RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 MRPL2Q5T653 305 aaKnown RBP1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 RIPPLY2Q5TAB7 128 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZFP2Q6ZN57 461 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 THAP8Q8NA92 274 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 CFHR4Q92496 578 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 CCL19Q99731 98 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 C14orf132Q9NPU4 83 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 UBE2D4Q9Y2X8 147 aa1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 F11RQ9Y624 299 aaKnown RBP1.32□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV25A0A0B4J276 109 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1B0GXF2 115 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1W2PNR3 127 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 A4D1N5 150 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 IFITM5A6NNB3 132 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 C11orf94C9JXX5 98 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 BUB3O43684 328 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 SSSCA1O60232 199 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CLDN14O95500 239 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TCRBP04435 133 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 C8orf88P0DMB2 117 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CAPZBP47756 277 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 HSPE1P61604 102 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CCL8P80075 99 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 C3AR1Q16581 482 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 LCN12Q6JVE5 192 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 ALKAL2Q6UX46 152 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 LINC00322Q6ZN03 302 aaPredicted RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 GGNQ86UU5 652 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 HSPB9Q9BQS6 159 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 KLK15Q9H2R5 256 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF257Q9Y2Q1 563 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGLV2-18A0A075B6J9 118 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGKV1D-37A0A075B6S9 117 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV12-3A0A0B4J271 114 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 GRIFINA4D1Z8 144 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TAX1BP3O14907 124 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CELA2BP08218 269 aaPredicted RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CFHR2P36980 270 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 LY6EQ16553 131 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CENPWQ5EE01 88 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 KLF17Q5JT82 389 aaPredicted RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 SMIM20Q8N5G0 67 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 Q8N9L7 120 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 GLMPQ8WWB7 406 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 MRPL24Q96A35 216 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 LINC00479Q96M42 142 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 IMMP2LQ96T52 175 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 COA3Q9Y2R0 106 aaPredicted RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV5A0A0B4J249 113 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGHV3-64DA0A0J9YX35 117 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1B0GUT8 65 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 SMIM30A4D0T7 59 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 FNDC10F2Z333 226 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 H0Y8X5 98 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPINK4O60575 86 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TIAF1O95411 115 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGKV3-20P01619 116 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 HSPB1P04792 205 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CELA2AP08217 269 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 EDN2P20800 178 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CDKN1BP46527 198 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 P2RY1P47900 373 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 FXYD3Q14802 87 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 C16orf47Q6ZP98 133 aaPredicted RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM25Q86YD3 366 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 ST6GALNAC3Q8NDV1 305 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 FMC1Q96HJ9 113 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 ABHD14BQ96IU4 210 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 SLC17A5Q9NRA2 495 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 HILPDAQ9Y5L2 63 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CSAG2Q9Y5P2 127 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A087WWC5 75 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 A8MZ25 164 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 VENTXO95231 258 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRACP01848 142 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 DEFB130BP0DP73 79 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 DEFB130AP0DP74 79 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 EGR3Q06889 387 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 SIGLEC15Q6ZMC9 328 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TEX43Q6ZNM6 134 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 C3orf22Q8N5N4 141 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 WFDC9Q8NEX5 89 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 OR5C1Q8NGR4 320 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 SRSF12Q8WXF0 261 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 MDFIQ99750 246 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZMAT3Q9HA38 289 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 PLSCR4Q9NRQ2 329 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRGV1A0A0A0MS02 117 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A26D6RGX4 464 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 JMJD7-PLA2G4BH0Y9G9 81 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 PLPP3O14495 311 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 FRS3O43559 492 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 CD7P09564 240 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 LINC00614P0C842 121 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 PSMB8P28062 276 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 TIRAPP58753 221 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 RPS26P62854 115 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 ERCC8Q13216 396 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 LAGE3Q14657 143 aa1.31□□□□□ -2.2
TRAPPC13-211ENST00000512009 C5orf64Q2M2E5 130 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms