RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TRGV11A0A075B6L2 103 aa10.56□□□□□ -0.72
RAB40C-202ENST00000509637 ZNF80P51504 273 aaPredicted RBP10.56□□□□□ -0.72
RAB40C-202ENST00000509637 Q6ZSN1 163 aa10.56□□□□□ -0.72
RAB40C-202ENST00000509637 SLC25A29Q8N8R3 303 aa10.56□□□□□ -0.72
RAB40C-202ENST00000509637 PCNPQ8WW12 178 aaKnown RBP10.56□□□□□ -0.72
RAB40C-202ENST00000509637 SGK494Q96LW2 274 aa10.56□□□□□ -0.72
RAB40C-202ENST00000509637 TXNDC17Q9BRA2 123 aa10.56□□□□□ -0.72
RAB40C-202ENST00000509637 Q9HAA7 133 aa10.56□□□□□ -0.72
RAB40C-202ENST00000509637 PGPA6NDG6 321 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 C9JCJ5 164 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 FAM229AH3BQW9 127 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 UPK1BO75841 260 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 IGHV3-30P01768 117 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 IGHV3-33P01772 117 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 IGHV3-30-3P0DP02 117 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 IGHV3-30-5P0DP03 117 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 CSN1S1P47710 185 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 H2BFSP57053 126 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 GNG5P63218 68 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 UBE2L3P68036 154 aaKnown RBP10.55□□□□□ -0.72
RAB40C-202ENST00000509637 FFAR4Q5NUL3 377 aa10.55□□□□□ -0.72
RAB40C-202ENST00000509637 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 FAM240BA0A1B0GVZ2 78 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 RS1O15537 224 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 IFITM3Q01628 133 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 Q6ZSA8 131 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 GOLT1AQ6ZVE7 132 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 C10orf126Q8N4M7 172 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 NHLRC2Q8NBF2 726 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
RAB40C-202ENST00000509637 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 RPH3ALQ9UNE2 315 aa10.54□□□□□ -0.72
RAB40C-202ENST00000509637 KRTAP10-4P60372 401 aaPredicted RBP10.53□□□□□ -0.72
RAB40C-202ENST00000509637 CFAP126Q5VTH2 177 aa10.53□□□□□ -0.72
RAB40C-202ENST00000509637 MZT2BQ6NZ67 158 aa10.53□□□□□ -0.72
RAB40C-202ENST00000509637 TMEM75Q8N9X5 138 aa10.53□□□□□ -0.72
RAB40C-202ENST00000509637 SMIM3Q9BZL3 60 aa10.53□□□□□ -0.72
RAB40C-202ENST00000509637 NMES1Q9C002 83 aa10.53□□□□□ -0.72
RAB40C-202ENST00000509637 OTORQ9NRC9 128 aa10.53□□□□□ -0.72
RAB40C-202ENST00000509637 LRP1Q07954 4544 aaKnown RBP10.52□□□□□ -0.73
RAB40C-202ENST00000509637 PGPEP1LA6NFU8 196 aa10.52□□□□□ -0.73
RAB40C-202ENST00000509637 ASAH1Q13510 395 aa10.52□□□□□ -0.73
RAB40C-202ENST00000509637 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
RAB40C-202ENST00000509637 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
RAB40C-202ENST00000509637 ATP5SQ99766 215 aa10.52□□□□□ -0.73
RAB40C-202ENST00000509637 MBD2Q9UBB5 411 aa10.52□□□□□ -0.73
RAB40C-202ENST00000509637 HSPB11Q9Y547 144 aa10.52□□□□□ -0.73
RAB40C-202ENST00000509637 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
RAB40C-202ENST00000509637 HMGB3O15347 200 aaKnown RBP10.51□□□□□ -0.73
RAB40C-202ENST00000509637 PSCAO43653 123 aa10.51□□□□□ -0.73
RAB40C-202ENST00000509637 PPT1P50897 306 aa10.51□□□□□ -0.73
RAB40C-202ENST00000509637 C9orf85Q96MD7 179 aa10.51□□□□□ -0.73
RAB40C-202ENST00000509637 TREM1Q9NP99 234 aa10.51□□□□□ -0.73
RAB40C-202ENST00000509637 LECT2O14960 151 aa10.5□□□□□ -0.73
RAB40C-202ENST00000509637 IGLV2-11P01706 119 aa10.5□□□□□ -0.73
RAB40C-202ENST00000509637 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
RAB40C-202ENST00000509637 DEFA1P59665 94 aa10.5□□□□□ -0.73
RAB40C-202ENST00000509637 DEFA3P59666 94 aa10.5□□□□□ -0.73
RAB40C-202ENST00000509637 RAB2AP61019 212 aa10.5□□□□□ -0.73
RAB40C-202ENST00000509637 PPP1R1CQ8WVI7 109 aa10.5□□□□□ -0.73
RAB40C-202ENST00000509637 FBLL1A6NHQ2 334 aaKnown RBP10.49□□□□□ -0.73
RAB40C-202ENST00000509637 KRTAP29-1A8MX34 341 aaPredicted RBP10.49□□□□□ -0.73
RAB40C-202ENST00000509637 C17orf112F2Z3M2 114 aa10.49□□□□□ -0.73
RAB40C-202ENST00000509637 LINC00694P0DN24 101 aa10.49□□□□□ -0.73
RAB40C-202ENST00000509637 ZNF876PQ49A33 203 aa10.49□□□□□ -0.73
RAB40C-202ENST00000509637 KHDC3LQ587J8 217 aa10.49□□□□□ -0.73
RAB40C-202ENST00000509637 OR10J3Q5JRS4 329 aa10.49□□□□□ -0.73
RAB40C-202ENST00000509637 LELP1Q5T871 98 aa10.49□□□□□ -0.73
RAB40C-202ENST00000509637 SH2D6Q7Z4S9 175 aa10.49□□□□□ -0.73
RAB40C-202ENST00000509637 TRBV6-4A0A1B0GX49 114 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 J3QL48 77 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 MPC2O95563 127 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 C1QBP02746 253 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 PFN1P07737 140 aaKnown RBP10.48□□□□□ -0.73
RAB40C-202ENST00000509637 ZNF506Q5JVG8 444 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
RAB40C-202ENST00000509637 LINC00528Q8N1L1 170 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 ENKURQ8TC29 256 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 ASB13Q8WXK3 278 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 JPT2Q9H910 190 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 SDF2L1Q9HCN8 221 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
RAB40C-202ENST00000509637 KCNIP2Q9NS61 270 aa10.48□□□□□ -0.73
RAB40C-202ENST00000509637 ATP6V0E2Q8NHE4 81 aa10.47□□□□□ -0.73
RAB40C-202ENST00000509637 GTSF1LQ9H1H1 148 aa10.47□□□□□ -0.73
RAB40C-202ENST00000509637 TRAV8-6A0A0B4J262 113 aa10.46□□□□□ -0.73
RAB40C-202ENST00000509637 RPL12P30050 165 aaKnown RBP10.46□□□□□ -0.73
RAB40C-202ENST00000509637 ARL6IP6Q8N6S5 226 aa10.46□□□□□ -0.73
RAB40C-202ENST00000509637 CMTM2Q8TAZ6 248 aa10.46□□□□□ -0.73
RAB40C-202ENST00000509637 SAMD10Q9BYL1 202 aa10.46□□□□□ -0.73
RAB40C-202ENST00000509637 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.45□□□□□ -0.74
RAB40C-202ENST00000509637 TAS2R45P59539 299 aa10.45□□□□□ -0.74
RAB40C-202ENST00000509637 RHOHQ15669 191 aa10.45□□□□□ -0.74
RAB40C-202ENST00000509637 UFSP1Q6NVU6 142 aa10.45□□□□□ -0.74
RAB40C-202ENST00000509637 BAALCQ8WXS3 180 aa10.45□□□□□ -0.74
RAB40C-202ENST00000509637 KCNS1Q96KK3 526 aa10.45□□□□□ -0.74
RAB40C-202ENST00000509637 PRADC1Q9BSG0 188 aa10.45□□□□□ -0.74
RAB40C-202ENST00000509637 FAT3Q8TDW7 4589 aa10.45□□□□□ -0.74
RAB40C-202ENST00000509637 IGKV3D-20A0A0C4DH25 116 aa10.44□□□□□ -0.74
RAB40C-202ENST00000509637 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms