RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
TCOF1-212ENST00000513538 PCNPQ8WW12 178 aaKnown RBP6.42□□□□□ -1.38
TCOF1-212ENST00000513538 RASL10AQ92737 203 aa6.42□□□□□ -1.38
TCOF1-212ENST00000513538 PHYHIPLQ96FC7 376 aa6.42□□□□□ -1.38
TCOF1-212ENST00000513538 PAXXQ9BUH6 204 aa6.42□□□□□ -1.38
TCOF1-212ENST00000513538 AAMDCQ9H7C9 122 aa6.42□□□□□ -1.38
TCOF1-212ENST00000513538 DNAH8Q96JB1 4490 aa6.42□□□□□ -1.38
TCOF1-212ENST00000513538 IGHV3-38A0A0C4DH36 116 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 TRBV7-9A0A0J9YWB2 115 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 IBA57-AS1B1ANH7 110 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 PTTG1O95997 202 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 ORM1P02763 201 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 OR10J4P0C629 311 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 ZNF266Q14584 549 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 TMEM183BQ1AE95 376 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 LINC01556Q5JQF7 62 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 FFAR4Q5NUL3 377 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 Q6ZSA8 131 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 TMEM183AQ8IXX5 376 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 TXNDC17Q9BRA2 123 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 SMIM3Q9BZL3 60 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 Q9HAA7 133 aa6.41□□□□□ -1.38
TCOF1-212ENST00000513538 TRAV4A0A0B4J268 109 aa6.4□□□□□ -1.38
TCOF1-212ENST00000513538 IGHV3-16A0A0C4DH30 117 aa6.4□□□□□ -1.38
TCOF1-212ENST00000513538 RBAKDNA6NC62 111 aa6.4□□□□□ -1.38
TCOF1-212ENST00000513538 C9JCJ5 164 aa6.4□□□□□ -1.38
TCOF1-212ENST00000513538 PSCAO43653 123 aa6.4□□□□□ -1.38
TCOF1-212ENST00000513538 TIRAPP58753 221 aa6.4□□□□□ -1.38
TCOF1-212ENST00000513538 KRTAP10-4P60372 401 aaPredicted RBP6.4□□□□□ -1.38
TCOF1-212ENST00000513538 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
TCOF1-212ENST00000513538 Q6AWC8 147 aa6.4□□□□□ -1.38
TCOF1-212ENST00000513538 Q8N3U1 123 aa6.4□□□□□ -1.38
TCOF1-212ENST00000513538 SPXQ9BT56 116 aa6.4□□□□□ -1.38
TCOF1-212ENST00000513538 DIRC3C9JPN6 131 aa6.39□□□□□ -1.39
TCOF1-212ENST00000513538 EIF3GO75821 320 aaKnown RBP eCLIP6.39□□□□□ -1.39
TCOF1-212ENST00000513538 C1QBP02746 253 aa6.39□□□□□ -1.39
TCOF1-212ENST00000513538 GATA1P15976 413 aaPredicted RBP6.39□□□□□ -1.39
TCOF1-212ENST00000513538 RANP62826 216 aaKnown RBP6.39□□□□□ -1.39
TCOF1-212ENST00000513538 Q5BKY6 102 aa6.39□□□□□ -1.39
TCOF1-212ENST00000513538 NHLRC2Q8NBF2 726 aa6.39□□□□□ -1.39
TCOF1-212ENST00000513538 SCGB1C1Q8TD33 95 aa6.39□□□□□ -1.39
TCOF1-212ENST00000513538 AQP10Q96PS8 301 aa6.39□□□□□ -1.39
TCOF1-212ENST00000513538 NAGKQ9UJ70 344 aa6.39□□□□□ -1.39
TCOF1-212ENST00000513538 TRGV11A0A075B6L2 103 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 GNRH2O43555 120 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 OR7C2O60412 319 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 IGHV3-30P01768 117 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 IGHV3-33P01772 117 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 IGHV3-30-5P0DP03 117 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 PPT1P50897 306 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 RAB2AP61019 212 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 UBE2L3P68036 154 aaKnown RBP6.38□□□□□ -1.39
TCOF1-212ENST00000513538 TDRG1Q3Y452 100 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 KHDC3LQ587J8 217 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 ARL6IP6Q8N6S5 226 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 OR4C5Q8NGB2 326 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 OR2G3Q8NGZ4 309 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 SUN5Q8TC36 379 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 TMED6Q8WW62 240 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 LENEPQ9Y5L5 61 aa6.38□□□□□ -1.39
TCOF1-212ENST00000513538 G3V3Q6 166 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 M0R2P5 195 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
TCOF1-212ENST00000513538 TYMSP04818 313 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 TAS2R45P59539 299 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 ACOT6Q3I5F7 207 aaPredicted RBP6.37□□□□□ -1.39
TCOF1-212ENST00000513538 LINC01620Q4KN68 170 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 FAM159AQ6UWV7 190 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 DPPA3Q6W0C5 159 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 PQLC2Q6ZP29 291 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 SLC25A29Q8N8R3 303 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 TVP23CQ96ET8 276 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 PSMG3Q9BT73 122 aaPredicted RBP6.37□□□□□ -1.39
TCOF1-212ENST00000513538 MED28Q9H204 178 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 OTORQ9NRC9 128 aa6.37□□□□□ -1.39
TCOF1-212ENST00000513538 LRP1Q07954 4544 aaKnown RBP6.37□□□□□ -1.39
TCOF1-212ENST00000513538 RNF222A6NCQ9 220 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 PGPA6NDG6 321 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 LECT2O14960 151 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 GIPP09681 153 aaPredicted RBP6.36□□□□□ -1.39
TCOF1-212ENST00000513538 STAG3L2P0CL84 134 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 STAG3L3P0CL85 134 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 ATP6V0CP27449 155 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 CSN1S1P47710 185 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 OR10J3Q5JRS4 329 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 SCXQ7RTU7 201 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 SH2D6Q7Z4S9 175 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 OR10G9Q8NGN4 311 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 OR10G7Q8NGN6 311 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 DEFB104AQ8WTQ1 72 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 ASB13Q8WXK3 278 aa6.36□□□□□ -1.39
TCOF1-212ENST00000513538 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.35□□□□□ -1.39
TCOF1-212ENST00000513538 IGHV3-73A0A0B4J1V6 119 aa6.35□□□□□ -1.39
TCOF1-212ENST00000513538 TRAV8-6A0A0B4J262 113 aa6.35□□□□□ -1.39
TCOF1-212ENST00000513538 A0A1W2PPV4 95 aa6.35□□□□□ -1.39
TCOF1-212ENST00000513538 F6UZH7 168 aa6.35□□□□□ -1.39
TCOF1-212ENST00000513538 SERF2P84101 59 aa6.35□□□□□ -1.39
TCOF1-212ENST00000513538 TNFSF18Q9UNG2 199 aa6.35□□□□□ -1.39
TCOF1-212ENST00000513538 TRAV8-1A0A0A6YYK1 113 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms