RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 CNFNQ9BYD5 112 aa6.75□□□□□ -1.33
NR1I3-228ENST00000511676 TGIF2-C20orf24A0A0A6YYL0 155 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 C1orf196B1AJZ1 125 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 OR11H12B2RN74 326 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 F2Z2F3 143 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 H3BMM0 161 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 GPX1P07203 203 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 CTRLP40313 264 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 CDKN1BP46527 198 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 ZNF80P51504 273 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-228ENST00000511676 DEFB131AP59861 70 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 ODF3L2Q3SX64 289 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 TDRG1Q3Y452 100 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-228ENST00000511676 AMTNQ6UX39 209 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 KCNS1Q96KK3 526 aa6.74□□□□□ -1.33
NR1I3-228ENST00000511676 CMYA5Q8N3K9 4069 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 A0A1B0GXF2 115 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 C7orf71A4D174 169 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 HLA-DQA1P01909 254 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 IGLC6P0CF74 106 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
NR1I3-228ENST00000511676 RAB5BP61020 215 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 NUTF2P61970 127 aaKnown RBP6.73□□□□□ -1.33
NR1I3-228ENST00000511676 HBBP68871 147 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.73□□□□□ -1.33
NR1I3-228ENST00000511676 GATD1Q8NB37 220 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 BORCS7Q96B45 105 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 LINC00467Q9BRT7 94 aa6.73□□□□□ -1.33
NR1I3-228ENST00000511676 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
NR1I3-228ENST00000511676 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
NR1I3-228ENST00000511676 F6UB75 175 aa6.72□□□□□ -1.33
NR1I3-228ENST00000511676 OR5AL1P0C617 328 aa6.72□□□□□ -1.33
NR1I3-228ENST00000511676 RIGQ13278 110 aa6.72□□□□□ -1.33
NR1I3-228ENST00000511676 GTSF1Q8WW33 167 aa6.72□□□□□ -1.33
NR1I3-228ENST00000511676 IGHV4-4A0A075B6R2 117 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 SNAI2O43623 268 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 ZNF324O75467 553 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-228ENST00000511676 CA1P00915 261 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-228ENST00000511676 ORM1P02763 201 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 ZNF705DP0CH99 300 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-228ENST00000511676 ZNF705BP0CI00 300 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-228ENST00000511676 ACTL10Q5JWF8 245 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 GDF5OSQ5U4N7 250 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 MORN3Q6PF18 240 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-228ENST00000511676 TRPT1Q86TN4 253 aaKnown RBP6.71□□□□□ -1.34
NR1I3-228ENST00000511676 GTSCR1Q86UQ5 136 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 STHQ8IWL8 128 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 TMEM256Q8N2U0 113 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 FER1L6-AS1Q8NA97 138 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 MUC7Q8TAX7 377 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 SSBP4Q9BWG4 385 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-228ENST00000511676 C19orf73Q9NVV2 129 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 TP53TG3Q9ULZ0 132 aa6.71□□□□□ -1.34
NR1I3-228ENST00000511676 IGKV3D-20A0A0C4DH25 116 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 PHOX2AO14813 284 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 RNASE4P34096 147 aaKnown RBP6.7□□□□□ -1.34
NR1I3-228ENST00000511676 ASIPP42127 132 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 TCL1AP56279 114 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 KRTAP10-11P60412 298 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 CACNG7P62955 275 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 PRR9Q5T870 116 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 GFI1BQ5VTD9 330 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 FAM159AQ6UWV7 190 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 ZNF493Q6ZR52 646 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 TMEM136Q6ZRR5 245 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 C1QTNF4Q9BXJ3 329 aa6.7□□□□□ -1.34
NR1I3-228ENST00000511676 INSP01308 110 aa6.69□□□□□ -1.34
NR1I3-228ENST00000511676 PIK3CD-AS1Q5SR53 167 aa6.69□□□□□ -1.34
NR1I3-228ENST00000511676 ZNF575Q86XF7 245 aa6.69□□□□□ -1.34
NR1I3-228ENST00000511676 NDUFAF3Q9BU61 184 aa6.69□□□□□ -1.34
NR1I3-228ENST00000511676 SCRT2Q9NQ03 307 aa6.69□□□□□ -1.34
NR1I3-228ENST00000511676 C11orf21Q9P2W6 132 aa6.69□□□□□ -1.34
NR1I3-228ENST00000511676 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 KNCNA6PVL3 124 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 SNURFLB1AK76 121 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 NXPH4O95158 308 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 TRGC2P03986 189 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 DEFB1P60022 68 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 ANXA2RQ3ZCQ2 193 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
NR1I3-228ENST00000511676 LYZL1Q6UWQ5 148 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 FRZBQ92765 325 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 PTH2Q96A98 100 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 PGLYRP4Q96LB8 373 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 SELENOKQ9Y6D0 94 aa6.68□□□□□ -1.34
NR1I3-228ENST00000511676 IGHV1OR15-1A0A075B7D0 117 aa6.67□□□□□ -1.34
NR1I3-228ENST00000511676 KIR2DL5BA0A0G2JN68 375 aa6.67□□□□□ -1.34
NR1I3-228ENST00000511676 KIR2DL5BA0A0G2JPC4 375 aa6.67□□□□□ -1.34
NR1I3-228ENST00000511676 M0R2Z0 102 aa6.67□□□□□ -1.34
NR1I3-228ENST00000511676 CRXO43186 299 aaPredicted RBP6.67□□□□□ -1.34
NR1I3-228ENST00000511676 ARMS2P0C7Q2 107 aa6.67□□□□□ -1.34
NR1I3-228ENST00000511676 S100A4P26447 101 aaKnown RBP6.67□□□□□ -1.34
NR1I3-228ENST00000511676 SPINK13Q1W4C9 94 aa6.67□□□□□ -1.34
NR1I3-228ENST00000511676 COA6Q5JTJ3 125 aaKnown RBP6.67□□□□□ -1.34
NR1I3-228ENST00000511676 KIR2DL5AQ8N109 375 aa6.67□□□□□ -1.34
NR1I3-228ENST00000511676 KIR2DL5BQ8NHK3 375 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms