000515420 SLC51BQ86UW2 128 aa8.86□□□□□ -0.99
CLCN3-210ENST00000515420 C9orf85Q96MD7 179 aa8.86□□□□□ -0.99
CLCN3-210ENST00000515420 HHLA3Q9XRX5 114 aa8.86□□□□□ -0.99
CLCN3-210ENST00000515420 MRPS16Q9Y3D3 137 aaKnown RBP8.86□□□□□ -0.99
CLCN3-210ENST00000515420 BIRC6Q9NR09 4857 aa8.86□□□□□ -0.99
CLCN3-210ENST00000515420 IGLV2-18A0A075B6J9 118 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 TRGV4A0A0C4DH28 118 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 TEX46H3BTG2 121 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 M0R2N4 97 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 ORM1P02763 201 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 SULT1A2P50226 295 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 MRPL23Q16540 153 aaKnown RBP8.85□□□□□ -0.99
CLCN3-210ENST00000515420 SOHLH1Q5JUK2 328 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 PIK3CD-AS1Q5SR53 167 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 OR4C5Q8NGB2 326 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 ZNF479Q96JC4 524 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 MANBALQ9NQG1 85 aa8.85□□□□□ -0.99
CLCN3-210ENST00000515420 NBDYA0A0U1RRE5 68 aa8.84□□□□□ -0.99
CLCN3-210ENST00000515420 SFTA3P0C7M3 94 aa8.84□□□□□ -0.99
CLCN3-210ENST00000515420 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
CLCN3-210ENST00000515420 ESRGQ1W209 222 aa8.84□□□□□ -0.99
CLCN3-210ENST00000515420 DNLZQ5SXM8 178 aa8.84□□□□□ -0.99
CLCN3-210ENST00000515420 FAM162BQ5T6X4 162 aa8.84□□□□□ -0.99
CLCN3-210ENST00000515420 ZC2HC1AQ96GY0 325 aa8.84□□□□□ -0.99
CLCN3-210ENST00000515420 TXNDC17Q9BRA2 123 aa8.84□□□□□ -0.99
CLCN3-210ENST00000515420 DNAH10Q8IVF4 4471 aa8.84□□□□□ -0.99
CLCN3-210ENST00000515420 IGKV3D-20A0A0C4DH25 116 aa8.83□□□□□ -1
CLCN3-210ENST00000515420 C9JCJ5 164 aa8.83□□□□□ -1
CLCN3-210ENST00000515420 RTL8CO15255 209 aa8.83□□□□□ -1
CLCN3-210ENST00000515420 ASIPP42127 132 aa8.83□□□□□ -1
CLCN3-210ENST00000515420 ZNF674Q2M3X9 581 aa8.83□□□□□ -1
CLCN3-210ENST00000515420 ZNF876PQ49A33 203 aa8.83□□□□□ -1
CLCN3-210ENST00000515420 TTC32Q5I0X7 151 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms