RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 LYSTQ99698 3801 aa9.86□□□□□ -0.83
USP46-209ENST00000514536 TRGV11A0A075B6L2 103 aa9.85□□□□□ -0.83
USP46-209ENST00000514536 TRGV1A0A0A0MS02 117 aa9.85□□□□□ -0.83
USP46-209ENST00000514536 SCO2A0A1W2PP80 73 aa9.85□□□□□ -0.83
USP46-209ENST00000514536 F5H768 121 aa9.85□□□□□ -0.83
USP46-209ENST00000514536 LY6G6CO95867 125 aa9.85□□□□□ -0.83
USP46-209ENST00000514536 PFN1P07737 140 aaKnown RBP9.85□□□□□ -0.83
USP46-209ENST00000514536 ZNF415Q09FC8 603 aa9.85□□□□□ -0.83
USP46-209ENST00000514536 TDRG1Q3Y452 100 aa9.85□□□□□ -0.83
USP46-209ENST00000514536 C11orf21Q9P2W6 132 aa9.85□□□□□ -0.83
USP46-209ENST00000514536 ZFP30Q9Y2G7 519 aa9.85□□□□□ -0.83
USP46-209ENST00000514536 TRBV6-1A0A0K0K1D8 114 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 SPINK4O60575 86 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 LINC00476Q8WZB0 136 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 KCNS1Q96KK3 526 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 NDUFAF3Q9BU61 184 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 SDF2L1Q9HCN8 221 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 FABP5P3A8MUU1 101 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 TYMSP04818 313 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 BLOC1S1P78537 153 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 FAM210BQ96KR6 192 aa9.84□□□□□ -0.83
USP46-209ENST00000514536 MRPL16Q9NX20 251 aaKnown RBP9.84□□□□□ -0.83
USP46-209ENST00000514536 TRGV2A0A075B6R0 118 aa9.83□□□□□ -0.84
USP46-209ENST00000514536 IGHV3-16A0A0C4DH30 117 aa9.83□□□□□ -0.84
USP46-209ENST00000514536 LTAP01374 205 aa9.83□□□□□ -0.84
USP46-209ENST00000514536 IFNA1P01562 189 aa9.83□□□□□ -0.84
USP46-209ENST00000514536 S100A9P06702 114 aaKnown RBP9.83□□□□□ -0.84
USP46-209ENST00000514536 TMEM88Q6PEY1 159 aa9.83□□□□□ -0.84
USP46-209ENST00000514536 ZC2HC1AQ96GY0 325 aa9.83□□□□□ -0.84
USP46-209ENST00000514536 CRIP1P50238 77 aa9.82□□□□□ -0.84
USP46-209ENST00000514536 LGALS9BQ3B8N2 356 aa9.82□□□□□ -0.84
USP46-209ENST00000514536 TXNDC17Q9BRA2 123 aa9.82□□□□□ -0.84
USP46-209ENST00000514536 SPXQ9BT56 116 aa9.82□□□□□ -0.84
USP46-209ENST00000514536 EPPK1P58107 5090 aaKnown RBP9.81□□□□□ -0.84
USP46-209ENST00000514536 OR5I1Q13606 314 aa9.81□□□□□ -0.84
USP46-209ENST00000514536 LGALS9CQ6DKI2 356 aa9.81□□□□□ -0.84
USP46-209ENST00000514536 COX8CQ7Z4L0 72 aa9.81□□□□□ -0.84
USP46-209ENST00000514536 BAGE2Q86Y30 109 aa9.81□□□□□ -0.84
USP46-209ENST00000514536 NHLRC2Q8NBF2 726 aa9.81□□□□□ -0.84
USP46-209ENST00000514536 IGKV3D-20A0A0C4DH25 116 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 BCL2P10415 239 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 HOXA5P20719 270 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 MEF2BQ02080 365 aaPredicted RBP9.8□□□□□ -0.84
USP46-209ENST00000514536 C11orf52Q96A22 123 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 VAX2Q9UIW0 290 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 SH2D1AO60880 128 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 IGHV3-53P01767 116 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 ORM1P02763 201 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 RPL35P42766 123 aaKnown RBP9.8□□□□□ -0.84
USP46-209ENST00000514536 ZNF674Q2M3X9 581 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 FAM162BQ5T6X4 162 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 C18orf15Q96N68 181 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 DERL1Q9BUN8 251 aa9.8□□□□□ -0.84
USP46-209ENST00000514536 M0R2P5 195 aa9.79□□□□□ -0.84
USP46-209ENST00000514536 PDE6DO43924 150 aa9.79□□□□□ -0.84
USP46-209ENST00000514536 LYPD6BQ8NI32 183 aa9.79□□□□□ -0.84
USP46-209ENST00000514536 RASL10AQ92737 203 aa9.79□□□□□ -0.84
USP46-209ENST00000514536 MED9Q9NWA0 146 aa9.79□□□□□ -0.84
USP46-209ENST00000514536 A0A0J9YY99 117 aa9.78□□□□□ -0.84
USP46-209ENST00000514536 B4DEV8 164 aa9.78□□□□□ -0.84
USP46-209ENST00000514536 M0R036 132 aa9.78□□□□□ -0.84
USP46-209ENST00000514536 TAGLN2P37802 199 aaKnown RBP9.78□□□□□ -0.84
USP46-209ENST00000514536 MLST8Q9BVC4 326 aa9.78□□□□□ -0.84
USP46-209ENST00000514536 HYDINQ4G0P3 5121 aa9.78□□□□□ -0.84
USP46-209ENST00000514536 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.84
USP46-209ENST00000514536 TRAV26-1A0A087WT03 109 aa9.77□□□□□ -0.85
USP46-209ENST00000514536 RAB19A4D1S5 217 aa9.77□□□□□ -0.85
USP46-209ENST00000514536 KRBOX1C9JBD0 128 aa9.77□□□□□ -0.85
USP46-209ENST00000514536 C9JCJ5 164 aa9.77□□□□□ -0.85
USP46-209ENST00000514536 NUDT3O95989 172 aa9.77□□□□□ -0.85
USP46-209ENST00000514536 S100A4P26447 101 aaKnown RBP9.77□□□□□ -0.85
USP46-209ENST00000514536 C15orf53Q8NAA6 179 aa9.77□□□□□ -0.85
USP46-209ENST00000514536 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
USP46-209ENST00000514536 RBFOX3A6NFN3 312 aa9.76□□□□□ -0.85
USP46-209ENST00000514536 RNASE3P12724 160 aaKnown RBP9.76□□□□□ -0.85
USP46-209ENST00000514536 TMSB15BA0A087X1C1 80 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 GRIFINA4D1Z8 144 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 SFTA3P0C7M3 94 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 P0DMU3 169 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 FAM231AP0DMU4 169 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 FAM231CP0DMU5 169 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 ASIPP42127 132 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 CENPWQ5EE01 88 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 TEX261Q6UWH6 196 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 POM121L12Q8N7R1 296 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 BIRC6Q9NR09 4857 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 PGPEP1LA6NFU8 196 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 ZNF876PQ49A33 203 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 PRR27Q6MZM9 219 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 ZNF575Q86XF7 245 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 PCNPQ8WW12 178 aaKnown RBP9.75□□□□□ -0.85
USP46-209ENST00000514536 ZNF479Q96JC4 524 aa9.75□□□□□ -0.85
USP46-209ENST00000514536 TRGV4A0A0C4DH28 118 aa9.74□□□□□ -0.85
USP46-209ENST00000514536 IGLV2-8P01709 118 aa9.74□□□□□ -0.85
USP46-209ENST00000514536 MGST1P10620 155 aaKnown RBP9.74□□□□□ -0.85
USP46-209ENST00000514536 GNG4P50150 75 aa9.74□□□□□ -0.85
USP46-209ENST00000514536 FHL2Q14192 279 aa9.74□□□□□ -0.85
USP46-209ENST00000514536 ZNF506Q5JVG8 444 aa9.74□□□□□ -0.85
USP46-209ENST00000514536 OR4C5Q8NGB2 326 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms