RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ZNF345Q14585 488 aa11.42□□□□□ -0.58
DDX41-213ENST00000512027 ESRGQ1W209 222 aa11.42□□□□□ -0.58
DDX41-213ENST00000512027 TDRG1Q3Y452 100 aa11.42□□□□□ -0.58
DDX41-213ENST00000512027 NDFIP1Q9BT67 221 aa11.42□□□□□ -0.58
DDX41-213ENST00000512027 PKHD1P08F94 4074 aa11.41□□□□□ -0.58
DDX41-213ENST00000512027 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
DDX41-213ENST00000512027 H3BNG1 76 aa11.41□□□□□ -0.58
DDX41-213ENST00000512027 K7EQM0 130 aa11.41□□□□□ -0.58
DDX41-213ENST00000512027 IFNA7P01567 189 aa11.41□□□□□ -0.58
DDX41-213ENST00000512027 FHL2Q14192 279 aa11.41□□□□□ -0.58
DDX41-213ENST00000512027 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
DDX41-213ENST00000512027 ZNF479Q96JC4 524 aa11.41□□□□□ -0.58
DDX41-213ENST00000512027 NBDYA0A0U1RRE5 68 aa11.4□□□□□ -0.58
DDX41-213ENST00000512027 A0A1B0GVY2 172 aa11.4□□□□□ -0.58
DDX41-213ENST00000512027 FAM74A7A6NL05 159 aa11.4□□□□□ -0.58
DDX41-213ENST00000512027 HMSDA8MTL9 139 aa11.4□□□□□ -0.58
DDX41-213ENST00000512027 SPXQ9BT56 116 aa11.4□□□□□ -0.58
DDX41-213ENST00000512027 ZNF471Q9BX82 626 aaPredicted RBP11.4□□□□□ -0.58
DDX41-213ENST00000512027 SDF2L1Q9HCN8 221 aa11.4□□□□□ -0.58
DDX41-213ENST00000512027 DNAH11Q96DT5 4516 aa11.39□□□□□ -0.59
DDX41-213ENST00000512027 A0A1B0GV50 99 aa11.39□□□□□ -0.59
DDX41-213ENST00000512027 PEX7O00628 323 aa11.39□□□□□ -0.59
DDX41-213ENST00000512027 PAX4O43316 350 aa11.39□□□□□ -0.59
DDX41-213ENST00000512027 BCL2L11O43521 198 aa11.39□□□□□ -0.59
DDX41-213ENST00000512027 CRYBA4P53673 196 aa11.39□□□□□ -0.59
DDX41-213ENST00000512027 RASL10AQ92737 203 aa11.39□□□□□ -0.59
DDX41-213ENST00000512027 DYNC1H1Q14204 4646 aaKnown RBP11.39□□□□□ -0.59
DDX41-213ENST00000512027 TRGV4A0A0C4DH28 118 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 ZFP69Q49AA0 526 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 SMUG1Q53HV7 270 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 C1orf134Q5TEV5 83 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 Q86TA4 180 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 KRTAP1-5Q9BYS1 174 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 PRO0255Q9UI72 69 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 HHLA3Q9XRX5 114 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 ARL2-SNX15V9GYD0 113 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 KIAA1109Q2LD37 5005 aa11.38□□□□□ -0.59
DDX41-213ENST00000512027 HERC2O95714 4834 aa11.37□□□□□ -0.59
DDX41-213ENST00000512027 A0A0D9SG52 128 aa11.37□□□□□ -0.59
DDX41-213ENST00000512027 KANTRA0A1W2PQU2 76 aa11.37□□□□□ -0.59
DDX41-213ENST00000512027 M0R2P5 195 aa11.37□□□□□ -0.59
DDX41-213ENST00000512027 PFN1P07737 140 aaKnown RBP11.37□□□□□ -0.59
DDX41-213ENST00000512027 FAM213BQ8TBF2 198 aa11.37□□□□□ -0.59
DDX41-213ENST00000512027 KCNS1Q96KK3 526 aa11.37□□□□□ -0.59
DDX41-213ENST00000512027 Q9H8V8 135 aa11.37□□□□□ -0.59
DDX41-213ENST00000512027 MRPS16Q9Y3D3 137 aaKnown RBP11.37□□□□□ -0.59
DDX41-213ENST00000512027 ICOSQ9Y6W8 199 aa11.37□□□□□ -0.59
DDX41-213ENST00000512027 C9JCJ5 164 aa11.36□□□□□ -0.59
DDX41-213ENST00000512027 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
DDX41-213ENST00000512027 TMUB2Q71RG4 321 aa11.36□□□□□ -0.59
DDX41-213ENST00000512027 TRAV4A0A0B4J268 109 aa11.35□□□□□ -0.59
DDX41-213ENST00000512027 PFDN1O60925 122 aa11.35□□□□□ -0.59
DDX41-213ENST00000512027 SAPCD1Q5SSQ6 148 aa11.35□□□□□ -0.59
DDX41-213ENST00000512027 CST9LP1Q5W188 147 aa11.35□□□□□ -0.59
DDX41-213ENST00000512027 DPPA3Q6W0C5 159 aa11.35□□□□□ -0.59
DDX41-213ENST00000512027 OR4C5Q8NGB2 326 aa11.35□□□□□ -0.59
DDX41-213ENST00000512027 SFT2D1Q8WV19 159 aa11.35□□□□□ -0.59
DDX41-213ENST00000512027 LOC100131303A0A0U1RQF7 123 aa11.34□□□□□ -0.59
DDX41-213ENST00000512027 PAGE4O60829 102 aa11.34□□□□□ -0.59
DDX41-213ENST00000512027 PPT1P50897 306 aa11.34□□□□□ -0.59
DDX41-213ENST00000512027 SOHLH1Q5JUK2 328 aa11.34□□□□□ -0.59
DDX41-213ENST00000512027 C6orf223Q8N319 242 aa11.34□□□□□ -0.59
DDX41-213ENST00000512027 STOML3Q8TAV4 291 aa11.34□□□□□ -0.59
DDX41-213ENST00000512027 ZC2HC1AQ96GY0 325 aa11.34□□□□□ -0.59
DDX41-213ENST00000512027 UPK3BQ9BT76 320 aa11.34□□□□□ -0.59
DDX41-213ENST00000512027 IGKV3D-20A0A0C4DH25 116 aa11.33□□□□□ -0.6
DDX41-213ENST00000512027 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.6
DDX41-213ENST00000512027 K7EQD1 137 aa11.33□□□□□ -0.6
DDX41-213ENST00000512027 RNASE3P12724 160 aaKnown RBP11.33□□□□□ -0.6
DDX41-213ENST00000512027 GYPEP15421 78 aa11.33□□□□□ -0.6
DDX41-213ENST00000512027 TNP2Q05952 138 aa11.33□□□□□ -0.6
DDX41-213ENST00000512027 HIST1H2BAQ96A08 127 aa11.33□□□□□ -0.6
DDX41-213ENST00000512027 C9orf85Q96MD7 179 aa11.33□□□□□ -0.6
DDX41-213ENST00000512027 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.6
DDX41-213ENST00000512027 PGPEP1LA6NFU8 196 aa11.32□□□□□ -0.6
DDX41-213ENST00000512027 CRIP1P50238 77 aa11.32□□□□□ -0.6
DDX41-213ENST00000512027 SLAQ13239 276 aa11.32□□□□□ -0.6
DDX41-213ENST00000512027 ZNF876PQ49A33 203 aa11.32□□□□□ -0.6
DDX41-213ENST00000512027 MBD3L1Q8WWY6 194 aa11.32□□□□□ -0.6
DDX41-213ENST00000512027 IGHV3-73A0A0B4J1V6 119 aa11.31□□□□□ -0.6
DDX41-213ENST00000512027 UMAD1C9J7I0 102 aa11.31□□□□□ -0.6
DDX41-213ENST00000512027 M0R036 132 aa11.31□□□□□ -0.6
DDX41-213ENST00000512027 NXPH4O95158 308 aa11.31□□□□□ -0.6
DDX41-213ENST00000512027 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
DDX41-213ENST00000512027 UBE2G1P62253 170 aa11.31□□□□□ -0.6
DDX41-213ENST00000512027 MRPL23Q16540 153 aaKnown RBP11.31□□□□□ -0.6
DDX41-213ENST00000512027 LGALSLQ3ZCW2 172 aaPredicted RBP11.31□□□□□ -0.6
DDX41-213ENST00000512027 ZNF506Q5JVG8 444 aa11.31□□□□□ -0.6
DDX41-213ENST00000512027 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
DDX41-213ENST00000512027 NHLRC2Q8NBF2 726 aa11.31□□□□□ -0.6
DDX41-213ENST00000512027 hCG_2014768A0A024R1R8 64 aa11.3□□□□□ -0.6
DDX41-213ENST00000512027 FABP5P3A8MUU1 101 aa11.3□□□□□ -0.6
DDX41-213ENST00000512027 SH2D1AO60880 128 aa11.3□□□□□ -0.6
DDX41-213ENST00000512027 H2AFB1P0C5Y9 115 aa11.3□□□□□ -0.6
DDX41-213ENST00000512027 SRIP30626 198 aa11.3□□□□□ -0.6
DDX41-213ENST00000512027 AKR1C3P42330 323 aa11.3□□□□□ -0.6
DDX41-213ENST00000512027 CFAP126Q5VTH2 177 aa11.3□□□□□ -0.6
DDX41-213ENST00000512027 Q6ZNX1 250 aa11.3□□□□□ -0.6
DDX41-213ENST00000512027 NEGR1Q7Z3B1 354 aa11.3□□□□□ -0.6
DDX41-213ENST00000512027 FMC1Q96HJ9 113 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms