RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ZNF253O75346 499 aa9.49□□□□□ -0.89
SPCS3-204ENST00000513139 PDE6HQ13956 83 aa9.49□□□□□ -0.89
SPCS3-204ENST00000513139 ALKAL2Q6UX46 152 aa9.49□□□□□ -0.89
SPCS3-204ENST00000513139 CCDC28AQ8IWP9 274 aa9.49□□□□□ -0.89
SPCS3-204ENST00000513139 SFT2D1Q8WV19 159 aa9.49□□□□□ -0.89
SPCS3-204ENST00000513139 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
SPCS3-204ENST00000513139 GAGE12BA1L429 117 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 KRTAP29-1A8MX34 341 aaPredicted RBP9.48□□□□□ -0.89
SPCS3-204ENST00000513139 GAGE7O76087 117 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 GAGE12FP0CL80 117 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 GAGE12GP0CL81 117 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 GAGE12IP0CL82 117 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 DNAH10OSP0CZ25 163 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 SULT1A2P50226 295 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 SERTAD4-AS1Q5TG53 156 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 DPPA3Q6W0C5 159 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 SUN5Q8TC36 379 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 MBD3L1Q8WWY6 194 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 VSIG2Q96IQ7 327 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 TMEM70Q9BUB7 260 aa9.48□□□□□ -0.89
SPCS3-204ENST00000513139 PGPA6NDG6 321 aa9.47□□□□□ -0.89
SPCS3-204ENST00000513139 SNURFLB1AK76 121 aa9.47□□□□□ -0.89
SPCS3-204ENST00000513139 CCL20P78556 96 aa9.47□□□□□ -0.89
SPCS3-204ENST00000513139 AAMDCQ9H7C9 122 aa9.47□□□□□ -0.89
SPCS3-204ENST00000513139 TNFRSF18Q9Y5U5 241 aa9.47□□□□□ -0.89
SPCS3-204ENST00000513139 H3BS24 57 aa9.46□□□□□ -0.9
SPCS3-204ENST00000513139 K7EP13 123 aa9.46□□□□□ -0.9
SPCS3-204ENST00000513139 NXPH4O95158 308 aa9.46□□□□□ -0.9
SPCS3-204ENST00000513139 RAB5CP51148 216 aa9.46□□□□□ -0.9
SPCS3-204ENST00000513139 UBE2G2P60604 165 aa9.46□□□□□ -0.9
SPCS3-204ENST00000513139 DAZ2Q13117 558 aaKnown RBP9.46□□□□□ -0.9
SPCS3-204ENST00000513139 TMEM167BQ9NRX6 74 aa9.46□□□□□ -0.9
SPCS3-204ENST00000513139 TRAV9-2A0A087WT02 112 aa9.45□□□□□ -0.9
SPCS3-204ENST00000513139 ERCC8Q13216 396 aa9.45□□□□□ -0.9
SPCS3-204ENST00000513139 OTORQ9NRC9 128 aa9.45□□□□□ -0.9
SPCS3-204ENST00000513139 PRELID1Q9Y255 219 aa9.45□□□□□ -0.9
SPCS3-204ENST00000513139 IGKV2-40A0A087WW87 121 aaPredicted RBP9.44□□□□□ -0.9
SPCS3-204ENST00000513139 IGKV2D-40P01614 121 aaPredicted RBP9.44□□□□□ -0.9
SPCS3-204ENST00000513139 SUMO1P63165 101 aaKnown RBP9.44□□□□□ -0.9
SPCS3-204ENST00000513139 GNG5P63218 68 aa9.44□□□□□ -0.9
SPCS3-204ENST00000513139 SYT8Q8NBV8 401 aa9.44□□□□□ -0.9
SPCS3-204ENST00000513139 MRPL53Q96EL3 112 aaKnown RBP9.44□□□□□ -0.9
SPCS3-204ENST00000513139 VGLL1Q99990 258 aa9.44□□□□□ -0.9
SPCS3-204ENST00000513139 RPH3ALQ9UNE2 315 aa9.44□□□□□ -0.9
SPCS3-204ENST00000513139 FAM74A7A6NL05 159 aa9.43□□□□□ -0.9
SPCS3-204ENST00000513139 GGTLC3B5MD39 225 aa9.43□□□□□ -0.9
SPCS3-204ENST00000513139 SLC25A5P05141 298 aaKnown RBP9.43□□□□□ -0.9
SPCS3-204ENST00000513139 Q6ZTI0 123 aa9.43□□□□□ -0.9
SPCS3-204ENST00000513139 AGPAT4-IT1Q9H0P7 198 aa9.43□□□□□ -0.9
SPCS3-204ENST00000513139 TRAV1-1A0A0B4J248 108 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 A0A1W2PRE2 83 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 DIRC3C9JPN6 131 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 NPIPB6E9PJ23 425 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 PAGE4O60829 102 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 PLA2G1BP04054 148 aaKnown RBP9.42□□□□□ -0.9
SPCS3-204ENST00000513139 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 CSN1S1P47710 185 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 HAMPP81172 84 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 KIR3DS1Q14943 382 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 GFI1BQ5VTD9 330 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 TEX261Q6UWH6 196 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 CMTM2Q8TAZ6 248 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 MSRB1Q9NZV6 116 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
SPCS3-204ENST00000513139 TRGV2A0A075B6R0 118 aa9.41□□□□□ -0.9
SPCS3-204ENST00000513139 CST9LP1Q5W188 147 aa9.41□□□□□ -0.9
SPCS3-204ENST00000513139 GOLT1AQ6ZVE7 132 aa9.41□□□□□ -0.9
SPCS3-204ENST00000513139 ZNF680Q8NEM1 530 aa9.41□□□□□ -0.9
SPCS3-204ENST00000513139 NTN5Q8WTR8 489 aaPredicted RBP9.41□□□□□ -0.9
SPCS3-204ENST00000513139 PCNPQ8WW12 178 aaKnown RBP9.41□□□□□ -0.9
SPCS3-204ENST00000513139 EPDR1Q9UM22 224 aa9.41□□□□□ -0.9
SPCS3-204ENST00000513139 LY96Q9Y6Y9 160 aa9.41□□□□□ -0.9
SPCS3-204ENST00000513139 UBR4Q5T4S7 5183 aa9.41□□□□□ -0.9
SPCS3-204ENST00000513139 IGLV5-52A0A0A0MRZ9 124 aa9.4□□□□□ -0.9
SPCS3-204ENST00000513139 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
SPCS3-204ENST00000513139 IFNA7P01567 189 aa9.4□□□□□ -0.9
SPCS3-204ENST00000513139 C9orf47Q6ZRZ4 202 aa9.4□□□□□ -0.9
SPCS3-204ENST00000513139 C5orf17Q8NAS9 161 aa9.4□□□□□ -0.9
SPCS3-204ENST00000513139 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.9
SPCS3-204ENST00000513139 SGK494Q96LW2 274 aa9.4□□□□□ -0.9
SPCS3-204ENST00000513139 LINC00467Q9BRT7 94 aa9.4□□□□□ -0.9
SPCS3-204ENST00000513139 GNG13Q9P2W3 67 aa9.4□□□□□ -0.9
SPCS3-204ENST00000513139 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 SCO2A0A1W2PP80 73 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 J3KRW8 73 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 PAX4O43316 350 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 TCRAP04437 139 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 BLOC1S1P78537 153 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 LYPD5Q6UWN5 251 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 Q8TAT8 98 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 LINC00479Q96M42 142 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 ODF3Q96PU9 254 aa9.39□□□□□ -0.91
SPCS3-204ENST00000513139 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
SPCS3-204ENST00000513139 TEX46H3BTG2 121 aa9.38□□□□□ -0.91
SPCS3-204ENST00000513139 EVI2AP22794 236 aa9.38□□□□□ -0.91
SPCS3-204ENST00000513139 ZNF138P52744 262 aa9.38□□□□□ -0.91
SPCS3-204ENST00000513139 SLAQ13239 276 aa9.38□□□□□ -0.91
SPCS3-204ENST00000513139 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms