RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 SFRP2Q96HF1 295 aa3.36□□□□□ -1.87
CLDND1-228ENST00000513873 SAV1Q9H4B6 383 aaPredicted RBP3.36□□□□□ -1.87
CLDND1-228ENST00000513873 DAZ1Q9NQZ3 744 aaKnown RBP3.36□□□□□ -1.87
CLDND1-228ENST00000513873 MRPL36Q9P0J6 103 aaKnown RBP3.36□□□□□ -1.87
CLDND1-228ENST00000513873 PRR14LQ5THK1 2151 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 COL7A1Q02388 2944 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 A0A087X0K7 114 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 A0A1B0GUS0 222 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 RBAKDNA6NC62 111 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 GGTLC3B5MD39 225 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 DNASE2O00115 360 aaPredicted RBP3.35□□□□□ -1.87
CLDND1-228ENST00000513873 LGALS9O00182 355 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 TCF21O43680 179 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 SCO1O75880 301 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 IGHV3-23P01764 117 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 TCRAP04437 139 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 S100A8P05109 93 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 LGALS1P09382 135 aaKnown RBP3.35□□□□□ -1.87
CLDND1-228ENST00000513873 IGLC2P0DOY2 106 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 PYYP10082 97 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 FOLR2P14207 255 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 RAB5AP20339 215 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 CDX1P47902 265 aaPredicted RBP3.35□□□□□ -1.87
CLDND1-228ENST00000513873 CMC4P56277 68 aaPredicted RBP3.35□□□□□ -1.87
CLDND1-228ENST00000513873 RPS20P60866 119 aaKnown RBP3.35□□□□□ -1.87
CLDND1-228ENST00000513873 USF2Q15853 346 aaPredicted RBP3.35□□□□□ -1.87
CLDND1-228ENST00000513873 SIGLEC15Q6ZMC9 328 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 C19orf35Q6ZS72 473 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 TMEM75Q8N9X5 138 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 OR4B1Q8NGF8 309 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 ZNF414Q96IQ9 312 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 OSTCQ9NRP0 149 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 KLF12Q9Y4X4 402 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 SOX21Q9Y651 276 aaPredicted RBP3.35□□□□□ -1.87
CLDND1-228ENST00000513873 S4R3C0 116 aa3.35□□□□□ -1.87
CLDND1-228ENST00000513873 KIAA2026Q5HYC2 2103 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 TRBV24-1A0A075B6N3 115 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 FAM231BA6NCW3 169 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 ZNF705GA8MUZ8 300 aaPredicted RBP3.34□□□□□ -1.87
CLDND1-228ENST00000513873 A8MWL6 223 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 OVOL1O14753 267 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 GATCO43716 136 aaKnown RBP3.34□□□□□ -1.87
CLDND1-228ENST00000513873 GCGP01275 180 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 P01737 135 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 MYCNOSP40205 109 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 RPS10P46783 165 aaKnown RBP3.34□□□□□ -1.87
CLDND1-228ENST00000513873 SNRPD3P62318 126 aaKnown RBP3.34□□□□□ -1.87
CLDND1-228ENST00000513873 PSG3Q16557 428 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 IBA57Q5T440 356 aaKnown RBP3.34□□□□□ -1.87
CLDND1-228ENST00000513873 TMEM78Q5T7P6 136 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 LEMD1Q68G75 181 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 Q6AWC8 147 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 RASL11AQ6T310 242 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 ATRAIDQ6UW56 229 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 Q6ZRP5 223 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 GOLT1AQ6ZVE7 132 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 FAM231DQ6ZW35 169 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 CBLN2Q8IUK8 224 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 TMEM183AQ8IXX5 376 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 FAM24BQ8N5W8 94 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 OR10J6PQ8NGY7 276 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 OCC1Q8TAD7 63 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 C4orf3Q8WVX3 66 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 ISOC2Q96AB3 205 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 FAM210BQ96KR6 192 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 NOL4LQ96MY1 436 aaPredicted RBP3.34□□□□□ -1.87
CLDND1-228ENST00000513873 PYGO2Q9BRQ0 406 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 C16orf95Q9H693 158 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 ZNF702PQ9H963 129 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 ZNF586Q9NXT0 402 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 IL36BQ9NZH7 164 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 LINC00527Q9UJ94 153 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 RPH3ALQ9UNE2 315 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 LENEPQ9Y5L5 61 aa3.34□□□□□ -1.87
CLDND1-228ENST00000513873 IGHV7-4-1A0A0J9YVY3 117 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 TRBV7-9A0A0J9YWB2 115 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 A0A1B0GW15 77 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 COLCA2A8K830 154 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 LINC01619G3V211 115 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 EIF3GO75821 320 aaKnown RBP eCLIP3.33□□□□□ -1.88
CLDND1-228ENST00000513873 NDUFA7O95182 113 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 LTAP01374 205 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 IGHV3-11P01762 117 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 MT-ND6P03923 174 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 FAM162BQ5T6X4 162 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 LCN12Q6JVE5 192 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 PRNTQ86SH4 94 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.33□□□□□ -1.88
CLDND1-228ENST00000513873 LINC00477Q96M19 166 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 RHPN1-AS1Q9BWJ2 59 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 SRD5A3Q9H8P0 318 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 NRN1Q9NPD7 142 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 ZNF331Q9NQX6 463 aaPredicted RBP3.33□□□□□ -1.88
CLDND1-228ENST00000513873 ZNF492Q9P255 531 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 NAT8BQ9UHF3 227 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 SMPXQ9UHP9 88 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 PSG8Q9UQ74 426 aa3.33□□□□□ -1.88
CLDND1-228ENST00000513873 TSSC4Q9Y5U2 329 aaPredicted RBP3.33□□□□□ -1.88
CLDND1-228ENST00000513873 URGCP-MRPS24S4R325 110 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms