RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	CYB561D1	Q8N8Q1	229 aa		10.91	□□□□□ -0.66
SEC31A-238	ENST00000514326	C11orf21	Q9P2W6	132 aa		10.91	□□□□□ -0.66
SEC31A-238	ENST00000514326		A0A096LPF7	62 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	MAP1LC3B2	A6NCE7	125 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	FAM74A7	A6NL05	159 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	IFNA7	P01567	189 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	TYMS	P04818	313 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	FHL2	Q14192	279 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	ESRG	Q1W209	222 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	LINC00336	Q6ZUF6	198 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	TMEM75	Q8N9X5	138 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	SPX	Q9BT56	116 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326	MAP1LC3B	Q9GZQ8	125 aa		10.9	□□□□□ -0.66
SEC31A-238	ENST00000514326		A0A0D9SG52	128 aa		10.89	□□□□□ -0.67
SEC31A-238	ENST00000514326	GCG	P01275	180 aa		10.89	□□□□□ -0.67
SEC31A-238	ENST00000514326	SFTA3	P0C7M3	94 aa		10.89	□□□□□ -0.67
SEC31A-238	ENST00000514326	RASL10A	Q92737	203 aa		10.89	□□□□□ -0.67
SEC31A-238	ENST00000514326	ZNF479	Q96JC4	524 aa		10.89	□□□□□ -0.67
SEC31A-238	ENST00000514326	ZNF471	Q9BX82	626 aa	Predicted RBP	10.89	□□□□□ -0.67
SEC31A-238	ENST00000514326	SDF2L1	Q9HCN8	221 aa		10.89	□□□□□ -0.67
SEC31A-238	ENST00000514326	NBDY	A0A0U1RRE5	68 aa		10.88	□□□□□ -0.67
SEC31A-238	ENST00000514326	PRSS29P	A6NIE9	313 aa		10.88	□□□□□ -0.67
SEC31A-238	ENST00000514326	PEX7	O00628	323 aa		10.88	□□□□□ -0.67
SEC31A-238	ENST00000514326	PAX4	O43316	350 aa		10.88	□□□□□ -0.67
SEC31A-238	ENST00000514326	BCL2L11	O43521	198 aa		10.88	□□□□□ -0.67
SEC31A-238	ENST00000514326	SMUG1	Q53HV7	270 aa		10.88	□□□□□ -0.67
SEC31A-238	ENST00000514326	MUC4	Q99102	2169 aa		10.88	□□□□□ -0.67
SEC31A-238	ENST00000514326	HHLA3	Q9XRX5	114 aa		10.88	□□□□□ -0.67
SEC31A-238	ENST00000514326	SEC11B	P0C7V7	166 aa		10.87	□□□□□ -0.67
SEC31A-238	ENST00000514326	CRYBA4	P53673	196 aa		10.87	□□□□□ -0.67
SEC31A-238	ENST00000514326	FAM213B	Q8TBF2	198 aa		10.87	□□□□□ -0.67
SEC31A-238	ENST00000514326	KCNS1	Q96KK3	526 aa		10.87	□□□□□ -0.67
SEC31A-238	ENST00000514326	PRO0255	Q9UI72	69 aa		10.87	□□□□□ -0.67
SEC31A-238	ENST00000514326	TRGV4	A0A0C4DH28	118 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326		A0A1B0GV50	99 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326		A0A1B0GVY2	172 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326	KANTR	A0A1W2PQU2	76 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326		M0R2P5	195 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326	PFN1	P07737	140 aa	Known RBP	10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326	SAPCD1	Q5SSQ6	148 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326	C1orf134	Q5TEV5	83 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326	TMUB2	Q71RG4	321 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326		Q9H8V8	135 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326	ARL2-SNX15	V9GYD0	113 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326	PKD1	P98161	4303 aa		10.86	□□□□□ -0.67
SEC31A-238	ENST00000514326	FBLL1	A6NHQ2	334 aa	Known RBP	10.85	□□□□□ -0.67
SEC31A-238	ENST00000514326	PPT1	P50897	306 aa		10.85	□□□□□ -0.67
SEC31A-238	ENST00000514326	SLA	Q13239	276 aa		10.85	□□□□□ -0.67
SEC31A-238	ENST00000514326	ZFP69	Q49AA0	526 aa		10.85	□□□□□ -0.67
SEC31A-238	ENST00000514326	STOML3	Q8TAV4	291 aa		10.85	□□□□□ -0.67
SEC31A-238	ENST00000514326	SFT2D1	Q8WV19	159 aa		10.85	□□□□□ -0.67
SEC31A-238	ENST00000514326	NKX6-2	Q9C056	277 aa	Predicted RBP	10.85	□□□□□ -0.67
SEC31A-238	ENST00000514326	MRPS16	Q9Y3D3	137 aa	Known RBP	10.85	□□□□□ -0.67
SEC31A-238	ENST00000514326	ICOS	Q9Y6W8	199 aa		10.85	□□□□□ -0.67
SEC31A-238	ENST00000514326	TRAV4	A0A0B4J268	109 aa		10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326		C9JCJ5	164 aa		10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326	PFDN1	O60925	122 aa		10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326	CST9LP1	Q5W188	147 aa		10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326		Q86TA4	180 aa		10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326	OR4C5	Q8NGB2	326 aa		10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326	MBD3L1	Q8WWY6	194 aa		10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326	HIST1H2BA	Q96A08	127 aa		10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326	UPK3B	Q9BT76	320 aa		10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326	DYNC1H1	Q14204	4646 aa	Known RBP	10.84	□□□□□ -0.67
SEC31A-238	ENST00000514326	PKHD1	P08F94	4074 aa		10.83	□□□□□ -0.68
SEC31A-238	ENST00000514326	UMAD1	C9J7I0	102 aa		10.83	□□□□□ -0.68
SEC31A-238	ENST00000514326	PAGE4	O60829	102 aa		10.83	□□□□□ -0.68
SEC31A-238	ENST00000514326	SOHLH1	Q5JUK2	328 aa		10.83	□□□□□ -0.68
SEC31A-238	ENST00000514326	KRTAP1-5	Q9BYS1	174 aa		10.83	□□□□□ -0.68
SEC31A-238	ENST00000514326	IGKV3D-20	A0A0C4DH25	116 aa		10.82	□□□□□ -0.68
SEC31A-238	ENST00000514326	CRIP1	P50238	77 aa		10.82	□□□□□ -0.68
SEC31A-238	ENST00000514326	ZNF876P	Q49A33	203 aa		10.82	□□□□□ -0.68
SEC31A-238	ENST00000514326	DPPA3	Q6W0C5	159 aa		10.82	□□□□□ -0.68
SEC31A-238	ENST00000514326		Q6ZNX1	250 aa		10.82	□□□□□ -0.68
SEC31A-238	ENST00000514326	C6orf223	Q8N319	242 aa		10.82	□□□□□ -0.68
SEC31A-238	ENST00000514326	C9orf85	Q96MD7	179 aa		10.82	□□□□□ -0.68
SEC31A-238	ENST00000514326	DNAH11	Q96DT5	4516 aa		10.82	□□□□□ -0.68
SEC31A-238	ENST00000514326	PGPEP1L	A6NFU8	196 aa		10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	FABP5P3	A8MUU1	101 aa		10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	RNASE3	P12724	160 aa	Known RBP	10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	TPT1	P13693	172 aa	Known RBP	10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	GYPE	P15421	78 aa		10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	EIF5A	P63241	154 aa	Known RBP	10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	MRPL23	Q16540	153 aa	Known RBP	10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	TCTE3	Q8IZS6	198 aa		10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	ZC2HC1A	Q96GY0	325 aa		10.81	□□□□□ -0.68
SEC31A-238	ENST00000514326	LOC100131303	A0A0U1RQF7	123 aa		10.8	□□□□□ -0.68
SEC31A-238	ENST00000514326		K7EQD1	137 aa		10.8	□□□□□ -0.68
SEC31A-238	ENST00000514326	H2AFB1	P0C5Y9	115 aa		10.8	□□□□□ -0.68
SEC31A-238	ENST00000514326	LYPD5	Q6UWN5	251 aa		10.8	□□□□□ -0.68
SEC31A-238	ENST00000514326	FMC1	Q96HJ9	113 aa		10.8	□□□□□ -0.68
SEC31A-238	ENST00000514326	IGHV3-73	A0A0B4J1V6	119 aa		10.79	□□□□□ -0.68
SEC31A-238	ENST00000514326	RS1	O15537	224 aa		10.79	□□□□□ -0.68
SEC31A-238	ENST00000514326	SH2D1A	O60880	128 aa		10.79	□□□□□ -0.68
SEC31A-238	ENST00000514326	NXPH4	O95158	308 aa		10.79	□□□□□ -0.68
SEC31A-238	ENST00000514326	ORM1	P02763	201 aa		10.79	□□□□□ -0.68
SEC31A-238	ENST00000514326	GATA1	P15976	413 aa	Predicted RBP	10.79	□□□□□ -0.68
SEC31A-238	ENST00000514326	UBE2G1	P62253	170 aa		10.79	□□□□□ -0.68
SEC31A-238	ENST00000514326	TNP2	Q05952	138 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms