RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 IFI27P40305 119 aaPredicted RBP11.19□□□□□ -0.62
PHF3-209ENST00000509330 CTRLP40313 264 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 FAM104BQ5XKR9 115 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 EBLN2Q6P2I7 272 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 C2orf70A6NJV1 201 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 CKS2P33552 79 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 PKIAP61925 76 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 PRSS3P2Q8NHM4 247 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 M0R381 172 aa11.18□□□□□ -0.62
PHF3-209ENST00000509330 DPF1Q92782 380 aa11.18□□□□□ -0.62
PHF3-209ENST00000509330 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
PHF3-209ENST00000509330 PRELID3AQ96N28 172 aa11.18□□□□□ -0.62
PHF3-209ENST00000509330 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
PHF3-209ENST00000509330 GNRH2O43555 120 aa11.18□□□□□ -0.62
PHF3-209ENST00000509330 SPANXN1Q5VSR9 72 aa11.18□□□□□ -0.62
PHF3-209ENST00000509330 SETXQ7Z333 2677 aaKnown RBP11.18□□□□□ -0.62
PHF3-209ENST00000509330 S100A4P26447 101 aaKnown RBP11.17□□□□□ -0.62
PHF3-209ENST00000509330 ZNF124Q15973 351 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 MAJINQ3KP22 176 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 ANXA2RQ3ZCQ2 193 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 ADAMTSL5Q6ZMM2 481 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 MYOZ3Q8TDC0 251 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 OTOGQ6ZRI0 2925 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 TMEM89A2RUT3 159 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 NPYP01303 97 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 DDTP30046 118 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 ID1P41134 155 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
PHF3-209ENST00000509330 SPATA12Q7Z6I5 190 aa11.16□□□□□ -0.62
PHF3-209ENST00000509330 Q8N976 141 aa11.16□□□□□ -0.62
PHF3-209ENST00000509330 JMJD1CQ15652 2540 aa11.16□□□□□ -0.62
PHF3-209ENST00000509330 TRAV12-3A0A0B4J271 114 aa11.16□□□□□ -0.62
PHF3-209ENST00000509330 ZNF493Q6ZR52 646 aa11.16□□□□□ -0.62
PHF3-209ENST00000509330 ORMDL3Q8N138 153 aa11.16□□□□□ -0.62
PHF3-209ENST00000509330 PMCHL2Q9BQD1 86 aa11.16□□□□□ -0.62
PHF3-209ENST00000509330 A0A1B0GW15 77 aa11.16□□□□□ -0.62
PHF3-209ENST00000509330 FA2HQ7L5A8 372 aa11.16□□□□□ -0.62
PHF3-209ENST00000509330 DLX4Q92988 240 aaPredicted RBP11.16□□□□□ -0.62
PHF3-209ENST00000509330 TRAV21A0A0B4J279 112 aa11.15□□□□□ -0.62
PHF3-209ENST00000509330 LINC01619G3V211 115 aa11.15□□□□□ -0.62
PHF3-209ENST00000509330 Q8N2B8 174 aa11.15□□□□□ -0.62
PHF3-209ENST00000509330 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
PHF3-209ENST00000509330 SIGLEC8Q9NYZ4 499 aa11.15□□□□□ -0.62
PHF3-209ENST00000509330 LEPROTL1O95214 131 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 SNRPD3P62318 126 aaKnown RBP11.14□□□□□ -0.63
PHF3-209ENST00000509330 SPINK13Q1W4C9 94 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 RNF185Q96GF1 192 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 FOXC2Q99958 501 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 VAMP8Q9BV40 100 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 AP5S1Q9NUS5 200 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 CD5LO43866 347 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 CD28P10747 220 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 RAB4AP20338 218 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 DEFA6Q01524 100 aa11.14□□□□□ -0.63
PHF3-209ENST00000509330 HTN1P15515 57 aa11.13□□□□□ -0.63
PHF3-209ENST00000509330 FLNBO75369 2602 aaKnown RBP11.13□□□□□ -0.63
PHF3-209ENST00000509330 KNCNA6PVL3 124 aa11.13□□□□□ -0.63
PHF3-209ENST00000509330 REC114Q7Z4M0 266 aa11.13□□□□□ -0.63
PHF3-209ENST00000509330 TMEM191AQ9H0A3 160 aa11.13□□□□□ -0.63
PHF3-209ENST00000509330 K7EQG2 157 aa11.13□□□□□ -0.63
PHF3-209ENST00000509330 DNLZQ5SXM8 178 aa11.13□□□□□ -0.63
PHF3-209ENST00000509330 RNF152Q8N8N0 203 aa11.13□□□□□ -0.63
PHF3-209ENST00000509330 GATD1Q8NB37 220 aa11.13□□□□□ -0.63
PHF3-209ENST00000509330 FN1P02751 2386 aaKnown RBP11.12□□□□□ -0.63
PHF3-209ENST00000509330 DEFB104AQ8WTQ1 72 aa11.12□□□□□ -0.63
PHF3-209ENST00000509330 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
PHF3-209ENST00000509330 TEX43Q6ZNM6 134 aa11.12□□□□□ -0.63
PHF3-209ENST00000509330 TMEM61Q8N0U2 210 aa11.12□□□□□ -0.63
PHF3-209ENST00000509330 PHLDA3Q9Y5J5 127 aa11.12□□□□□ -0.63
PHF3-209ENST00000509330 BTF3P20290 206 aaKnown RBP11.11□□□□□ -0.63
PHF3-209ENST00000509330 DEFB131AP59861 70 aa11.11□□□□□ -0.63
PHF3-209ENST00000509330 OR9G4Q8NGQ1 327 aa11.11□□□□□ -0.63
PHF3-209ENST00000509330 C14orf144Q96I85 54 aa11.11□□□□□ -0.63
PHF3-209ENST00000509330 LGALS9O00182 355 aa11.11□□□□□ -0.63
PHF3-209ENST00000509330 ASIPP42127 132 aa11.11□□□□□ -0.63
PHF3-209ENST00000509330 DYNLRB2Q8TF09 96 aa11.11□□□□□ -0.63
PHF3-209ENST00000509330 C4orf3Q8WVX3 66 aa11.11□□□□□ -0.63
PHF3-209ENST00000509330 CITED2Q99967 270 aaPredicted RBP11.11□□□□□ -0.63
PHF3-209ENST00000509330 LENEPQ9Y5L5 61 aa11.11□□□□□ -0.63
PHF3-209ENST00000509330 C14orf178Q8N769 122 aaPredicted RBP11.1□□□□□ -0.63
PHF3-209ENST00000509330 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 CNFNQ9BYD5 112 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 A0A0J9YX75 114 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 CD7P09564 240 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 PRM2P04554 102 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 MGPP08493 103 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 SPATA45Q537H7 98 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 DMRTA1Q5VZB9 504 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 ZNF705AQ6ZN79 300 aaPredicted RBP11.1□□□□□ -0.63
PHF3-209ENST00000509330 RAX2Q96IS3 184 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 TMEM70Q9BUB7 260 aa11.1□□□□□ -0.63
PHF3-209ENST00000509330 TCTAP57738 103 aa11.09□□□□□ -0.63
PHF3-209ENST00000509330 APRG1Q8IVJ8 170 aa11.09□□□□□ -0.63
PHF3-209ENST00000509330 TMEM86BQ8N661 226 aa11.09□□□□□ -0.63
PHF3-209ENST00000509330 JPT2Q9H910 190 aa11.09□□□□□ -0.63
PHF3-209ENST00000509330 TP73-AS1Q9UF72 201 aa11.09□□□□□ -0.63
PHF3-209ENST00000509330 TNFRSF6BO95407 300 aa11.09□□□□□ -0.63
PHF3-209ENST00000509330 OR5AL1P0C617 328 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms