RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 ATP6V0CP27449 155 aa10.42□□□□□ -0.74
COL1A1-213ENST00000511732 SUN5Q8TC36 379 aa10.42□□□□□ -0.74
COL1A1-213ENST00000511732 RAB24Q969Q5 203 aa10.42□□□□□ -0.74
COL1A1-213ENST00000511732 AQP10Q96PS8 301 aa10.42□□□□□ -0.74
COL1A1-213ENST00000511732 TRAV4A0A0B4J268 109 aa10.41□□□□□ -0.74
COL1A1-213ENST00000511732 M0R2P5 195 aa10.41□□□□□ -0.74
COL1A1-213ENST00000511732 GYPEP15421 78 aa10.41□□□□□ -0.74
COL1A1-213ENST00000511732 SRIP30626 198 aa10.41□□□□□ -0.74
COL1A1-213ENST00000511732 ZNF80P51504 273 aaPredicted RBP10.41□□□□□ -0.74
COL1A1-213ENST00000511732 WFDC10BQ8IUB3 73 aa10.41□□□□□ -0.74
COL1A1-213ENST00000511732 MAPKAPK5-AS1Q8N8E1 139 aa10.41□□□□□ -0.74
COL1A1-213ENST00000511732 PSMG3Q9BT73 122 aaPredicted RBP10.41□□□□□ -0.74
COL1A1-213ENST00000511732 SH3BGRL3Q9H299 93 aa10.41□□□□□ -0.74
COL1A1-213ENST00000511732 BATF3Q9NR55 127 aa10.41□□□□□ -0.74
COL1A1-213ENST00000511732 C11orf21Q9P2W6 132 aa10.41□□□□□ -0.74
COL1A1-213ENST00000511732 LOC100131303A0A0U1RQF7 123 aa10.4□□□□□ -0.74
COL1A1-213ENST00000511732 PTTG1O95997 202 aa10.4□□□□□ -0.74
COL1A1-213ENST00000511732 IGLV2-11P01706 119 aa10.4□□□□□ -0.74
COL1A1-213ENST00000511732 TCRAP04437 139 aa10.4□□□□□ -0.74
COL1A1-213ENST00000511732 GCHFRP30047 84 aa10.4□□□□□ -0.74
COL1A1-213ENST00000511732 FUSP35637 526 aaKnown RBP eCLIP10.4□□□□□ -0.74
COL1A1-213ENST00000511732 OR4C5Q8NGB2 326 aa10.4□□□□□ -0.74
COL1A1-213ENST00000511732 MED28Q9H204 178 aa10.4□□□□□ -0.74
COL1A1-213ENST00000511732 C5orf17Q8NAS9 161 aa10.39□□□□□ -0.75
COL1A1-213ENST00000511732 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
COL1A1-213ENST00000511732 GGTLC3B5MD39 225 aa10.38□□□□□ -0.75
COL1A1-213ENST00000511732 ORM1P02763 201 aa10.38□□□□□ -0.75
COL1A1-213ENST00000511732 SUMO1P63165 101 aaKnown RBP10.38□□□□□ -0.75
COL1A1-213ENST00000511732 TMEM75Q8N9X5 138 aa10.38□□□□□ -0.75
COL1A1-213ENST00000511732 PCNPQ8WW12 178 aaKnown RBP10.38□□□□□ -0.75
COL1A1-213ENST00000511732 ASB13Q8WXK3 278 aa10.38□□□□□ -0.75
COL1A1-213ENST00000511732 KCNS1Q96KK3 526 aa10.38□□□□□ -0.75
COL1A1-213ENST00000511732 PSG8Q9UQ74 426 aa10.38□□□□□ -0.75
COL1A1-213ENST00000511732 LY96Q9Y6Y9 160 aa10.38□□□□□ -0.75
COL1A1-213ENST00000511732 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
COL1A1-213ENST00000511732 RNF222A6NCQ9 220 aa10.37□□□□□ -0.75
COL1A1-213ENST00000511732 C9JCJ5 164 aa10.37□□□□□ -0.75
COL1A1-213ENST00000511732 GCGP01275 180 aa10.37□□□□□ -0.75
COL1A1-213ENST00000511732 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
COL1A1-213ENST00000511732 SERF2P84101 59 aa10.37□□□□□ -0.75
COL1A1-213ENST00000511732 DPPA3Q6W0C5 159 aa10.37□□□□□ -0.75
COL1A1-213ENST00000511732 EPDR1Q9UM22 224 aa10.37□□□□□ -0.75
COL1A1-213ENST00000511732 TNFSF18Q9UNG2 199 aa10.37□□□□□ -0.75
COL1A1-213ENST00000511732 MBP02144 154 aa10.36□□□□□ -0.75
COL1A1-213ENST00000511732 GIPP09681 153 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-213ENST00000511732 DNAH10OSP0CZ25 163 aa10.36□□□□□ -0.75
COL1A1-213ENST00000511732 FLI1Q01543 452 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-213ENST00000511732 RPL7L1Q6DKI1 246 aaKnown RBP10.36□□□□□ -0.75
COL1A1-213ENST00000511732 Q8N1X5 172 aa10.36□□□□□ -0.75
COL1A1-213ENST00000511732 TXNDC17Q9BRA2 123 aa10.36□□□□□ -0.75
COL1A1-213ENST00000511732 NDFIP1Q9BT67 221 aa10.36□□□□□ -0.75
COL1A1-213ENST00000511732 CXorf1O96002 111 aa10.35□□□□□ -0.75
COL1A1-213ENST00000511732 ZNF726P1Q15940 193 aa10.35□□□□□ -0.75
COL1A1-213ENST00000511732 ZNF876PQ49A33 203 aa10.35□□□□□ -0.75
COL1A1-213ENST00000511732 PRNTQ86SH4 94 aa10.35□□□□□ -0.75
COL1A1-213ENST00000511732 LINC00479Q96M42 142 aa10.35□□□□□ -0.75
COL1A1-213ENST00000511732 C9orf85Q96MD7 179 aa10.35□□□□□ -0.75
COL1A1-213ENST00000511732 ACTR3CQ9C0K3 210 aaPredicted RBP10.35□□□□□ -0.75
COL1A1-213ENST00000511732 TMEM167BQ9NRX6 74 aa10.35□□□□□ -0.75
COL1A1-213ENST00000511732 TRAV9-2A0A087WT02 112 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 A0A087WTM6 91 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 PGPEP1LA6NFU8 196 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 TAAR5O14804 337 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 RS1O15537 224 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 PFN1P07737 140 aaKnown RBP10.34□□□□□ -0.75
COL1A1-213ENST00000511732 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
COL1A1-213ENST00000511732 ERVFC1-1P60608 527 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 CFAP126Q5VTH2 177 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 NFE4Q86UQ8 179 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 CYB561D1Q8N8Q1 229 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 SLC25A29Q8N8R3 303 aa10.34□□□□□ -0.75
COL1A1-213ENST00000511732 FBLL1A6NHQ2 334 aaKnown RBP10.33□□□□□ -0.76
COL1A1-213ENST00000511732 G3V3Q6 166 aa10.33□□□□□ -0.76
COL1A1-213ENST00000511732 K7EQM0 130 aa10.33□□□□□ -0.76
COL1A1-213ENST00000511732 EVI2AP22794 236 aa10.33□□□□□ -0.76
COL1A1-213ENST00000511732 SMUG1Q53HV7 270 aa10.33□□□□□ -0.76
COL1A1-213ENST00000511732 NHLRC2Q8NBF2 726 aa10.33□□□□□ -0.76
COL1A1-213ENST00000511732 INO80EQ8NBZ0 244 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-213ENST00000511732 SCRT2Q9NQ03 307 aa10.33□□□□□ -0.76
COL1A1-213ENST00000511732 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
COL1A1-213ENST00000511732 MSRB1Q9NZV6 116 aa10.33□□□□□ -0.76
COL1A1-213ENST00000511732 FXYD6-FXYD2A0A087WZ82 144 aa10.32□□□□□ -0.76
COL1A1-213ENST00000511732 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
COL1A1-213ENST00000511732 TRAV34A0A0B4J273 112 aa10.32□□□□□ -0.76
COL1A1-213ENST00000511732 IGKV3D-20A0A0C4DH25 116 aa10.32□□□□□ -0.76
COL1A1-213ENST00000511732 A0A1W2PRE2 83 aa10.32□□□□□ -0.76
COL1A1-213ENST00000511732 K7EP13 123 aa10.32□□□□□ -0.76
COL1A1-213ENST00000511732 ZNF506Q5JVG8 444 aa10.32□□□□□ -0.76
COL1A1-213ENST00000511732 EREGO14944 169 aa10.31□□□□□ -0.76
COL1A1-213ENST00000511732 CRYGDP07320 174 aa10.31□□□□□ -0.76
COL1A1-213ENST00000511732 TIRAPP58753 221 aa10.31□□□□□ -0.76
COL1A1-213ENST00000511732 ZFP69Q49AA0 526 aa10.31□□□□□ -0.76
COL1A1-213ENST00000511732 IGHV3-38A0A0C4DH36 116 aa10.3□□□□□ -0.76
COL1A1-213ENST00000511732 CTXND1A0A1B0GTU2 59 aa10.3□□□□□ -0.76
COL1A1-213ENST00000511732 TRBV6-4A0A1B0GX49 114 aa10.3□□□□□ -0.76
COL1A1-213ENST00000511732 UBE2G2P60604 165 aa10.3□□□□□ -0.76
COL1A1-213ENST00000511732 SAPCD1Q5SSQ6 148 aa10.3□□□□□ -0.76
COL1A1-213ENST00000511732 SH2D6Q7Z4S9 175 aa10.3□□□□□ -0.76
COL1A1-213ENST00000511732 OR2T35Q8NGX2 323 aa10.3□□□□□ -0.76
COL1A1-213ENST00000511732 PTH2Q96A98 100 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms