RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 TRAV1-2A0A0B4J238 106 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 M0R3E3 92 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 CTDSPLO15194 276 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 MYL9P24844 172 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 UCP3P55916 312 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 PIGPP57054 158 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 RAB11AP62491 216 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 SURF2Q15527 256 aaPredicted RBP4.37□□□□□ -1.71
CLDND1-229ENST00000513988 CYP2G1PQ6ZSU1 146 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 PRR34Q9NV39 138 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 LINC00846Q9NV44 126 aa4.37□□□□□ -1.71
CLDND1-229ENST00000513988 SMIM30A4D0T7 59 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 H3BQ15 152 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 GYG2O15488 501 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 GNRH2O43555 120 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 AMTP48728 403 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 PLP1P60201 277 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 DNAL1Q4LDG9 190 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 LINC00269Q8N2A0 174 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 OR13C8Q8NGS7 320 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 OR2T35Q8NGX2 323 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 OR2G3Q8NGZ4 309 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 TYMSOSQ8TAI1 123 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 ARL6Q9H0F7 186 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 ARV1Q9H2C2 271 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 RBKSQ9H477 322 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 RPP21Q9H633 154 aaKnown RBP4.36□□□□□ -1.71
CLDND1-229ENST00000513988 ACOT13Q9NPJ3 140 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 ZNF492Q9P255 531 aa4.36□□□□□ -1.71
CLDND1-229ENST00000513988 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 IGKV2-40A0A087WW87 121 aaPredicted RBP4.35□□□□□ -1.71
CLDND1-229ENST00000513988 FAM24AA6NFZ4 105 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 DIRC3C9JPN6 131 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 EIF3GO75821 320 aaKnown RBP eCLIP4.35□□□□□ -1.71
CLDND1-229ENST00000513988 IGKV2D-40P01614 121 aaPredicted RBP4.35□□□□□ -1.71
CLDND1-229ENST00000513988 CFC1P0CG37 223 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 IGLC2P0DOY2 106 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 HIST1H1EP10412 219 aaKnown RBP4.35□□□□□ -1.71
CLDND1-229ENST00000513988 RCVRNP35243 200 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 ZNF266Q14584 549 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 PATE2Q6UY27 113 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 LINC00305Q7Z4B0 112 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 OR10G7Q8NGN6 311 aa4.35□□□□□ -1.71
CLDND1-229ENST00000513988 LSM2Q9Y333 95 aaKnown RBP4.35□□□□□ -1.71
CLDND1-229ENST00000513988 SULT1A3P0DMM9 295 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 SULT1A4P0DMN0 295 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 PKIAP61925 76 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 SS18Q15532 418 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 C21orf62-AS1Q17RA5 79 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 HIGD2BQ4VC39 106 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 CFAP161Q6P656 301 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 ZNF486Q96H40 463 aaPredicted RBP4.34□□□□□ -1.71
CLDND1-229ENST00000513988 KCNS1Q96KK3 526 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 MIXL1Q9H2W2 232 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 COPZ2Q9P299 210 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 ANAPC10Q9UM13 185 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 PRELID1Q9Y255 219 aa4.34□□□□□ -1.71
CLDND1-229ENST00000513988 A0A087WZ39 114 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 A0A0A6YYH2 397 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 TRBV7-9A0A0J9YWB2 115 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 SMCO3A2RU48 225 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 A6NJ64 397 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 CDS2O95674 445 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 GZMBP10144 247 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 RAB5CP51148 216 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 RAB2AP61019 212 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 SELENOTP62341 195 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 ZNF674Q2M3X9 581 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 Q6AWC8 147 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 C14orf178Q8N769 122 aaPredicted RBP4.33□□□□□ -1.72
CLDND1-229ENST00000513988 C15orf56Q8N910 161 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 CHCHD5Q9BSY4 110 aa4.33□□□□□ -1.72
CLDND1-229ENST00000513988 TRBV6-8A0A0A6YYG3 113 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 TRAV8-4A0A0B4J246 113 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 A0A1W2PNN7 141 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 B3GALNT1O75752 331 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 P01737 135 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 TYMSP04818 313 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 KRTAP13-3Q3SY46 172 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 ZNF506Q5JVG8 444 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 ZFP2Q6ZN57 461 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 PHF5AQ7RTV0 110 aaKnown RBP4.32□□□□□ -1.72
CLDND1-229ENST00000513988 LYSMD2Q8IV50 215 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 C9orf16Q9BUW7 83 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 DUSP21Q9H596 190 aa4.32□□□□□ -1.72
CLDND1-229ENST00000513988 FLGP20930 4061 aaPredicted RBP4.31□□□□□ -1.72
CLDND1-229ENST00000513988 TSHBP01222 138 aa4.31□□□□□ -1.72
CLDND1-229ENST00000513988 RBX1P62877 108 aa4.31□□□□□ -1.72
CLDND1-229ENST00000513988 REG3AQ06141 175 aa4.31□□□□□ -1.72
CLDND1-229ENST00000513988 C1orf146Q5VVC0 180 aa4.31□□□□□ -1.72
CLDND1-229ENST00000513988 TMEM268Q5VZI3 342 aa4.31□□□□□ -1.72
CLDND1-229ENST00000513988 LAIR2Q6ISS4 152 aa4.31□□□□□ -1.72
CLDND1-229ENST00000513988 PRSS48Q7RTY5 328 aa4.31□□□□□ -1.72
CLDND1-229ENST00000513988 SELENOHQ8IZQ5 122 aaKnown RBP4.31□□□□□ -1.72
CLDND1-229ENST00000513988 PARLQ9H300 379 aa4.31□□□□□ -1.72
CLDND1-229ENST00000513988 A0A087X002 238 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 PRSS46E5RG02 174 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 COX7A2P2O60397 106 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 PTTG1O95997 202 aa4.3□□□□□ -1.72
CLDND1-229ENST00000513988 IAPPP10997 89 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms