RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 C1orf196B1AJZ1 125 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 OR11H12B2RN74 326 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 F2Z2F3 143 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 H3BMM0 161 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 GPX1P07203 203 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 CTRLP40313 264 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 CDKN1BP46527 198 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 ZNF80P51504 273 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-230ENST00000511944 DEFB131AP59861 70 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 ODF3L2Q3SX64 289 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 TDRG1Q3Y452 100 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 AMTNQ6UX39 209 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 PRIMA1Q86XR5 153 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 KCNS1Q96KK3 526 aa6.74□□□□□ -1.33
NR1I3-230ENST00000511944 ZMAT5Q9UDW3 170 aaKnown RBP6.74□□□□□ -1.33
NR1I3-230ENST00000511944 A0A1B0GXF2 115 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 C7orf71A4D174 169 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 HLA-DQA1P01909 254 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 IGLC6P0CF74 106 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
NR1I3-230ENST00000511944 RAB5BP61020 215 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 NUTF2P61970 127 aaKnown RBP6.73□□□□□ -1.33
NR1I3-230ENST00000511944 HBBP68871 147 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.73□□□□□ -1.33
NR1I3-230ENST00000511944 GATD1Q8NB37 220 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 BORCS7Q96B45 105 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 LINC00467Q9BRT7 94 aa6.73□□□□□ -1.33
NR1I3-230ENST00000511944 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
NR1I3-230ENST00000511944 F6UB75 175 aa6.72□□□□□ -1.33
NR1I3-230ENST00000511944 OR5AL1P0C617 328 aa6.72□□□□□ -1.33
NR1I3-230ENST00000511944 RIGQ13278 110 aa6.72□□□□□ -1.33
NR1I3-230ENST00000511944 C12orf54Q6X4T0 127 aa6.72□□□□□ -1.33
NR1I3-230ENST00000511944 C3orf56Q8N813 242 aa6.72□□□□□ -1.33
NR1I3-230ENST00000511944 GTSF1Q8WW33 167 aa6.72□□□□□ -1.33
NR1I3-230ENST00000511944 IGHV4-4A0A075B6R2 117 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 SNAI2O43623 268 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 ZNF324O75467 553 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-230ENST00000511944 CA1P00915 261 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-230ENST00000511944 ORM1P02763 201 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 ZNF705DP0CH99 300 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-230ENST00000511944 ZNF705BP0CI00 300 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-230ENST00000511944 ACTL10Q5JWF8 245 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 GDF5OSQ5U4N7 250 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 MORN3Q6PF18 240 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-230ENST00000511944 TRPT1Q86TN4 253 aaKnown RBP6.71□□□□□ -1.34
NR1I3-230ENST00000511944 GTSCR1Q86UQ5 136 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 STHQ8IWL8 128 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 TMEM256Q8N2U0 113 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 FER1L6-AS1Q8NA97 138 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 TP53TG3Q9ULZ0 132 aa6.71□□□□□ -1.34
NR1I3-230ENST00000511944 MAST4O15021 2626 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 IGKV3D-20A0A0C4DH25 116 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 PHOX2AO14813 284 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 RNASE4P34096 147 aaKnown RBP6.7□□□□□ -1.34
NR1I3-230ENST00000511944 ASIPP42127 132 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 TCL1AP56279 114 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 CACNG7P62955 275 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 PRR9Q5T870 116 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 GFI1BQ5VTD9 330 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 HIST2H2BDQ6DRA6 164 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 FAM159AQ6UWV7 190 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 ZNF493Q6ZR52 646 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 TMEM136Q6ZRR5 245 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 C1QTNF4Q9BXJ3 329 aa6.7□□□□□ -1.34
NR1I3-230ENST00000511944 INSP01308 110 aa6.69□□□□□ -1.34
NR1I3-230ENST00000511944 PIK3CD-AS1Q5SR53 167 aa6.69□□□□□ -1.34
NR1I3-230ENST00000511944 ZNF575Q86XF7 245 aa6.69□□□□□ -1.34
NR1I3-230ENST00000511944 NDUFAF3Q9BU61 184 aa6.69□□□□□ -1.34
NR1I3-230ENST00000511944 SCRT2Q9NQ03 307 aa6.69□□□□□ -1.34
NR1I3-230ENST00000511944 C11orf21Q9P2W6 132 aa6.69□□□□□ -1.34
NR1I3-230ENST00000511944 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 KNCNA6PVL3 124 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 SNURFLB1AK76 121 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 NXPH4O95158 308 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 TRGC2P03986 189 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 DEFB1P60022 68 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 ANXA2RQ3ZCQ2 193 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
NR1I3-230ENST00000511944 LYZL1Q6UWQ5 148 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 FRZBQ92765 325 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 PTH2Q96A98 100 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 PGLYRP4Q96LB8 373 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 SELENOKQ9Y6D0 94 aa6.68□□□□□ -1.34
NR1I3-230ENST00000511944 SETD2Q9BYW2 2564 aaPredicted RBP6.68□□□□□ -1.34
NR1I3-230ENST00000511944 NIPBLQ6KC79 2804 aaeCLIP6.68□□□□□ -1.34
NR1I3-230ENST00000511944 JMJD1CQ15652 2540 aa6.67□□□□□ -1.34
NR1I3-230ENST00000511944 IGHV1OR15-1A0A075B7D0 117 aa6.67□□□□□ -1.34
NR1I3-230ENST00000511944 KIR2DL5BA0A0G2JN68 375 aa6.67□□□□□ -1.34
NR1I3-230ENST00000511944 KIR2DL5BA0A0G2JPC4 375 aa6.67□□□□□ -1.34
NR1I3-230ENST00000511944 M0R2Z0 102 aa6.67□□□□□ -1.34
NR1I3-230ENST00000511944 CRXO43186 299 aaPredicted RBP6.67□□□□□ -1.34
NR1I3-230ENST00000511944 ARMS2P0C7Q2 107 aa6.67□□□□□ -1.34
NR1I3-230ENST00000511944 S100A4P26447 101 aaKnown RBP6.67□□□□□ -1.34
NR1I3-230ENST00000511944 SPINK13Q1W4C9 94 aa6.67□□□□□ -1.34
NR1I3-230ENST00000511944 COA6Q5JTJ3 125 aaKnown RBP6.67□□□□□ -1.34
NR1I3-230ENST00000511944 KIR2DL5AQ8N109 375 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms