RNA–Protein interactions for RNA: ENST00000511598.5

RBM47-208, Transcript of RNA binding motif protein 47, human

TSL 2

Gene RBM47, Length 836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM47-208	ENST00000511598	S100A9	P06702	114 aa	Known RBP	13.85	□□□□□ -0.19
RBM47-208	ENST00000511598	RPL35	P42766	123 aa	Known RBP	13.85	□□□□□ -0.19
RBM47-208	ENST00000511598	EIF4E3	Q8N5X7	224 aa	Known RBP	13.85	□□□□□ -0.19
RBM47-208	ENST00000511598	C11orf52	Q96A22	123 aa		13.85	□□□□□ -0.19
RBM47-208	ENST00000511598	C16orf74	Q96GX8	76 aa		13.85	□□□□□ -0.19
RBM47-208	ENST00000511598	TP53TG3	Q9ULZ0	132 aa		13.85	□□□□□ -0.19
RBM47-208	ENST00000511598	ZFP30	Q9Y2G7	519 aa		13.85	□□□□□ -0.19
RBM47-208	ENST00000511598	ZNF506	Q5JVG8	444 aa		13.84	□□□□□ -0.19
RBM47-208	ENST00000511598	FAM159A	Q6UWV7	190 aa		13.84	□□□□□ -0.19
RBM47-208	ENST00000511598	BAGE2	Q86Y30	109 aa		13.84	□□□□□ -0.19
RBM47-208	ENST00000511598	DNAH10	Q8IVF4	4471 aa		13.84	□□□□□ -0.19
RBM47-208	ENST00000511598	TRBV6-1	A0A0K0K1D8	114 aa		13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	RAB19	A4D1S5	217 aa		13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	LTA	P01374	205 aa		13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	CEBPG	P53567	150 aa		13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	RAB14	P61106	215 aa		13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	DAD1	P61803	113 aa		13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	POM121L12	Q8N7R1	296 aa		13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	RNASE8	Q8TDE3	154 aa	Known RBP	13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	TMEM263	Q8WUH6	116 aa	Known RBP	13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	ZC2HC1A	Q96GY0	325 aa		13.83	□□□□□ -0.2
RBM47-208	ENST00000511598	ANXA2R	Q3ZCQ2	193 aa		13.82	□□□□□ -0.2
RBM47-208	ENST00000511598	ZNF493	Q6ZR52	646 aa		13.82	□□□□□ -0.2
RBM47-208	ENST00000511598	UBE2DNL	Q8IWF7	75 aa		13.82	□□□□□ -0.2
RBM47-208	ENST00000511598	FAM210A	Q96ND0	272 aa		13.82	□□□□□ -0.2
RBM47-208	ENST00000511598	NOP10	Q9NPE3	64 aa	Known RBP	13.82	□□□□□ -0.2
RBM47-208	ENST00000511598	PLAC8L1	A1L4L8	177 aa		13.81	□□□□□ -0.2
RBM47-208	ENST00000511598	SNURFL	B1AK76	121 aa		13.81	□□□□□ -0.2
RBM47-208	ENST00000511598	PFN1	P07737	140 aa	Known RBP	13.81	□□□□□ -0.2
RBM47-208	ENST00000511598	IFITM2	Q01629	132 aa		13.81	□□□□□ -0.2
RBM47-208	ENST00000511598	TMEM183A	Q8IXX5	376 aa		13.81	□□□□□ -0.2
RBM47-208	ENST00000511598	LINC00467	Q9BRT7	94 aa		13.81	□□□□□ -0.2
RBM47-208	ENST00000511598	GSN-AS1	Q9NRJ2	163 aa		13.81	□□□□□ -0.2
RBM47-208	ENST00000511598	DNAH6	Q9C0G6	4158 aa		13.81	□□□□□ -0.2
RBM47-208	ENST00000511598	FABP5P3	A8MUU1	101 aa		13.8	□□□□□ -0.2
RBM47-208	ENST00000511598	GNRH2	O43555	120 aa		13.8	□□□□□ -0.2
RBM47-208	ENST00000511598	ZNF674	Q2M3X9	581 aa		13.8	□□□□□ -0.2
RBM47-208	ENST00000511598	CENPW	Q5EE01	88 aa		13.8	□□□□□ -0.2
RBM47-208	ENST00000511598	FAM210B	Q96KR6	192 aa		13.8	□□□□□ -0.2
RBM47-208	ENST00000511598	C11orf21	Q9P2W6	132 aa		13.8	□□□□□ -0.2
RBM47-208	ENST00000511598	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM47-208	ENST00000511598		M0R2N4	97 aa		13.79	□□□□□ -0.2
RBM47-208	ENST00000511598	SH2D1A	O60880	128 aa		13.79	□□□□□ -0.2
RBM47-208	ENST00000511598	CRIP1	P50238	77 aa		13.79	□□□□□ -0.2
RBM47-208	ENST00000511598	SDF2L1	Q9HCN8	221 aa		13.79	□□□□□ -0.2
RBM47-208	ENST00000511598	ORM1	P02763	201 aa		13.78	□□□□□ -0.2
RBM47-208	ENST00000511598	DEFB130B	P0DP73	79 aa		13.78	□□□□□ -0.2
RBM47-208	ENST00000511598	DEFB130A	P0DP74	79 aa		13.78	□□□□□ -0.2
RBM47-208	ENST00000511598	MGST1	P10620	155 aa	Known RBP	13.78	□□□□□ -0.2
RBM47-208	ENST00000511598	GNG4	P50150	75 aa		13.78	□□□□□ -0.2
RBM47-208	ENST00000511598	FAM162B	Q5T6X4	162 aa		13.78	□□□□□ -0.2
RBM47-208	ENST00000511598	PRR27	Q6MZM9	219 aa		13.78	□□□□□ -0.2
RBM47-208	ENST00000511598	MDFIC	Q9P1T7	246 aa		13.78	□□□□□ -0.2
RBM47-208	ENST00000511598	TRGV11	A0A075B6L2	103 aa		13.77	□□□□□ -0.21
RBM47-208	ENST00000511598		M0R036	132 aa		13.77	□□□□□ -0.21
RBM47-208	ENST00000511598	ZNF415	Q09FC8	603 aa		13.77	□□□□□ -0.21
RBM47-208	ENST00000511598	TMEM88	Q6PEY1	159 aa		13.77	□□□□□ -0.21
RBM47-208	ENST00000511598	C11orf72	Q8NBR9	251 aa		13.77	□□□□□ -0.21
RBM47-208	ENST00000511598	KCNS1	Q96KK3	526 aa		13.77	□□□□□ -0.21
RBM47-208	ENST00000511598	PARL	Q9H300	379 aa		13.77	□□□□□ -0.21
RBM47-208	ENST00000511598	PGPEP1L	A6NFU8	196 aa		13.76	□□□□□ -0.21
RBM47-208	ENST00000511598	LYRM9	A8MSI8	78 aa		13.76	□□□□□ -0.21
RBM47-208	ENST00000511598	TMEM250	H0YL14	139 aa		13.76	□□□□□ -0.21
RBM47-208	ENST00000511598	TYMS	P04818	313 aa		13.76	□□□□□ -0.21
RBM47-208	ENST00000511598	COX8C	Q7Z4L0	72 aa		13.76	□□□□□ -0.21
RBM47-208	ENST00000511598	MLST8	Q9BVC4	326 aa		13.76	□□□□□ -0.21
RBM47-208	ENST00000511598	GAGE12B	A1L429	117 aa		13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	GAGE7	O76087	117 aa		13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	SRP19	P09132	144 aa	Known RBP	13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	GAGE12F	P0CL80	117 aa		13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	GAGE12G	P0CL81	117 aa		13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	GAGE12I	P0CL82	117 aa		13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	TCL1A	P56279	114 aa		13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	SRSF3	P84103	164 aa	Known RBP	13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	TDRG1	Q3Y452	100 aa		13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	IBA57	Q5T440	356 aa	Known RBP	13.75	□□□□□ -0.21
RBM47-208	ENST00000511598	TRBV20OR9-2	A0A075B6H5	130 aa		13.74	□□□□□ -0.21
RBM47-208	ENST00000511598	IGLV2-18	A0A075B6J9	118 aa		13.74	□□□□□ -0.21
RBM47-208	ENST00000511598	TMSB15B	A0A087X1C1	80 aa		13.74	□□□□□ -0.21
RBM47-208	ENST00000511598	TRGV1	A0A0A0MS02	117 aa		13.74	□□□□□ -0.21
RBM47-208	ENST00000511598	IGKV3D-20	A0A0C4DH25	116 aa		13.74	□□□□□ -0.21
RBM47-208	ENST00000511598	IGHV3-16	A0A0C4DH30	117 aa		13.74	□□□□□ -0.21
RBM47-208	ENST00000511598		B4DEV8	164 aa		13.74	□□□□□ -0.21
RBM47-208	ENST00000511598	PEA15	Q15121	130 aa		13.74	□□□□□ -0.21
RBM47-208	ENST00000511598	LINC00336	Q6ZUF6	198 aa		13.74	□□□□□ -0.21
RBM47-208	ENST00000511598	IGLV2-8	P01709	118 aa		13.73	□□□□□ -0.21
RBM47-208	ENST00000511598	DAZ2	Q13117	558 aa	Known RBP	13.73	□□□□□ -0.21
RBM47-208	ENST00000511598	CLLU1	Q5K131	121 aa		13.73	□□□□□ -0.21
RBM47-208	ENST00000511598		Q6ZTI0	123 aa		13.73	□□□□□ -0.21
RBM47-208	ENST00000511598	MRPL16	Q9NX20	251 aa	Known RBP	13.73	□□□□□ -0.21
RBM47-208	ENST00000511598	HECTD4	Q9Y4D8	3996 aa		13.73	□□□□□ -0.21
RBM47-208	ENST00000511598	GRIFIN	A4D1Z8	144 aa		13.72	□□□□□ -0.21
RBM47-208	ENST00000511598		C9JQL5	133 aa		13.72	□□□□□ -0.21
RBM47-208	ENST00000511598	OR5I1	Q13606	314 aa		13.72	□□□□□ -0.21
RBM47-208	ENST00000511598	KRBOX1	C9JBD0	128 aa		13.71	□□□□□ -0.21
RBM47-208	ENST00000511598		F5H768	121 aa		13.71	□□□□□ -0.21
RBM47-208	ENST00000511598	S100A4	P26447	101 aa	Known RBP	13.71	□□□□□ -0.21
RBM47-208	ENST00000511598	RPL19	P84098	196 aa	Known RBP	13.71	□□□□□ -0.21
RBM47-208	ENST00000511598	C15orf53	Q8NAA6	179 aa		13.71	□□□□□ -0.21
RBM47-208	ENST00000511598	DAZAP1	Q96EP5	407 aa	Known RBP	13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms